RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 KDRP35968 1356 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 KIF13AQ9H1H9 1805 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 AACSQ86V21 672 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 LGR6Q9HBX8 967 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 SOS1Q07889 1333 aaPredicted RBP13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 MYL6BP14649 208 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 ZNF592Q92610 1267 aa13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 ZNF330Q9Y3S2 320 aaPredicted RBP13.34□□□□□ -0.27
RUNDC3A-203ENST00000587483 IGSF1Q8N6C5 1336 aa13.33□□□□□ -0.27
RUNDC3A-203ENST00000587483 KDM4AO75164 1064 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 RPAP1Q9BWH6 1393 aaPredicted RBP13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 GJB2P29033 226 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 LRRC59Q96AG4 307 aaKnown RBP13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 PDRG1Q9NUG6 133 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 TNRQ92752 1358 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 STX6O43752 255 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 CWF19L2Q2TBE0 894 aaKnown RBP13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 IL17REQ8NFR9 667 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 KLHDC4Q8TBB5 520 aa13.33□□□□□ -0.28
RUNDC3A-203ENST00000587483 ADAMTS13Q76LX8 1427 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 TMEM2Q9UHN6 1383 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 A0A0G2JS52 829 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 SYT1P21579 422 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 ZKSCAN1P17029 563 aaPredicted RBP13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 SSH3Q8TE77 659 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 FSD1Q9BTV5 496 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 SNX14Q9Y5W7 946 aa13.32□□□□□ -0.28
RUNDC3A-203ENST00000587483 IL17RAQ96F46 866 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 RAD50Q92878 1312 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 ZNF530Q6P9A1 599 aaPredicted RBP13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 BICD2Q8TD16 824 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 SGSM2O43147 1006 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 LTKP29376 864 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
RUNDC3A-203ENST00000587483 AOX1Q06278 1338 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 BTBD11A6QL63 1104 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 LARGE1O95461 756 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 PSME1Q06323 249 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 G3BP1Q13283 466 aaKnown RBP eCLIP13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 SASS6Q6UVJ0 657 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 LIMCH1Q9UPQ0 1083 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 CACNA1FO60840 1977 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 CBX1P83916 185 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 CYP46A1Q9Y6A2 500 aa13.3□□□□□ -0.28
RUNDC3A-203ENST00000587483 ZSCAN22P10073 491 aaPredicted RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 ADCK5Q3MIX3 580 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 RUFY3Q7L099 469 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 DNAJC2Q99543 621 aaKnown RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 LRRC37A3O60309 1634 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 IGSF3O75054 1194 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 PTH1RQ03431 593 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 CCDC183Q5T5S1 534 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 DNAAF4Q8WXU2 420 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 EDC3Q96F86 508 aaKnown RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 LSG1Q9H089 658 aaKnown RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 CHAF1AQ13111 956 aaPredicted RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 ESCO1Q5FWF5 840 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 GPATCH3Q96I76 525 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 TTC14Q96N46 770 aa13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 RGPD8O14715 1765 aaPredicted RBP13.29□□□□□ -0.28
RUNDC3A-203ENST00000587483 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 HTATSF1O43719 755 aaKnown RBP13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 MAP3K2Q9Y2U5 619 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 MAP3K5Q99683 1374 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 NPHP1O15259 732 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 C1orf141Q5JVX7 400 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 RIC3Q7Z5B4 369 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 RUFY2Q8WXA3 655 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 ATP6V1DQ9Y5K8 247 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 PRAMEF22A3QJZ6 481 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 H3BQV1 296 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 IFFO2Q5TF58 517 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 FAM184AQ8NB25 1140 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 TMEM87AQ8NBN3 555 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
RUNDC3A-203ENST00000587483 ZHX1Q9UKY1 873 aaPredicted RBP13.27□□□□□ -0.28
RUNDC3A-203ENST00000587483 PTPRUQ92729 1446 aa13.27□□□□□ -0.28
RUNDC3A-203ENST00000587483 POLA2Q14181 598 aa13.27□□□□□ -0.29
RUNDC3A-203ENST00000587483 N4BP2Q86UW6 1770 aaPredicted RBP13.27□□□□□ -0.29
RUNDC3A-203ENST00000587483 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
RUNDC3A-203ENST00000587483 PXDNLA1KZ92 1463 aa13.27□□□□□ -0.29
RUNDC3A-203ENST00000587483 SLC39A6Q13433 755 aa13.27□□□□□ -0.29
RUNDC3A-203ENST00000587483 F13A1P00488 732 aa13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 HOXC9P31274 260 aa13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 GUCY1B3Q02153 619 aa13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 NOLC1Q14978 699 aaKnown RBP eCLIP13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 THEMISQ8N1K5 641 aaPredicted RBP13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 UBE2HP62256 183 aa13.26□□□□□ -0.29
RUNDC3A-203ENST00000587483 NEUROD6Q96NK8 337 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms