RNA–Protein interactions for RNA: ENST00000586084.1

PLEKHM1-214, Transcript of pleckstrin homology and RUN domain containing M1, human

TSL 4

Gene PLEKHM1, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLEKHM1-214	ENST00000586084	SLX4	Q8IY92	1834 aa		29.3	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	RTF1	Q92541	710 aa	Known RBP	29.3	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	LTBP3	Q9NS15	1303 aa		29.29	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	STYK1	Q6J9G0	422 aa		29.29	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	SOGA3	Q5TF21	947 aa		29.28	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	TAOK3	Q9H2K8	898 aa		29.28	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	USP16	Q9Y5T5	823 aa		29.28	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	SNRPA1	P09661	255 aa	Known RBP	29.27	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.27	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.27	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	CLEC4G	Q6UXB4	293 aa		29.27	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	ZNF652	Q9Y2D9	606 aa		29.27	■■■□□ 2.28
PLEKHM1-214	ENST00000586084	SRGN	P10124	158 aa		29.26	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	MASTL	Q96GX5	879 aa		29.26	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	PRPF40B	Q6NWY9	871 aa	Known RBP	29.25	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	NBPF5P	Q86XG9	351 aa	Predicted RBP	29.24	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	POTEC	B2RU33	542 aa		29.23	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	PIP4K2A	P48426	406 aa	Predicted RBP	29.23	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	MCM10	Q7L590	875 aa		29.23	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	HTATSF1	O43719	755 aa	Known RBP	29.22	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	PPP2R1A	P30153	589 aa		29.22	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	PRAMEF22	A3QJZ6	481 aa		29.21	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	RGL2	O15211	777 aa		29.21	■■■□□ 2.27
PLEKHM1-214	ENST00000586084	LAMB4	A4D0S4	1761 aa		29.19	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	TPTE2	Q6XPS3	522 aa		29.18	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	NPR1	P16066	1061 aa		29.17	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	COL13A1	Q5TAT6	717 aa	Predicted RBP	29.17	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	SCN4A	P35499	1836 aa		29.17	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	CCDC93	Q567U6	631 aa		29.16	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	NIP7	Q9Y221	180 aa	Known RBP eCLIP	29.16	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	DLG5	Q8TDM6	1919 aa		29.16	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	DDN	O94850	711 aa	Predicted RBP	29.15	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	DCTN1	Q14203	1278 aa		29.15	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	TAF7	Q15545	349 aa	Predicted RBP	29.15	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	CHADL	Q6NUI6	762 aa		29.15	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	NBPF26	B4DH59	902 aa		29.14	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	NBPF10	Q6P3W6	841 aa	Known RBP	29.14	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	NBPF15	Q8N660	670 aa		29.14	■■■□□ 2.26
PLEKHM1-214	ENST00000586084	KLRG2	A4D1S0	409 aa	Predicted RBP	29.13	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	IQCA1L	A6NCM1	817 aa		29.13	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	NEFM	P07197	916 aa		29.13	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	C7orf43	Q8WVR3	580 aa		29.13	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	KDM3B	Q7LBC6	1761 aa		29.11	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	NUP98	P52948	1817 aa		29.1	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	HSPA1A	P0DMV8	641 aa	Known RBP	29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	HSPA1B	P0DMV9	641 aa	Known RBP	29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	GTF2E1	P29083	439 aa	Predicted RBP	29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	ALDH1B1	P30837	517 aa		29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	FKBP4	Q02790	459 aa	Known RBP eCLIP	29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	RTKN2	Q8IZC4	609 aa		29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	PNISR	Q8TF01	805 aa	Known RBP	29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	CREBZF	Q9NS37	354 aa		29.09	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	FAM177B	A6PVY3	158 aa		29.08	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	TNS4	Q8IZW8	715 aa		29.08	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	L3MBTL3	Q96JM7	780 aa	Predicted RBP	29.08	■■■□□ 2.25
PLEKHM1-214	ENST00000586084	HLF	Q16534	295 aa		29.06	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	LDHD	Q86WU2	507 aa		29.06	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	MIS18A	Q9NYP9	233 aa		29.06	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	POTEI	P0CG38	1075 aa		29.05	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	POTEJ	P0CG39	1038 aa		29.05	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	NYX	Q9GZU5	481 aa		29.05	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	ZNF277	Q9NRM2	450 aa	Predicted RBP	29.05	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	TAF1D	Q9H5J8	278 aa	Predicted RBP	29.04	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	PCNT	O95613	3336 aa		29.04	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	ERVV-1	B6SEH8	477 aa		29.03	■■■□□ 2.24
PLEKHM1-214	ENST00000586084	KIF6	Q6ZMV9	814 aa		29.01	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	NGEF	Q8N5V2	710 aa		29.01	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	ZNF541	Q9H0D2	1346 aa		29	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	IARS	P41252	1262 aa	Known RBP	29	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	OLFM4	Q6UX06	510 aa		29	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	MKRN1	Q9UHC7	482 aa	Known RBP	29	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	HACL1	Q9UJ83	578 aa		29	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	MAP3K15	Q6ZN16	1313 aa		28.99	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	PASK	Q96RG2	1323 aa		28.99	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	EIF4A1	P60842	406 aa	Known RBP	28.98	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	CRY2	Q49AN0	593 aa		28.98	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	SYNE4	Q8N205	404 aa		28.98	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	PNN	Q9H307	717 aa	Known RBP	28.98	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	RRP7A	Q9Y3A4	280 aa	Known RBP	28.98	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	CAPN15	O75808	1086 aa		28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	EAPP	Q56P03	285 aa	Predicted RBP	28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	CC2D2B	Q6DHV5	1058 aa		28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	NUTM1	Q86Y26	1132 aa		28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	PSMD1	Q99460	953 aa		28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	ABCC12	Q96J65	1359 aa		28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	IBTK	Q9P2D0	1353 aa	Predicted RBP	28.97	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	RIC1	Q4ADV7	1423 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	ADAMTSL1	Q8N6G6	1762 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	FZD9	O00144	591 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	NFE2L2	Q16236	605 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	PNMA8A	Q86V59	439 aa	Predicted RBP	28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	JDP2	Q8WYK2	163 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	RPGR	Q92834	1020 aa	Known RBP	28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	PLEKHF1	Q96S99	279 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	CNTNAP1	P78357	1384 aa		28.96	■■■□□ 2.23
PLEKHM1-214	ENST00000586084	EPHX2	P34913	555 aa		28.95	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	CLEC11A	Q9Y240	323 aa		28.95	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	MAPK8IP3	Q9UPT6	1336 aa		28.94	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	MYL6B	P14649	208 aa		28.94	■■■□□ 2.22
PLEKHM1-214	ENST00000586084	GRIPAP1	Q4V328	841 aa		28.94	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms