RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 SOGA3Q5TF21 947 aa22.48■■□□□ 1.19
MBD3-204ENST00000585967 NBPF5PQ86XG9 351 aaPredicted RBP22.48■■□□□ 1.19
MBD3-204ENST00000585967 CNKSR1Q969H4 720 aa22.48■■□□□ 1.19
MBD3-204ENST00000585967 NMRK2Q9NPI5 230 aa22.47■■□□□ 1.19
MBD3-204ENST00000585967 WDR90Q96KV7 1748 aa22.47■■□□□ 1.19
MBD3-204ENST00000585967 SLX4Q8IY92 1834 aa22.46■■□□□ 1.19
MBD3-204ENST00000585967 APLP1P51693 650 aa22.46■■□□□ 1.19
MBD3-204ENST00000585967 RASSF7Q02833 373 aa22.46■■□□□ 1.19
MBD3-204ENST00000585967 RBM46Q8TBY0 533 aaKnown RBP22.46■■□□□ 1.19
MBD3-204ENST00000585967 LMOD3Q0VAK6 560 aa22.45■■□□□ 1.18
MBD3-204ENST00000585967 STYK1Q6J9G0 422 aa22.45■■□□□ 1.18
MBD3-204ENST00000585967 PLEKHF1Q96S99 279 aa22.45■■□□□ 1.18
MBD3-204ENST00000585967 PRAMEF22A3QJZ6 481 aa22.44■■□□□ 1.18
MBD3-204ENST00000585967 PIP4K2AP48426 406 aaPredicted RBP22.44■■□□□ 1.18
MBD3-204ENST00000585967 TPTE2Q6XPS3 522 aa22.44■■□□□ 1.18
MBD3-204ENST00000585967 MASTLQ96GX5 879 aa22.44■■□□□ 1.18
MBD3-204ENST00000585967 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
MBD3-204ENST00000585967 NIP7Q9Y221 180 aaKnown RBP eCLIP22.43■■□□□ 1.18
MBD3-204ENST00000585967 FSTL1Q12841 308 aa22.42■■□□□ 1.18
MBD3-204ENST00000585967 MYBBP1AQ9BQG0 1328 aaKnown RBP22.41■■□□□ 1.18
MBD3-204ENST00000585967 SRGNP10124 158 aa22.41■■□□□ 1.18
MBD3-204ENST00000585967 GTF2E1P29083 439 aaPredicted RBP22.41■■□□□ 1.18
MBD3-204ENST00000585967 NYXQ9GZU5 481 aa22.41■■□□□ 1.18
MBD3-204ENST00000585967 TAOK3Q9H2K8 898 aa22.41■■□□□ 1.18
MBD3-204ENST00000585967 MIS18AQ9NYP9 233 aa22.41■■□□□ 1.18
MBD3-204ENST00000585967 ERBB4Q15303 1308 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 LTBP3Q9NS15 1303 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 NBPF26B4DH59 902 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 C21orf2O43822 256 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 DPY19L2Q6NUT2 758 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 NBPF10Q6P3W6 841 aaKnown RBP22.4■■□□□ 1.18
MBD3-204ENST00000585967 CCDC24Q8N4L8 307 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 NBPF15Q8N660 670 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 ANKRD36CQ5JPF3 1778 aa22.4■■□□□ 1.18
MBD3-204ENST00000585967 GLTPD2A6NH11 291 aa22.39■■□□□ 1.17
MBD3-204ENST00000585967 NFKBIEO00221 500 aa22.39■■□□□ 1.17
MBD3-204ENST00000585967 NPR1P16066 1061 aa22.39■■□□□ 1.17
MBD3-204ENST00000585967 PRPF40BQ6NWY9 871 aaKnown RBP22.39■■□□□ 1.17
MBD3-204ENST00000585967 ERVV-1B6SEH8 477 aa22.38■■□□□ 1.17
MBD3-204ENST00000585967 EIF4A1P60842 406 aaKnown RBP22.38■■□□□ 1.17
MBD3-204ENST00000585967 RRAGCQ9HB90 399 aa22.38■■□□□ 1.17
MBD3-204ENST00000585967 BABAM1Q9NWV8 329 aa22.38■■□□□ 1.17
MBD3-204ENST00000585967 ZNF219Q9P2Y4 722 aaPredicted RBP22.38■■□□□ 1.17
MBD3-204ENST00000585967 TSPYL4Q9UJ04 414 aa22.38■■□□□ 1.17
MBD3-204ENST00000585967 VEGFAP15692 232 aaPredicted RBP22.37■■□□□ 1.17
MBD3-204ENST00000585967 RIPK4P57078 832 aa22.37■■□□□ 1.17
MBD3-204ENST00000585967 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
MBD3-204ENST00000585967 SMC1BQ8NDV3 1235 aa22.37■■□□□ 1.17
MBD3-204ENST00000585967 MAP3K15Q6ZN16 1313 aa22.36■■□□□ 1.17
MBD3-204ENST00000585967 ERFEQ4G0M1 354 aa22.36■■□□□ 1.17
MBD3-204ENST00000585967 IBTKQ9P2D0 1353 aaPredicted RBP22.36■■□□□ 1.17
MBD3-204ENST00000585967 SCN4AP35499 1836 aa22.36■■□□□ 1.17
MBD3-204ENST00000585967 ALDH1B1P30837 517 aa22.35■■□□□ 1.17
MBD3-204ENST00000585967 DDX10Q13206 875 aaKnown RBP22.35■■□□□ 1.17
MBD3-204ENST00000585967 CCDC93Q567U6 631 aa22.35■■□□□ 1.17
MBD3-204ENST00000585967 THUMPD2Q9BTF0 503 aaKnown RBP22.35■■□□□ 1.17
MBD3-204ENST00000585967 RRP7AQ9Y3A4 280 aaKnown RBP22.35■■□□□ 1.17
MBD3-204ENST00000585967 NGEFQ8N5V2 710 aa22.34■■□□□ 1.17
MBD3-204ENST00000585967 RIC1Q4ADV7 1423 aa22.33■■□□□ 1.17
MBD3-204ENST00000585967 FAM177BA6PVY3 158 aa22.33■■□□□ 1.17
MBD3-204ENST00000585967 MYL6BP14649 208 aa22.33■■□□□ 1.17
MBD3-204ENST00000585967 KLRG2A4D1S0 409 aaPredicted RBP22.32■■□□□ 1.16
MBD3-204ENST00000585967 HLFQ16534 295 aa22.32■■□□□ 1.16
MBD3-204ENST00000585967 TMPOP42166 694 aaKnown RBP22.31■■□□□ 1.16
MBD3-204ENST00000585967 RTKN2Q8IZC4 609 aa22.3■■□□□ 1.16
MBD3-204ENST00000585967 PRELPP51888 382 aa22.29■■□□□ 1.16
MBD3-204ENST00000585967 RPGRQ92834 1020 aaKnown RBP22.29■■□□□ 1.16
MBD3-204ENST00000585967 ZBTB3Q9H5J0 574 aa22.29■■□□□ 1.16
MBD3-204ENST00000585967 PARP10Q53GL7 1025 aa22.28■■□□□ 1.16
MBD3-204ENST00000585967 PPP1R42Q7Z4L9 355 aa22.28■■□□□ 1.16
MBD3-204ENST00000585967 RUNDC1Q96C34 613 aa22.28■■□□□ 1.16
MBD3-204ENST00000585967 FKBP4Q02790 459 aaKnown RBP eCLIP22.27■■□□□ 1.161e-6■■■□□ 15.1
MBD3-204ENST00000585967 CC2D2BQ6DHV5 1058 aa22.27■■□□□ 1.16
MBD3-204ENST00000585967 GIGYF2Q6Y7W6 1299 aaKnown RBP22.27■■□□□ 1.16
MBD3-204ENST00000585967 IQCA1LA6NCM1 817 aa22.26■■□□□ 1.15
MBD3-204ENST00000585967 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
MBD3-204ENST00000585967 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
MBD3-204ENST00000585967 HSP90AB3PQ58FF7 597 aa22.26■■□□□ 1.15
MBD3-204ENST00000585967 TTLL7Q6ZT98 887 aa22.26■■□□□ 1.15
MBD3-204ENST00000585967 TMX4Q9H1E5 349 aaPredicted RBP22.26■■□□□ 1.15
MBD3-204ENST00000585967 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
MBD3-204ENST00000585967 GPTP24298 496 aa22.25■■□□□ 1.15
MBD3-204ENST00000585967 NEUROD2Q15784 382 aa22.25■■□□□ 1.15
MBD3-204ENST00000585967 CRY2Q49AN0 593 aa22.25■■□□□ 1.15
MBD3-204ENST00000585967 LAMB2P55268 1798 aa22.25■■□□□ 1.15
MBD3-204ENST00000585967 ABCC12Q96J65 1359 aa22.25■■□□□ 1.15
MBD3-204ENST00000585967 NUTM1Q86Y26 1132 aa22.24■■□□□ 1.15
MBD3-204ENST00000585967 CCDC146Q8IYE0 955 aa22.24■■□□□ 1.15
MBD3-204ENST00000585967 C7orf43Q8WVR3 580 aa22.24■■□□□ 1.15
MBD3-204ENST00000585967 UBN2Q6ZU65 1347 aa22.23■■□□□ 1.15
MBD3-204ENST00000585967 ZNF34Q8IZ26 560 aa22.22■■□□□ 1.15
MBD3-204ENST00000585967 RBM17Q96I25 401 aaKnown RBP22.22■■□□□ 1.15
MBD3-204ENST00000585967 JDP2Q8WYK2 163 aa22.21■■□□□ 1.15
MBD3-204ENST00000585967 KLRG1Q96E93 195 aa22.21■■□□□ 1.15
MBD3-204ENST00000585967 PSMD1Q99460 953 aa22.21■■□□□ 1.15
MBD3-204ENST00000585967 HOXB7P09629 217 aa22.2■■□□□ 1.14
MBD3-204ENST00000585967 HOXA10P31260 410 aaPredicted RBP22.2■■□□□ 1.14
MBD3-204ENST00000585967 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
MBD3-204ENST00000585967 CALD1Q05682 793 aaKnown RBP22.2■■□□□ 1.14
MBD3-204ENST00000585967 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms