RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
ACTN4-209ENST00000586538 PRAMEF22A3QJZ6 481 aa14.75□□□□□ -0.05
ACTN4-209ENST00000586538 ERVV-1B6SEH8 477 aa14.75□□□□□ -0.05
ACTN4-209ENST00000586538 TOMM70O94826 608 aa14.75□□□□□ -0.05
ACTN4-209ENST00000586538 ZEB1P37275 1124 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-209ENST00000586538 STYK1Q6J9G0 422 aa14.75□□□□□ -0.05
ACTN4-209ENST00000586538 MASTLQ96GX5 879 aa14.75□□□□□ -0.05
ACTN4-209ENST00000586538 NIP7Q9Y221 180 aaKnown RBP eCLIP14.75□□□□□ -0.05
ACTN4-209ENST00000586538 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
ACTN4-209ENST00000586538 ANKRD31Q8N7Z5 1873 aa14.74□□□□□ -0.05
ACTN4-209ENST00000586538 KIF3CO14782 793 aa14.74□□□□□ -0.05
ACTN4-209ENST00000586538 GTF2E1P29083 439 aaPredicted RBP14.74□□□□□ -0.05
ACTN4-209ENST00000586538 PIP4K2AP48426 406 aaPredicted RBP14.74□□□□□ -0.05
ACTN4-209ENST00000586538 MIS18AQ9NYP9 233 aa14.74□□□□□ -0.05
ACTN4-209ENST00000586538 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 HSPA6P17066 643 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 TMPOP42166 694 aaKnown RBP14.73□□□□□ -0.05
ACTN4-209ENST00000586538 NBPF10Q6P3W6 841 aaKnown RBP14.73□□□□□ -0.05
ACTN4-209ENST00000586538 NBPF15Q8N660 670 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 RUNDC1Q96C34 613 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 SBF1O95248 1867 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 ARFGEF2Q9Y6D5 1785 aa14.73□□□□□ -0.05
ACTN4-209ENST00000586538 SRGNP10124 158 aa14.72□□□□□ -0.05
ACTN4-209ENST00000586538 DPY19L2Q6NUT2 758 aa14.72□□□□□ -0.05
ACTN4-209ENST00000586538 COL11A2P13942 1736 aaPredicted RBP14.72□□□□□ -0.05
ACTN4-209ENST00000586538 IBTKQ9P2D0 1353 aaPredicted RBP14.72□□□□□ -0.05
ACTN4-209ENST00000586538 MAP3K15Q6ZN16 1313 aa14.71□□□□□ -0.05
ACTN4-209ENST00000586538 LTBP3Q9NS15 1303 aa14.71□□□□□ -0.05
ACTN4-209ENST00000586538 NPR1P16066 1061 aa14.71□□□□□ -0.05
ACTN4-209ENST00000586538 ALDH1B1P30837 517 aa14.71□□□□□ -0.05
ACTN4-209ENST00000586538 RBM46Q8TBY0 533 aaKnown RBP14.71□□□□□ -0.05
ACTN4-209ENST00000586538 THUMPD2Q9BTF0 503 aaKnown RBP14.71□□□□□ -0.05
ACTN4-209ENST00000586538 TAOK3Q9H2K8 898 aa14.71□□□□□ -0.05
ACTN4-209ENST00000586538 RRP7AQ9Y3A4 280 aaKnown RBP14.71□□□□□ -0.05
ACTN4-209ENST00000586538 RASSF7Q02833 373 aa14.7□□□□□ -0.06
ACTN4-209ENST00000586538 PRPF40BQ6NWY9 871 aaKnown RBP14.7□□□□□ -0.06
ACTN4-209ENST00000586538 PRKRIP1Q9H875 184 aaPredicted RBP14.7□□□□□ -0.06
ACTN4-209ENST00000586538 TIAM2Q8IVF5 1701 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 C21orf2O43822 256 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 MYL6BP14649 208 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 APLP1P51693 650 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 CALD1Q05682 793 aaKnown RBP14.69□□□□□ -0.06
ACTN4-209ENST00000586538 FSTL1Q12841 308 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 CCDC93Q567U6 631 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 NGEFQ8N5V2 710 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 NMRK2Q9NPI5 230 aa14.69□□□□□ -0.06
ACTN4-209ENST00000586538 RIC1Q4ADV7 1423 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 FER1L6Q2WGJ9 1857 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 KLRG2A4D1S0 409 aaPredicted RBP14.68□□□□□ -0.06
ACTN4-209ENST00000586538 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 HOXB7P09629 217 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 NEUROD2Q15784 382 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 GRIPAP1Q4V328 841 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 PARP10Q53GL7 1025 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 HSP90AB3PQ58FF7 597 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 PPP1R42Q7Z4L9 355 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 CCDC24Q8N4L8 307 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 NUP98P52948 1817 aa14.68□□□□□ -0.06
ACTN4-209ENST00000586538 RNF123Q5XPI4 1314 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 NFKBIEO00221 500 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 EIF2S2P20042 333 aaKnown RBP14.67□□□□□ -0.06
ACTN4-209ENST00000586538 HLFQ16534 295 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 ERFEQ4G0M1 354 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 GIGYF2Q6Y7W6 1299 aaKnown RBP14.67□□□□□ -0.06
ACTN4-209ENST00000586538 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 RTKN2Q8IZC4 609 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 CHMP4AQ9BY43 222 aa14.67□□□□□ -0.06
ACTN4-209ENST00000586538 CACNA1SQ13698 1873 aa14.66□□□□□ -0.06
ACTN4-209ENST00000586538 FAM177BA6PVY3 158 aa14.66□□□□□ -0.06
ACTN4-209ENST00000586538 VEGFAP15692 232 aaPredicted RBP14.66□□□□□ -0.06
ACTN4-209ENST00000586538 CC2D2BQ6DHV5 1058 aa14.66□□□□□ -0.06
ACTN4-209ENST00000586538 SMC1BQ8NDV3 1235 aa14.66□□□□□ -0.06
ACTN4-209ENST00000586538 TMX4Q9H1E5 349 aaPredicted RBP14.66□□□□□ -0.06
ACTN4-209ENST00000586538 DICER1Q9UPY3 1922 aaKnown RBP14.66□□□□□ -0.06
ACTN4-209ENST00000586538 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
ACTN4-209ENST00000586538 CHL1O00533 1208 aa14.65□□□□□ -0.06
ACTN4-209ENST00000586538 RPGRQ92834 1020 aaKnown RBP14.65□□□□□ -0.06
ACTN4-209ENST00000586538 ZBTB3Q9H5J0 574 aa14.65□□□□□ -0.06
ACTN4-209ENST00000586538 RRAGCQ9HB90 399 aa14.65□□□□□ -0.06
ACTN4-209ENST00000586538 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
ACTN4-209ENST00000586538 ADAMTS8Q9UP79 889 aa14.65□□□□□ -0.06
ACTN4-209ENST00000586538 TTLL7Q6ZT98 887 aa14.64□□□□□ -0.07
ACTN4-209ENST00000586538 CFAP44Q96MT7 982 aa14.64□□□□□ -0.07
ACTN4-209ENST00000586538 LAS1LQ9Y4W2 734 aaKnown RBP14.64□□□□□ -0.07
ACTN4-209ENST00000586538 SLX4Q8IY92 1834 aa14.64□□□□□ -0.07
ACTN4-209ENST00000586538 FKBP4Q02790 459 aaKnown RBP eCLIP14.63□□□□□ -0.071e-6■■□□□ 12.1
ACTN4-209ENST00000586538 CRY2Q49AN0 593 aa14.63□□□□□ -0.07
ACTN4-209ENST00000586538 ZNF34Q8IZ26 560 aa14.63□□□□□ -0.07
ACTN4-209ENST00000586538 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
ACTN4-209ENST00000586538 DDX21Q9NR30 783 aaKnown RBP eCLIP14.63□□□□□ -0.07
ACTN4-209ENST00000586538 WDR90Q96KV7 1748 aa14.63□□□□□ -0.07
ACTN4-209ENST00000586538 IQCA1LA6NCM1 817 aa14.62□□□□□ -0.07
ACTN4-209ENST00000586538 GPTP24298 496 aa14.62□□□□□ -0.07
ACTN4-209ENST00000586538 HDGFL1Q5TGJ6 251 aa14.62□□□□□ -0.07
ACTN4-209ENST00000586538 NLRP3Q96P20 1036 aa14.62□□□□□ -0.07
ACTN4-209ENST00000586538 UTP14AQ9BVJ6 771 aaKnown RBP14.62□□□□□ -0.07
ACTN4-209ENST00000586538 DBF4Q9UBU7 674 aaPredicted RBP14.62□□□□□ -0.07
ACTN4-209ENST00000586538 TRIM35Q9UPQ4 493 aa14.62□□□□□ -0.07
ACTN4-209ENST00000586538 ANKRD36CQ5JPF3 1778 aa14.61□□□□□ -0.07
ACTN4-209ENST00000586538 GNAI1P63096 354 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms