RNA–Protein interactions for RNA: ENST00000587228.5

GPATCH8-205, Transcript of G-patch domain containing 8, humanhuman

TSL 1 (best)

Gene GPATCH8, Length 4,713 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH8-205ENST00000587228 CCDC192P0DO97 292 aa11.41□□□□□ -0.58
GPATCH8-205ENST00000587228 RAB11FIP4Q86YS3 637 aa11.41□□□□□ -0.58
GPATCH8-205ENST00000587228 MNS1Q8NEH6 495 aa11.41□□□□□ -0.58
GPATCH8-205ENST00000587228 PDCL3Q9H2J4 239 aa11.41□□□□□ -0.58
GPATCH8-205ENST00000587228 ATP2B3Q16720 1220 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 DCAF5Q96JK2 942 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 FEZ1Q99689 392 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 ABCC1P33527 1531 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 CCDC196A0A1B0GTZ2 297 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 HELBQ8NG08 1087 aaPredicted RBP11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 RNF41Q9H4P4 317 aaPredicted RBP11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 PA2G4Q9UQ80 394 aaKnown RBP11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 MAPKBP1O60336 1514 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 CCDC144CPQ8IYA2 1237 aa11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 RTCBQ9Y3I0 505 aaKnown RBP11.4□□□□□ -0.58
GPATCH8-205ENST00000587228 CFAP65Q6ZU64 1925 aaKnown RBP11.4□□□□□ -0.59
GPATCH8-205ENST00000587228 BAG3O95817 575 aa11.4□□□□□ -0.59
GPATCH8-205ENST00000587228 ATP10AO60312 1499 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 UHRF1BP1Q6BDS2 1440 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 GOLGA8BA8MQT2 603 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 C8orf76Q96K31 380 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 VAT1LQ9HCJ6 419 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 TTF1Q15361 905 aaPredicted RBP11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 SYCP1Q15431 976 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 TNNQ9UQP3 1299 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 TSPY2A6NKD2 308 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 ARHGAP45Q92619 1136 aa11.39□□□□□ -0.59
GPATCH8-205ENST00000587228 TBC1D9Q6ZT07 1266 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 TRMT1LQ7Z2T5 733 aaKnown RBP11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 LINS1Q8NG48 757 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 PUS7Q96PZ0 661 aaKnown RBP11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 PCDHB15Q9Y5E8 787 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 TCOF1Q13428 1488 aaKnown RBP11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 GOLGA8AA7E2F4 631 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 FAM43AQ8N2R8 423 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 PAF1Q8N7H5 531 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 TPTE2Q6XPS3 522 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 MICU3Q86XE3 530 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 MRPL50Q8N5N7 158 aaKnown RBP11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 FBXO3Q9UK99 471 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 STX8Q9UNK0 236 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 ALDH1L1O75891 902 aa11.38□□□□□ -0.59
GPATCH8-205ENST00000587228 MYCNP04198 464 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 HMGB1P09429 215 aaKnown RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 GPS2Q13227 327 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 SMARCE1Q969G3 411 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 UTP14AQ9BVJ6 771 aaKnown RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 NUP62CLQ9H1M0 184 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.37□□□□□ -0.592e-6■■■■■ 109.6
GPATCH8-205ENST00000587228 VAMP4O75379 141 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 PHAXQ9H814 394 aaKnown RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 SLAIN2Q9P270 581 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 POLR3AO14802 1390 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 RNMTO43148 476 aaKnown RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 UQCRFS1P1P0C7P4 283 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 LTKP29376 864 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 CATIPQ7Z7H3 387 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 CEP57L1Q8IYX8 460 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 CAGE1Q8TC20 777 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 LIMCH1Q9UPQ0 1083 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 TRPM2O94759 1503 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 GNPATO15228 680 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 WDHD1O75717 1129 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 CAMK4Q16566 473 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 TMEM67Q5HYA8 995 aa11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 SPTY2D1Q68D10 685 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 CIZ1Q9ULV3 898 aaPredicted RBP11.37□□□□□ -0.59
GPATCH8-205ENST00000587228 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 CYP7A1P22680 504 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 MCM4P33991 863 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 TCEANC2Q96MN5 208 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 ZNHIT6Q9NWK9 470 aaKnown RBP11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 CCDC39Q9UFE4 941 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 BMP2KLQ5H9B9 411 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 MFSD6Q6ZSS7 791 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 DACH1Q9UI36 760 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 PARD3Q8TEW0 1356 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 CEP170Q5SW79 1584 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 IRS4O14654 1257 aaPredicted RBP11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 MATR3P43243 847 aaKnown RBP eCLIP11.36□□□□□ -0.592e-7■■■□□ 14.9
GPATCH8-205ENST00000587228 PDE4BQ07343 736 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 USP16Q9Y5T5 823 aa11.36□□□□□ -0.59
GPATCH8-205ENST00000587228 IL15P40933 162 aaPredicted RBP11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 NLRP5P59047 1200 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 PPFIBP1Q86W92 1011 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 ANKRD44Q8N8A2 993 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 CABP5Q9NP86 173 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 PCDH11XQ9BZA7 1347 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 PCDH11YQ9BZA8 1340 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 CCDC194A0A1B0GVG4 234 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 HLA-DOAP06340 250 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 TTC22Q5TAA0 569 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 CCDC173Q0VFZ6 552 aa11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 C16orf71Q8IYS4 520 aaPredicted RBP11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 ZC3H12CQ9C0D7 883 aaKnown RBP11.35□□□□□ -0.59
GPATCH8-205ENST00000587228 DEF6Q9H4E7 631 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms