RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 NBPF10Q6P3W6 841 aaKnown RBP18.63■□□□□ 0.57
ATG4D-206ENST00000586863 NBPF15Q8N660 670 aa18.63■□□□□ 0.57
ATG4D-206ENST00000586863 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
ATG4D-206ENST00000586863 MIS18AQ9NYP9 233 aa18.62■□□□□ 0.57
ATG4D-206ENST00000586863 ZNF219Q9P2Y4 722 aaPredicted RBP18.62■□□□□ 0.57
ATG4D-206ENST00000586863 NPHP1O15259 732 aa18.61■□□□□ 0.57
ATG4D-206ENST00000586863 C21orf2O43822 256 aa18.61■□□□□ 0.57
ATG4D-206ENST00000586863 ST5P78524 1137 aa18.61■□□□□ 0.57
ATG4D-206ENST00000586863 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
ATG4D-206ENST00000586863 CLEC4GQ6UXB4 293 aa18.6■□□□□ 0.57
ATG4D-206ENST00000586863 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
ATG4D-206ENST00000586863 GLTPD2A6NH11 291 aa18.59■□□□□ 0.57
ATG4D-206ENST00000586863 FSTL1Q12841 308 aa18.59■□□□□ 0.57
ATG4D-206ENST00000586863 DNAJC5GQ8N7S2 189 aa18.59■□□□□ 0.57
ATG4D-206ENST00000586863 ZNF652Q9Y2D9 606 aa18.59■□□□□ 0.57
ATG4D-206ENST00000586863 SRGNP10124 158 aa18.58■□□□□ 0.56
ATG4D-206ENST00000586863 HTRA3P83110 453 aa18.58■□□□□ 0.56
ATG4D-206ENST00000586863 STYK1Q6J9G0 422 aa18.58■□□□□ 0.56
ATG4D-206ENST00000586863 PRPF40BQ6NWY9 871 aaKnown RBP18.58■□□□□ 0.56
ATG4D-206ENST00000586863 NBPF5PQ86XG9 351 aaPredicted RBP18.58■□□□□ 0.56
ATG4D-206ENST00000586863 NEFMP07197 916 aa18.57■□□□□ 0.56
ATG4D-206ENST00000586863 CNKSR1Q969H4 720 aa18.57■□□□□ 0.56
ATG4D-206ENST00000586863 THUMPD2Q9BTF0 503 aaKnown RBP18.57■□□□□ 0.56
ATG4D-206ENST00000586863 NUP98P52948 1817 aa18.57■□□□□ 0.56
ATG4D-206ENST00000586863 NFE2L2Q16236 605 aa18.56■□□□□ 0.56
ATG4D-206ENST00000586863 MASTLQ96GX5 879 aa18.56■□□□□ 0.56
ATG4D-206ENST00000586863 NIP7Q9Y221 180 aaKnown RBP eCLIP18.56■□□□□ 0.56
ATG4D-206ENST00000586863 LTBP3Q9NS15 1303 aa18.55■□□□□ 0.56
ATG4D-206ENST00000586863 RGL2O15211 777 aa18.55■□□□□ 0.56
ATG4D-206ENST00000586863 HLFQ16534 295 aa18.55■□□□□ 0.56
ATG4D-206ENST00000586863 TAOK3Q9H2K8 898 aa18.55■□□□□ 0.56
ATG4D-206ENST00000586863 VEGFAP15692 232 aaPredicted RBP18.54■□□□□ 0.56
ATG4D-206ENST00000586863 EIF4A1P60842 406 aaKnown RBP18.54■□□□□ 0.56
ATG4D-206ENST00000586863 ERFEQ4G0M1 354 aa18.54■□□□□ 0.56
ATG4D-206ENST00000586863 SMC1BQ8NDV3 1235 aa18.54■□□□□ 0.56
ATG4D-206ENST00000586863 PNISRQ8TF01 805 aaKnown RBP18.54■□□□□ 0.56
ATG4D-206ENST00000586863 FAM177BA6PVY3 158 aa18.53■□□□□ 0.56
ATG4D-206ENST00000586863 POTECB2RU33 542 aa18.53■□□□□ 0.56
ATG4D-206ENST00000586863 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
ATG4D-206ENST00000586863 KLRG2A4D1S0 409 aaPredicted RBP18.52■□□□□ 0.56
ATG4D-206ENST00000586863 IFFO2Q5TF58 517 aa18.52■□□□□ 0.56
ATG4D-206ENST00000586863 TPTE2Q6XPS3 522 aa18.52■□□□□ 0.56
ATG4D-206ENST00000586863 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
ATG4D-206ENST00000586863 C7orf43Q8WVR3 580 aa18.52■□□□□ 0.56
ATG4D-206ENST00000586863 NPR1P16066 1061 aa18.51■□□□□ 0.55
ATG4D-206ENST00000586863 SOGA3Q5TF21 947 aa18.51■□□□□ 0.55
ATG4D-206ENST00000586863 ABCC12Q96J65 1359 aa18.51■□□□□ 0.55
ATG4D-206ENST00000586863 DPY19L2Q6NUT2 758 aa18.5■□□□□ 0.55
ATG4D-206ENST00000586863 TTLL7Q6ZT98 887 aa18.5■□□□□ 0.55
ATG4D-206ENST00000586863 KLRG1Q96E93 195 aa18.5■□□□□ 0.55
ATG4D-206ENST00000586863 CCDC93Q567U6 631 aa18.49■□□□□ 0.55
ATG4D-206ENST00000586863 OLFM4Q6UX06 510 aa18.49■□□□□ 0.55
ATG4D-206ENST00000586863 PNNQ9H307 717 aaKnown RBP18.49■□□□□ 0.55
ATG4D-206ENST00000586863 RRP7AQ9Y3A4 280 aaKnown RBP18.49■□□□□ 0.55
ATG4D-206ENST00000586863 MAP3K15Q6ZN16 1313 aa18.49■□□□□ 0.55
ATG4D-206ENST00000586863 ERVV-1B6SEH8 477 aa18.48■□□□□ 0.55
ATG4D-206ENST00000586863 MYL6BP14649 208 aa18.48■□□□□ 0.55
ATG4D-206ENST00000586863 RALBP1Q15311 655 aa18.47■□□□□ 0.55
ATG4D-206ENST00000586863 KIF6Q6ZMV9 814 aa18.47■□□□□ 0.55
ATG4D-206ENST00000586863 NUTM1Q86Y26 1132 aa18.47■□□□□ 0.55
ATG4D-206ENST00000586863 TSPYL4Q9UJ04 414 aa18.47■□□□□ 0.55
ATG4D-206ENST00000586863 UBN2Q6ZU65 1347 aa18.47■□□□□ 0.55
ATG4D-206ENST00000586863 DDNO94850 711 aaPredicted RBP18.46■□□□□ 0.55
ATG4D-206ENST00000586863 GTF2E1P29083 439 aaPredicted RBP18.46■□□□□ 0.55
ATG4D-206ENST00000586863 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
ATG4D-206ENST00000586863 GPTP24298 496 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 RIPK4P57078 832 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 FKBP4Q02790 459 aaKnown RBP eCLIP18.45■□□□□ 0.54
ATG4D-206ENST00000586863 JMYQ8N9B5 988 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 NYXQ9GZU5 481 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 ZNF277Q9NRM2 450 aaPredicted RBP18.45■□□□□ 0.54
ATG4D-206ENST00000586863 SNED1Q8TER0 1413 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
ATG4D-206ENST00000586863 SCN4AP35499 1836 aa18.44■□□□□ 0.54
ATG4D-206ENST00000586863 IBTKQ9P2D0 1353 aaPredicted RBP18.44■□□□□ 0.54
ATG4D-206ENST00000586863 CRY2Q49AN0 593 aa18.44■□□□□ 0.54
ATG4D-206ENST00000586863 RIC1Q4ADV7 1423 aa18.43■□□□□ 0.54
ATG4D-206ENST00000586863 POTEIP0CG38 1075 aa18.43■□□□□ 0.54
ATG4D-206ENST00000586863 POTEJP0CG39 1038 aa18.43■□□□□ 0.54
ATG4D-206ENST00000586863 TMPOP42166 694 aaKnown RBP18.43■□□□□ 0.54
ATG4D-206ENST00000586863 LRP10Q7Z4F1 713 aa18.43■□□□□ 0.54
ATG4D-206ENST00000586863 ALDH1B1P30837 517 aa18.42■□□□□ 0.54
ATG4D-206ENST00000586863 DDX10Q13206 875 aaKnown RBP18.42■□□□□ 0.54
ATG4D-206ENST00000586863 PROSER3Q2NL68 480 aa18.42■□□□□ 0.54
ATG4D-206ENST00000586863 SUSD4Q5VX71 490 aa18.42■□□□□ 0.54
ATG4D-206ENST00000586863 ZNF34Q8IZ26 560 aa18.42■□□□□ 0.54
ATG4D-206ENST00000586863 ZNF541Q9H0D2 1346 aa18.42■□□□□ 0.54
ATG4D-206ENST00000586863 ANKRD36CQ5JPF3 1778 aa18.41■□□□□ 0.54
ATG4D-206ENST00000586863 NTSR2O95665 410 aa18.41■□□□□ 0.54
ATG4D-206ENST00000586863 ANXA1P04083 346 aa18.41■□□□□ 0.54
ATG4D-206ENST00000586863 EIF2S2P20042 333 aaKnown RBP18.41■□□□□ 0.54
ATG4D-206ENST00000586863 PDIA6Q15084 440 aa18.41■□□□□ 0.54
ATG4D-206ENST00000586863 RTKN2Q8IZC4 609 aa18.41■□□□□ 0.54
ATG4D-206ENST00000586863 MYBBP1AQ9BQG0 1328 aaKnown RBP18.41■□□□□ 0.54
ATG4D-206ENST00000586863 GIGYF2Q6Y7W6 1299 aaKnown RBP18.4■□□□□ 0.54
ATG4D-206ENST00000586863 SLC51AQ86UW1 340 aa18.4■□□□□ 0.54
ATG4D-206ENST00000586863 CCDC146Q8IYE0 955 aa18.4■□□□□ 0.54
ATG4D-206ENST00000586863 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
ATG4D-206ENST00000586863 COL4A5P29400 1685 aa18.4■□□□□ 0.54
ATG4D-206ENST00000586863 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 293.9 ms