RNA–Protein interactions for RNA: ENST00000587303.5

PTPRS-204, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRS, Length 6,353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-204ENST00000587303 BCCIPQ9P287 314 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPRS-204ENST00000587303 CKAP2LQ8IYA6 745 aa15.86■□□□□ 0.13
PTPRS-204ENST00000587303 MAP2K1Q02750 393 aaPredicted RBP15.86■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC178Q5BJE1 867 aa15.86■□□□□ 0.13
PTPRS-204ENST00000587303 MAP3K2Q9Y2U5 619 aa15.86■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC83Q8IWF9 413 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 PHAXQ9H814 394 aaKnown RBP15.85■□□□□ 0.13
PTPRS-204ENST00000587303 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 PPFIA3O75145 1194 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC152Q4G0S7 254 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 BIN2Q9UBW5 565 aaPredicted RBP15.85■□□□□ 0.13
PTPRS-204ENST00000587303 GSTO1P78417 241 aa15.85■□□□□ 0.13
PTPRS-204ENST00000587303 FERMT3Q86UX7 667 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 BICD1Q96G01 975 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 CFAP100Q494V2 611 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 C8orf76Q96K31 380 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
PTPRS-204ENST00000587303 TTF1Q15361 905 aaPredicted RBP15.84■□□□□ 0.13
PTPRS-204ENST00000587303 SPA17Q15506 151 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 SYCP3Q8IZU3 236 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 SNRKQ9NRH2 765 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 VPS36Q86VN1 386 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
PTPRS-204ENST00000587303 PUF60Q9UHX1 559 aaKnown RBP15.84■□□□□ 0.13
PTPRS-204ENST00000587303 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 PLS1Q14651 629 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC91Q7Z6B0 441 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 VEZTQ9HBM0 779 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 PARP3Q9Y6F1 533 aa15.84■□□□□ 0.13
PTPRS-204ENST00000587303 GSTTP1A0A1W2PQM5 241 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 CTNNA2P26232 953 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 TICAM2Q86XR7 235 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 ERLIN1O75477 346 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 KIF5BP33176 963 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 USP8P40818 1118 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 GOLIM4O00461 696 aa15.83■□□□□ 0.12
PTPRS-204ENST00000587303 FGFR1OPO95684 399 aaKnown RBP15.82■□□□□ 0.12
PTPRS-204ENST00000587303 KIF20AO95235 890 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 C20orf194Q5TEA3 1177 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 CEP63Q96MT8 703 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 PICALMQ13492 652 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 ARHGAP29Q52LW3 1261 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 FBLN1P23142 703 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 CALML4Q96GE6 196 aa15.82■□□□□ 0.12
PTPRS-204ENST00000587303 CRNKL1Q9BZJ0 848 aaKnown RBP15.82■□□□□ 0.12
PTPRS-204ENST00000587303 CETN1Q12798 172 aa15.81■□□□□ 0.12
PTPRS-204ENST00000587303 DDB1Q16531 1140 aa15.81■□□□□ 0.12
PTPRS-204ENST00000587303 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 PABPN1LA6NDY0 278 aaKnown RBP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 LMOD1P29536 600 aaPredicted RBP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 ZCRB1Q8TBF4 217 aaKnown RBP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 TCERG1LQ5VWI1 586 aa15.81■□□□□ 0.12
PTPRS-204ENST00000587303 EIF3JO75822 258 aaKnown RBP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 RAB11FIP4Q86YS3 637 aa15.81■□□□□ 0.12
PTPRS-204ENST00000587303 HMGB1P09429 215 aaKnown RBP15.81■□□□□ 0.12
PTPRS-204ENST00000587303 TMEM67Q5HYA8 995 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 UBE3BQ7Z3V4 1068 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 ZNF354CQ86Y25 554 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 TTC21AQ8NDW8 1320 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 CCT2P78371 535 aaKnown RBP15.8■□□□□ 0.12
PTPRS-204ENST00000587303 SNRPA1P09661 255 aaKnown RBP15.8■□□□□ 0.12
PTPRS-204ENST00000587303 TSHZ3Q63HK5 1081 aa15.8■□□□□ 0.12
PTPRS-204ENST00000587303 UQCRHLA0A096LP55 91 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 UQCRHP07919 91 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 STXBP4Q6ZWJ1 553 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 CCDC148Q8NFR7 591 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 INCENPQ9NQS7 918 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 IDEP14735 1019 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 MFSD6Q6ZSS7 791 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 STX8Q9UNK0 236 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 CPLX3Q8WVH0 158 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 TCP11L1Q9NUJ3 509 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 TSPY3P0CV98 308 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 TSPY8P0CW00 308 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 GRIPAP1Q4V328 841 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 SMARCC1Q92922 1105 aaPredicted RBP15.79■□□□□ 0.12
PTPRS-204ENST00000587303 MMRN2Q9H8L6 949 aa15.79■□□□□ 0.12
PTPRS-204ENST00000587303 EFCAB5A4FU69 1503 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 HOOK3Q86VS8 718 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 HOMER2Q9NSB8 354 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 IDI1Q13907 227 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 SMC1AQ14683 1233 aaKnown RBP15.78■□□□□ 0.12
PTPRS-204ENST00000587303 TDRD12Q587J7 1177 aaKnown RBP15.78■□□□□ 0.12
PTPRS-204ENST00000587303 IL27Q8NEV9 243 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 IQSEC3Q9UPP2 1182 aaPredicted RBP15.78■□□□□ 0.12
PTPRS-204ENST00000587303 PRC1O43663 620 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 HAND2P61296 217 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 UTP14AQ9BVJ6 771 aaKnown RBP15.78■□□□□ 0.12
PTPRS-204ENST00000587303 TIAM1Q13009 1591 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 STAMBPO95630 424 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 GIMAP7Q8NHV1 300 aa15.78■□□□□ 0.12
PTPRS-204ENST00000587303 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
PTPRS-204ENST00000587303 NIP7Q9Y221 180 aaKnown RBP eCLIP15.77■□□□□ 0.121e-6■□□□□ 10.1
PTPRS-204ENST00000587303 IFFO1Q0D2I5 559 aa15.77■□□□□ 0.12
PTPRS-204ENST00000587303 CCDC40Q4G0X9 1142 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms