RNA–Protein interactions for RNA: ENST00000585799.5

SMARCA4-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,842 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-208ENST00000585799 TCEANC2Q96MN5 208 aa15.02□□□□□ -0.01
SMARCA4-208ENST00000585799 CCDC57Q2TAC2 916 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 ZGPATQ8N5A5 531 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 SNRKQ9NRH2 765 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 SMC3Q9UQE7 1217 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 EXOC5O00471 708 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 CPA1P15085 419 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 CASTP20810 708 aaKnown RBP15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 KIF24Q5T7B8 1368 aa15.01□□□□□ -0.01
SMARCA4-208ENST00000585799 GOLGA6L4A6NEF3 574 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 SSH3Q8TE77 659 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 SLIT1O75093 1534 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 CAVIN1Q6NZI2 390 aaKnown RBP15□□□□□ -0.01
SMARCA4-208ENST00000585799 TTLL7Q6ZT98 887 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 C3P01024 1663 aa15□□□□□ -0.01
SMARCA4-208ENST00000585799 STARD3NLO95772 234 aa14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 APPP05067 770 aa14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 CNNM1Q9NRU3 951 aa14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 TOMM22Q9NS69 142 aa14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 DDX46Q7L014 1031 aaKnown RBP14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 CEP126Q9P2H0 1117 aa14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 CWC25Q9NXE8 425 aaPredicted RBP14.99□□□□□ -0.01
SMARCA4-208ENST00000585799 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 RNF20Q5VTR2 975 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 TBC1D2BQ9UPU7 963 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 SSH2Q76I76 1423 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 GCKRQ14397 625 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 SPATA31A3Q5VYP0 1347 aa14.98□□□□□ -0.01
SMARCA4-208ENST00000585799 KDM4AO75164 1064 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 PTMAP06454 111 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 DNAJC10Q8IXB1 793 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 ZNF594Q96JF6 807 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 TFCP2Q12800 502 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 SNX21Q969T3 373 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 PALD1Q9ULE6 856 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 PPFIA3O75145 1194 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 TMX3Q96JJ7 454 aa14.97□□□□□ -0.01
SMARCA4-208ENST00000585799 GDPD2Q9HCC8 539 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 CYP46A1Q9Y6A2 500 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 NEURL1BA8MQ27 555 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 GOLIM4O00461 696 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 PCDH11XQ9BZA7 1347 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 PCDH11YQ9BZA8 1340 aa14.96□□□□□ -0.01
SMARCA4-208ENST00000585799 TIMM10P62072 90 aa14.96□□□□□ -0.02
SMARCA4-208ENST00000585799 FAM89AQ96GI7 184 aa14.96□□□□□ -0.02
SMARCA4-208ENST00000585799 CIZ1Q9ULV3 898 aaPredicted RBP14.96□□□□□ -0.02
SMARCA4-208ENST00000585799 IBTKQ9P2D0 1353 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 STK11IPQ8N1F8 1099 aa14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 TRMT112Q9UI30 125 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 TTC39AQ5SRH9 613 aa14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 CHAMP1Q96JM3 812 aa14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 PDRG1Q9NUG6 133 aa14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-208ENST00000585799 SKOR2Q2VWA4 1001 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 ASAP1Q9ULH1 1129 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 FIBPO43427 364 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 RNF214Q8ND24 703 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 EVI5LQ96CN4 794 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 MCM2P49736 904 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 FAM227BQ96M60 508 aa14.94□□□□□ -0.02
SMARCA4-208ENST00000585799 METTL24Q5JXM2 366 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 FERMT3Q86UX7 667 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 TLR7Q9NYK1 1049 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 PTMSP20962 102 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 BLOC1S2Q6QNY1 142 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 DBNDD2Q9BQY9 259 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 IFIT1P09914 478 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 FAM184AQ8NB25 1140 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 NGLY1Q96IV0 654 aa14.93□□□□□ -0.02
SMARCA4-208ENST00000585799 NRKQ7Z2Y5 1582 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 NECAB1Q8N987 351 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 ATP10DQ9P241 1426 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 H3BQV1 296 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 HIP1O00291 1037 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 BAG4O95429 457 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 IGKV5-2P06315 115 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 PRIM1P49642 420 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 EPHA10Q5JZY3 1008 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 IFFO2Q5TF58 517 aa14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 IFIT5Q13325 482 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 MEX3CQ5U5Q3 659 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 CWC22Q9HCG8 908 aaKnown RBP14.92□□□□□ -0.02
SMARCA4-208ENST00000585799 PKP1Q13835 747 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 PLBD2Q8NHP8 589 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 LRRC2Q9BYS8 371 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 WDR17Q8IZU2 1322 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 HSP90AB3PQ58FF7 597 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 RBM8AQ9Y5S9 174 aaKnown RBP14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 LDHAL6AQ6ZMR3 332 aa14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 HELBQ8NG08 1087 aaPredicted RBP14.91□□□□□ -0.02
SMARCA4-208ENST00000585799 ADCY9O60503 1353 aa14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 PSMA5P28066 241 aa14.9□□□□□ -0.02
SMARCA4-208ENST00000585799 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms