RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SRGNP10124 158 aa26.79■■□□□ 1.88
CLPTM1-204ENST00000585961 NBPF10Q6P3W6 841 aaKnown RBP26.79■■□□□ 1.88
CLPTM1-204ENST00000585961 NBPF15Q8N660 670 aa26.79■■□□□ 1.88
CLPTM1-204ENST00000585961 TAF7Q15545 349 aaPredicted RBP26.78■■□□□ 1.88
CLPTM1-204ENST00000585961 STYK1Q6J9G0 422 aa26.78■■□□□ 1.88
CLPTM1-204ENST00000585961 PRPF40BQ6NWY9 871 aaKnown RBP26.78■■□□□ 1.88
CLPTM1-204ENST00000585961 NGEFQ8N5V2 710 aa26.78■■□□□ 1.88
CLPTM1-204ENST00000585961 MASTLQ96GX5 879 aa26.78■■□□□ 1.88
CLPTM1-204ENST00000585961 CLEC4GQ6UXB4 293 aa26.76■■□□□ 1.87
CLPTM1-204ENST00000585961 DDNO94850 711 aaPredicted RBP26.75■■□□□ 1.87
CLPTM1-204ENST00000585961 TAOK3Q9H2K8 898 aa26.75■■□□□ 1.87
CLPTM1-204ENST00000585961 NIP7Q9Y221 180 aaKnown RBP eCLIP26.75■■□□□ 1.87
CLPTM1-204ENST00000585961 SIPA1L3O60292 1781 aaPredicted RBP26.74■■□□□ 1.87
CLPTM1-204ENST00000585961 HTATSF1O43719 755 aaKnown RBP26.74■■□□□ 1.87
CLPTM1-204ENST00000585961 HLFQ16534 295 aa26.74■■□□□ 1.87
CLPTM1-204ENST00000585961 ZNF652Q9Y2D9 606 aa26.74■■□□□ 1.87
CLPTM1-204ENST00000585961 ANKRD31Q8N7Z5 1873 aa26.73■■□□□ 1.87
CLPTM1-204ENST00000585961 TPTE2Q6XPS3 522 aa26.73■■□□□ 1.87
CLPTM1-204ENST00000585961 JMYQ8N9B5 988 aa26.73■■□□□ 1.87
CLPTM1-204ENST00000585961 OLFM4Q6UX06 510 aa26.72■■□□□ 1.87
CLPTM1-204ENST00000585961 CCDC88AQ3V6T2 1871 aa26.72■■□□□ 1.87
CLPTM1-204ENST00000585961 C7orf43Q8WVR3 580 aa26.7■■□□□ 1.86
CLPTM1-204ENST00000585961 THUMPD2Q9BTF0 503 aaKnown RBP26.7■■□□□ 1.86
CLPTM1-204ENST00000585961 RRP7AQ9Y3A4 280 aaKnown RBP26.7■■□□□ 1.86
CLPTM1-204ENST00000585961 DLEC1Q9Y238 1755 aa26.7■■□□□ 1.86
CLPTM1-204ENST00000585961 WDR90Q96KV7 1748 aa26.7■■□□□ 1.86
CLPTM1-204ENST00000585961 NEFMP07197 916 aa26.69■■□□□ 1.86
CLPTM1-204ENST00000585961 NPR1P16066 1061 aa26.69■■□□□ 1.86
CLPTM1-204ENST00000585961 GTF2E1P29083 439 aaPredicted RBP26.69■■□□□ 1.86
CLPTM1-204ENST00000585961 COL13A1Q5TAT6 717 aaPredicted RBP26.69■■□□□ 1.86
CLPTM1-204ENST00000585961 SLX4Q8IY92 1834 aa26.68■■□□□ 1.86
CLPTM1-204ENST00000585961 POTEIP0CG38 1075 aa26.68■■□□□ 1.86
CLPTM1-204ENST00000585961 POTEJP0CG39 1038 aa26.68■■□□□ 1.86
CLPTM1-204ENST00000585961 TNRC6CQ9HCJ0 1690 aaKnown RBP26.68■■□□□ 1.86
CLPTM1-204ENST00000585961 LTBP3Q9NS15 1303 aa26.67■■□□□ 1.86
CLPTM1-204ENST00000585961 SOGA3Q5TF21 947 aa26.67■■□□□ 1.86
CLPTM1-204ENST00000585961 ZNF277Q9NRM2 450 aaPredicted RBP26.67■■□□□ 1.86
CLPTM1-204ENST00000585961 SCN7AQ01118 1682 aa26.66■■□□□ 1.86
CLPTM1-204ENST00000585961 CCDC93Q567U6 631 aa26.65■■□□□ 1.86
CLPTM1-204ENST00000585961 COL11A2P13942 1736 aaPredicted RBP26.65■■□□□ 1.86
CLPTM1-204ENST00000585961 PCNTO95613 3336 aa26.64■■□□□ 1.86
CLPTM1-204ENST00000585961 KLRG2A4D1S0 409 aaPredicted RBP26.64■■□□□ 1.86
CLPTM1-204ENST00000585961 MYL6BP14649 208 aa26.64■■□□□ 1.86
CLPTM1-204ENST00000585961 NUTM1Q86Y26 1132 aa26.64■■□□□ 1.86
CLPTM1-204ENST00000585961 PLEKHF1Q96S99 279 aa26.64■■□□□ 1.86
CLPTM1-204ENST00000585961 CHADLQ6NUI6 762 aa26.63■■□□□ 1.85
CLPTM1-204ENST00000585961 TTLL7Q6ZT98 887 aa26.63■■□□□ 1.85
CLPTM1-204ENST00000585961 EIF4A1P60842 406 aaKnown RBP26.62■■□□□ 1.85
CLPTM1-204ENST00000585961 PNISRQ8TF01 805 aaKnown RBP26.62■■□□□ 1.85
CLPTM1-204ENST00000585961 GPTP24298 496 aa26.61■■□□□ 1.85
CLPTM1-204ENST00000585961 FKBP4Q02790 459 aaKnown RBP eCLIP26.61■■□□□ 1.85
CLPTM1-204ENST00000585961 NFE2L2Q16236 605 aa26.61■■□□□ 1.85
CLPTM1-204ENST00000585961 SYNE4Q8N205 404 aa26.61■■□□□ 1.85
CLPTM1-204ENST00000585961 FER1L6Q2WGJ9 1857 aa26.6■■□□□ 1.85
CLPTM1-204ENST00000585961 TIAM2Q8IVF5 1701 aa26.59■■□□□ 1.85
CLPTM1-204ENST00000585961 ALDH1B1P30837 517 aa26.59■■□□□ 1.85
CLPTM1-204ENST00000585961 ZBTB3Q9H5J0 574 aa26.59■■□□□ 1.85
CLPTM1-204ENST00000585961 RTKN2Q8IZC4 609 aa26.58■■□□□ 1.85
CLPTM1-204ENST00000585961 MKRN1Q9UHC7 482 aaKnown RBP26.58■■□□□ 1.85
CLPTM1-204ENST00000585961 ERVV-1B6SEH8 477 aa26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 HSPA1AP0DMV8 641 aaKnown RBP26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 HSPA1BP0DMV9 641 aaKnown RBP26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 EAPPQ56P03 285 aaPredicted RBP26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 KIF6Q6ZMV9 814 aa26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 TAF1DQ9H5J8 278 aaPredicted RBP26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 MAP3K15Q6ZN16 1313 aa26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 ZNF541Q9H0D2 1346 aa26.57■■□□□ 1.84
CLPTM1-204ENST00000585961 TCERG1O14776 1098 aaKnown RBP26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 RGL2O15211 777 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 CAPN15O75808 1086 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 SUSD4Q5VX71 490 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 NYXQ9GZU5 481 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 CLEC11AQ9Y240 323 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 BCORQ6W2J9 1755 aa26.56■■□□□ 1.84
CLPTM1-204ENST00000585961 CACNA1SQ13698 1873 aa26.55■■□□□ 1.84
CLPTM1-204ENST00000585961 IQCA1LA6NCM1 817 aa26.54■■□□□ 1.84
CLPTM1-204ENST00000585961 EIF2S2P20042 333 aaKnown RBP26.54■■□□□ 1.84
CLPTM1-204ENST00000585961 PNNQ9H307 717 aaKnown RBP26.54■■□□□ 1.84
CLPTM1-204ENST00000585961 MAPK8IP3Q9UPT6 1336 aa26.54■■□□□ 1.84
CLPTM1-204ENST00000585961 IARSP41252 1262 aaKnown RBP26.53■■□□□ 1.84
CLPTM1-204ENST00000585961 SLC51AQ86UW1 340 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 LDHDQ86WU2 507 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 TNS4Q8IZW8 715 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 RPGRQ92834 1020 aaKnown RBP26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 ABCC12Q96J65 1359 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 L3MBTL3Q96JM7 780 aaPredicted RBP26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 CREBZFQ9NS37 354 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 TSPYL4Q9UJ04 414 aa26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 DICER1Q9UPY3 1922 aaKnown RBP26.52■■□□□ 1.84
CLPTM1-204ENST00000585961 UBN2Q6ZU65 1347 aa26.51■■□□□ 1.83
CLPTM1-204ENST00000585961 RIPK4P57078 832 aa26.51■■□□□ 1.83
CLPTM1-204ENST00000585961 ANXA1P04083 346 aa26.5■■□□□ 1.83
CLPTM1-204ENST00000585961 CRY2Q49AN0 593 aa26.5■■□□□ 1.83
CLPTM1-204ENST00000585961 HACL1Q9UJ83 578 aa26.5■■□□□ 1.83
CLPTM1-204ENST00000585961 FZD9O00144 591 aa26.49■■□□□ 1.83
CLPTM1-204ENST00000585961 C3orf67Q6ZVT6 689 aa26.49■■□□□ 1.83
CLPTM1-204ENST00000585961 ZNF34Q8IZ26 560 aa26.49■■□□□ 1.83
CLPTM1-204ENST00000585961 NECTIN2Q92692 538 aa26.49■■□□□ 1.83
CLPTM1-204ENST00000585961 GJA3Q9Y6H8 435 aa26.49■■□□□ 1.83
CLPTM1-204ENST00000585961 EPHX2P34913 555 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms