RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 STYK1Q6J9G0 422 aa19.27■□□□□ 0.68
CSNK1D-224ENST00000584672 ZNF277Q9NRM2 450 aaPredicted RBP19.27■□□□□ 0.68
CSNK1D-224ENST00000584672 HACL1Q9UJ83 578 aa19.27■□□□□ 0.68
CSNK1D-224ENST00000584672 CCDC85CA6NKD9 419 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 SRGNP10124 158 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 EPHX2P34913 555 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 ST5P78524 1137 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 OLFM4Q6UX06 510 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 ZNF496Q96IT1 587 aaPredicted RBP19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 SETDB2Q96T68 719 aa19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 ABT1Q9ULW3 272 aaKnown RBP19.26■□□□□ 0.67
CSNK1D-224ENST00000584672 RNF123Q5XPI4 1314 aa19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 WDR33Q9C0J8 1336 aaKnown RBP19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 RASSF10A6NK89 507 aa19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 GRM1Q13255 1194 aa19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 SOGA3Q5TF21 947 aa19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 MASTLQ96GX5 879 aa19.25■□□□□ 0.67
CSNK1D-224ENST00000584672 BCORQ6W2J9 1755 aa19.24■□□□□ 0.67
CSNK1D-224ENST00000584672 CCDC93Q567U6 631 aa19.24■□□□□ 0.67
CSNK1D-224ENST00000584672 PAXIP1Q6ZW49 1069 aaPredicted RBP19.24■□□□□ 0.67
CSNK1D-224ENST00000584672 CNTROBQ8N137 903 aa19.24■□□□□ 0.67
CSNK1D-224ENST00000584672 HEG1Q9ULI3 1381 aa19.23■□□□□ 0.67
CSNK1D-224ENST00000584672 CAMTA2O94983 1202 aa19.23■□□□□ 0.67
CSNK1D-224ENST00000584672 A1BGP04217 495 aa19.23■□□□□ 0.67
CSNK1D-224ENST00000584672 MLLT1Q03111 559 aaPredicted RBP19.23■□□□□ 0.67
CSNK1D-224ENST00000584672 PIP4K2AP48426 406 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-224ENST00000584672 MAP2K1Q02750 393 aaPredicted RBP19.22■□□□□ 0.67
CSNK1D-224ENST00000584672 FMR1Q06787 632 aaKnown RBP eCLIP19.22■□□□□ 0.67
CSNK1D-224ENST00000584672 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
CSNK1D-224ENST00000584672 FKBP4Q02790 459 aaKnown RBP eCLIP19.21■□□□□ 0.675e-7■□□□□ 8.6
CSNK1D-224ENST00000584672 NPM2Q86SE8 214 aaKnown RBP19.21■□□□□ 0.67
CSNK1D-224ENST00000584672 C7orf43Q8WVR3 580 aa19.21■□□□□ 0.67
CSNK1D-224ENST00000584672 TSKSQ9UJT2 592 aa19.21■□□□□ 0.67
CSNK1D-224ENST00000584672 CFAP44Q96MT7 982 aa19.2■□□□□ 0.66
CSNK1D-224ENST00000584672 SIPA1L3O60292 1781 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-224ENST00000584672 TEFQ10587 303 aa19.19■□□□□ 0.66
CSNK1D-224ENST00000584672 ZNF790Q6PG37 636 aa19.19■□□□□ 0.66
CSNK1D-224ENST00000584672 NBPF5PQ86XG9 351 aaPredicted RBP19.19■□□□□ 0.66
CSNK1D-224ENST00000584672 DZIP3Q86Y13 1208 aaKnown RBP19.19■□□□□ 0.66
CSNK1D-224ENST00000584672 THSD7BQ9C0I4 1608 aa19.18■□□□□ 0.66
CSNK1D-224ENST00000584672 FAM177BA6PVY3 158 aa19.18■□□□□ 0.66
CSNK1D-224ENST00000584672 CYP4F22Q6NT55 531 aa19.18■□□□□ 0.66
CSNK1D-224ENST00000584672 PNMA8AQ86V59 439 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-224ENST00000584672 KNSTRNQ9Y448 316 aa19.18■□□□□ 0.66
CSNK1D-224ENST00000584672 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 NPR1P16066 1061 aa19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 CAPNS2Q96L46 248 aa19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 BEGAINQ9BUH8 593 aa19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 TEX13AQ9BXU3 409 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 DDX21Q9NR30 783 aaKnown RBP eCLIP19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 GJA3Q9Y6H8 435 aa19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 LTBP1Q14766 1721 aa19.17■□□□□ 0.66
CSNK1D-224ENST00000584672 IARSP41252 1262 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-224ENST00000584672 SYNE4Q8N205 404 aa19.16■□□□□ 0.66
CSNK1D-224ENST00000584672 KCNQ3O43525 872 aa19.15■□□□□ 0.66
CSNK1D-224ENST00000584672 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
CSNK1D-224ENST00000584672 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
CSNK1D-224ENST00000584672 FZD9O00144 591 aa19.14■□□□□ 0.65
CSNK1D-224ENST00000584672 AOC2O75106 756 aa19.14■□□□□ 0.65
CSNK1D-224ENST00000584672 GPR101Q96P66 508 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-224ENST00000584672 TRAF5O00463 557 aa19.13■□□□□ 0.65
CSNK1D-224ENST00000584672 RTKN2Q8IZC4 609 aa19.13■□□□□ 0.65
CSNK1D-224ENST00000584672 GPC2Q8N158 579 aa19.13■□□□□ 0.65
CSNK1D-224ENST00000584672 COL4A5P29400 1685 aa19.13■□□□□ 0.65
CSNK1D-224ENST00000584672 TRPM7Q96QT4 1865 aa19.13■□□□□ 0.65
CSNK1D-224ENST00000584672 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
CSNK1D-224ENST00000584672 DIAPH1O60610 1272 aaKnown RBP19.12■□□□□ 0.65
CSNK1D-224ENST00000584672 EIF4G2P78344 907 aaKnown RBP eCLIP19.12■□□□□ 0.65
CSNK1D-224ENST00000584672 GNAT3A8MTJ3 354 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 LMOD1P29536 600 aaPredicted RBP19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 ECE1P42892 770 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 RGS19P49795 217 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 JDP2Q8WYK2 163 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 NIP7Q9Y221 180 aaKnown RBP eCLIP19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 USP16Q9Y5T5 823 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 CASP8AP2Q9UKL3 1982 aa19.11■□□□□ 0.65
CSNK1D-224ENST00000584672 U2SURPO15042 1029 aaKnown RBP19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 EPS15P42566 896 aa19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 EIF6P56537 245 aaKnown RBP19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 AMER1Q5JTC6 1135 aaPredicted RBP19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 MCOLN1Q9GZU1 580 aa19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 ZNF652Q9Y2D9 606 aa19.1■□□□□ 0.65
CSNK1D-224ENST00000584672 KLRG2A4D1S0 409 aaPredicted RBP19.09■□□□□ 0.65
CSNK1D-224ENST00000584672 SLC51AQ86UW1 340 aa19.09■□□□□ 0.65
CSNK1D-224ENST00000584672 PCDH10Q9P2E7 1040 aa19.09■□□□□ 0.65
CSNK1D-224ENST00000584672 BTBD11A6QL63 1104 aa19.08■□□□□ 0.64
CSNK1D-224ENST00000584672 SCNN1DP51172 638 aa19.08■□□□□ 0.64
CSNK1D-224ENST00000584672 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.64
CSNK1D-224ENST00000584672 CST9Q5W186 159 aa19.08■□□□□ 0.64
CSNK1D-224ENST00000584672 TPTE2Q6XPS3 522 aa19.08■□□□□ 0.64
CSNK1D-224ENST00000584672 GTF2E1P29083 439 aaPredicted RBP19.07■□□□□ 0.64
CSNK1D-224ENST00000584672 ALDH1B1P30837 517 aa19.07■□□□□ 0.64
CSNK1D-224ENST00000584672 CLEC4GQ6UXB4 293 aa19.07■□□□□ 0.64
CSNK1D-224ENST00000584672 GAS2L2Q8NHY3 880 aa19.07■□□□□ 0.64
CSNK1D-224ENST00000584672 SNED1Q8TER0 1413 aa19.07■□□□□ 0.64
CSNK1D-224ENST00000584672 TCERG1O14776 1098 aaKnown RBP19.06■□□□□ 0.64
CSNK1D-224ENST00000584672 TLL2Q9Y6L7 1015 aa19.06■□□□□ 0.64
CSNK1D-224ENST00000584672 ABCC12Q96J65 1359 aa19.06■□□□□ 0.64
CSNK1D-224ENST00000584672 TNRC18O15417 2968 aaPredicted RBP19.05■□□□□ 0.64
CSNK1D-224ENST00000584672 CC2D1BQ5T0F9 858 aaKnown RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms