RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 LMNB1P20700 586 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 U2AF1Q01081 240 aaKnown RBP eCLIP8.59□□□□□ -1.03
SDF2-205ENST00000587629 PRR5LQ6MZQ0 368 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 MCM10Q7L590 875 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 RSPH6AQ9H0K4 717 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 USP16Q9Y5T5 823 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 NPC1L1Q9UHC9 1359 aa8.59□□□□□ -1.03
SDF2-205ENST00000587629 AFDNP55196 1824 aaKnown RBP8.59□□□□□ -1.03
SDF2-205ENST00000587629 NFKBIEO00221 500 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 CAMTA2O94983 1202 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 PDE6BP35913 854 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 IL6STP40189 918 aaPredicted RBP8.58□□□□□ -1.04
SDF2-205ENST00000587629 FSTL1Q12841 308 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 DCTN1Q14203 1278 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 DZIP3Q86Y13 1208 aaKnown RBP8.58□□□□□ -1.04
SDF2-205ENST00000587629 SETDB2Q96T68 719 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 BRIP1Q9BX63 1249 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 NUDCQ9Y266 331 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 UBR2Q8IWV8 1755 aa8.58□□□□□ -1.04
SDF2-205ENST00000587629 GLTPD2A6NH11 291 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 PPP2R1AP30153 589 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 RTF1Q92541 710 aaKnown RBP8.57□□□□□ -1.04
SDF2-205ENST00000587629 MIS18AQ9NYP9 233 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 CEMIPQ8WUJ3 1361 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 NRXN2Q9P2S2 1712 aa8.57□□□□□ -1.04
SDF2-205ENST00000587629 SBF1O95248 1867 aa8.56□□□□□ -1.04
SDF2-205ENST00000587629 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
SDF2-205ENST00000587629 VEGFAP15692 232 aaPredicted RBP8.56□□□□□ -1.04
SDF2-205ENST00000587629 ST5P78524 1137 aa8.56□□□□□ -1.04
SDF2-205ENST00000587629 ERFEQ4G0M1 354 aa8.56□□□□□ -1.04
SDF2-205ENST00000587629 SMC1BQ8NDV3 1235 aa8.56□□□□□ -1.04
SDF2-205ENST00000587629 KLRG1Q96E93 195 aa8.56□□□□□ -1.04
SDF2-205ENST00000587629 DPY19L2Q6NUT2 758 aa8.55□□□□□ -1.04
SDF2-205ENST00000587629 PRPF40BQ6NWY9 871 aaKnown RBP8.55□□□□□ -1.04
SDF2-205ENST00000587629 NBPF5PQ86XG9 351 aaPredicted RBP8.55□□□□□ -1.04
SDF2-205ENST00000587629 NGEFQ8N5V2 710 aa8.55□□□□□ -1.04
SDF2-205ENST00000587629 SIPA1L3O60292 1781 aaPredicted RBP8.54□□□□□ -1.04
SDF2-205ENST00000587629 SPDYE2BA6NHP3 402 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 POTECB2RU33 542 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 NBPF26B4DH59 902 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 SPDYE6P0CI01 402 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 SRGNP10124 158 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 SPDYE2Q495Y8 402 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 NBPF10Q6P3W6 841 aaKnown RBP8.54□□□□□ -1.04
SDF2-205ENST00000587629 NBPF15Q8N660 670 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 CNKSR1Q969H4 720 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
SDF2-205ENST00000587629 WDR90Q96KV7 1748 aa8.54□□□□□ -1.04
SDF2-205ENST00000587629 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
SDF2-205ENST00000587629 ANKRD31Q8N7Z5 1873 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 DLEC1Q9Y238 1755 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 DDNO94850 711 aaPredicted RBP8.53□□□□□ -1.04
SDF2-205ENST00000587629 TAF7Q15545 349 aaPredicted RBP8.53□□□□□ -1.04
SDF2-205ENST00000587629 STYK1Q6J9G0 422 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 OLFM4Q6UX06 510 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 SPDYE1Q8NFV5 336 aaPredicted RBP8.53□□□□□ -1.04
SDF2-205ENST00000587629 MASTLQ96GX5 879 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 TAOK3Q9H2K8 898 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 PDZRN3Q9UPQ7 1066 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 SCN7AQ01118 1682 aa8.53□□□□□ -1.04
SDF2-205ENST00000587629 TNRC6CQ9HCJ0 1690 aaKnown RBP8.53□□□□□ -1.04
SDF2-205ENST00000587629 COL11A2P13942 1736 aaPredicted RBP8.52□□□□□ -1.05
SDF2-205ENST00000587629 POTEIP0CG38 1075 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 POTEJP0CG39 1038 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
SDF2-205ENST00000587629 HLFQ16534 295 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 COL13A1Q5TAT6 717 aaPredicted RBP8.52□□□□□ -1.05
SDF2-205ENST00000587629 CHADLQ6NUI6 762 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 CLEC4GQ6UXB4 293 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 TPTE2Q6XPS3 522 aa8.52□□□□□ -1.05
SDF2-205ENST00000587629 THUMPD2Q9BTF0 503 aaKnown RBP8.52□□□□□ -1.05
SDF2-205ENST00000587629 RRP7AQ9Y3A4 280 aaKnown RBP8.52□□□□□ -1.05
SDF2-205ENST00000587629 TIAM2Q8IVF5 1701 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 CCDC88AQ3V6T2 1871 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 HTATSF1O43719 755 aaKnown RBP8.51□□□□□ -1.05
SDF2-205ENST00000587629 NEFMP07197 916 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 MYL6BP14649 208 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 NPR1P16066 1061 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 JMYQ8N9B5 988 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 ZNF277Q9NRM2 450 aaPredicted RBP8.51□□□□□ -1.05
SDF2-205ENST00000587629 SLX4Q8IY92 1834 aa8.51□□□□□ -1.05
SDF2-205ENST00000587629 GPTP24298 496 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 CCDC93Q567U6 631 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 SOGA3Q5TF21 947 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 C7orf43Q8WVR3 580 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 LTBP3Q9NS15 1303 aa8.5□□□□□ -1.05
SDF2-205ENST00000587629 BCORQ6W2J9 1755 aa8.49□□□□□ -1.05
SDF2-205ENST00000587629 TCERG1O14776 1098 aaKnown RBP8.49□□□□□ -1.05
SDF2-205ENST00000587629 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
SDF2-205ENST00000587629 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
SDF2-205ENST00000587629 MKRN1Q9UHC7 482 aaKnown RBP8.49□□□□□ -1.05
SDF2-205ENST00000587629 PCNTO95613 3336 aa8.49□□□□□ -1.05
SDF2-205ENST00000587629 CACNA1SQ13698 1873 aa8.49□□□□□ -1.05
SDF2-205ENST00000587629 KLRG2A4D1S0 409 aaPredicted RBP8.48□□□□□ -1.05
SDF2-205ENST00000587629 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
SDF2-205ENST00000587629 FKBP4Q02790 459 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms