RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 HSP90AB3PQ58FF7 597 aa13.57□□□□□ -0.24
TOP3A-217ENST00000584582 BEND3Q5T5X7 828 aa13.57□□□□□ -0.24
TOP3A-217ENST00000584582 RAB11FIP4Q86YS3 637 aa13.57□□□□□ -0.24
TOP3A-217ENST00000584582 LINS1Q8NG48 757 aa13.57□□□□□ -0.24
TOP3A-217ENST00000584582 RAB3GAP1Q15042 981 aa13.56□□□□□ -0.24
TOP3A-217ENST00000584582 CHMP4CQ96CF2 233 aa13.56□□□□□ -0.24
TOP3A-217ENST00000584582 MED14O60244 1454 aa13.56□□□□□ -0.24
TOP3A-217ENST00000584582 TIMM10P62072 90 aa13.55□□□□□ -0.24
TOP3A-217ENST00000584582 RNF20Q5VTR2 975 aa13.55□□□□□ -0.24
TOP3A-217ENST00000584582 ZNF594Q96JF6 807 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-217ENST00000584582 GOLIM4O00461 696 aa13.55□□□□□ -0.24
TOP3A-217ENST00000584582 KIF2CQ99661 725 aa13.55□□□□□ -0.24
TOP3A-217ENST00000584582 BCL11BQ9C0K0 894 aaPredicted RBP13.55□□□□□ -0.24
TOP3A-217ENST00000584582 DDX21Q9NR30 783 aaKnown RBP eCLIP13.55□□□□□ -0.24
TOP3A-217ENST00000584582 TLR7Q9NYK1 1049 aaKnown RBP13.55□□□□□ -0.24
TOP3A-217ENST00000584582 SHPRHQ149N8 1683 aa13.55□□□□□ -0.24
TOP3A-217ENST00000584582 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 CWC22Q9HCG8 908 aaKnown RBP13.54□□□□□ -0.24
TOP3A-217ENST00000584582 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 PTMSP20962 102 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 BLOC1S2Q6QNY1 142 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 CCDC129Q6ZRS4 1044 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
TOP3A-217ENST00000584582 OVOS2A0A0J9YW53 1432 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 OVOS2Q6IE36 1432 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 TFCP2Q12800 502 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 CCDC57Q2TAC2 916 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
TOP3A-217ENST00000584582 NMIQ13287 307 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-217ENST00000584582 SYAP1Q96A49 352 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-217ENST00000584582 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 TFIP11Q9UBB9 837 aaKnown RBP13.53□□□□□ -0.24
TOP3A-217ENST00000584582 CRB1P82279 1406 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 GUCY1B3Q02153 619 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 LARP1BQ659C4 914 aaKnown RBP13.53□□□□□ -0.24
TOP3A-217ENST00000584582 CHST3Q7LGC8 479 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 HAND2P61296 217 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 FAM173BQ6P4H8 233 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 SSH3Q8TE77 659 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 EAF2Q96CJ1 260 aaPredicted RBP13.53□□□□□ -0.24
TOP3A-217ENST00000584582 SLC52A2Q9HAB3 445 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 CNNM1Q9NRU3 951 aa13.53□□□□□ -0.24
TOP3A-217ENST00000584582 AK2P54819 239 aa13.52□□□□□ -0.24
TOP3A-217ENST00000584582 ACSBG1Q96GR2 724 aa13.52□□□□□ -0.24
TOP3A-217ENST00000584582 MCM2P49736 904 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.25
TOP3A-217ENST00000584582 BICDL1Q6ZP65 573 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 TTLL7Q6ZT98 887 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 BICD2Q8TD16 824 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.52□□□□□ -0.25
TOP3A-217ENST00000584582 RBM8AQ9Y5S9 174 aaKnown RBP13.52□□□□□ -0.25
TOP3A-217ENST00000584582 NEURL4Q96JN8 1562 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
TOP3A-217ENST00000584582 GAS2L3Q86XJ1 694 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 RASEFQ8IZ41 740 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 CEP126Q9P2H0 1117 aa13.52□□□□□ -0.25
TOP3A-217ENST00000584582 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 FAM89AQ96GI7 184 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 IL25Q9H293 177 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 AGLP35573 1532 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 PTH1RQ03431 593 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 CAMK4Q16566 473 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 DBNDD2Q9BQY9 259 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 CDC42BPGQ6DT37 1551 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 ERBB3P21860 1342 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 PHKG2P15735 406 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
TOP3A-217ENST00000584582 SPATA31D1Q6ZQQ2 1576 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
TOP3A-217ENST00000584582 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
TOP3A-217ENST00000584582 SLFNL1Q499Z3 407 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 KIF6Q6ZMV9 814 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 PRKCSHP14314 528 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-217ENST00000584582 HELBQ8NG08 1087 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-217ENST00000584582 SEC62Q99442 399 aaKnown RBP13.5□□□□□ -0.25
TOP3A-217ENST00000584582 LIMCH1Q9UPQ0 1083 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 USP31Q70CQ4 1352 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 ALDH1L1O75891 902 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 GJB2P29033 226 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 EVI5LQ96CN4 794 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 CNPY2Q9Y2B0 182 aa13.5□□□□□ -0.25
TOP3A-217ENST00000584582 IBTKQ9P2D0 1353 aaPredicted RBP13.5□□□□□ -0.25
TOP3A-217ENST00000584582 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
TOP3A-217ENST00000584582 CHGBP05060 677 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 TTC39AQ5SRH9 613 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 WDR33Q9C0J8 1336 aaKnown RBP13.49□□□□□ -0.25
TOP3A-217ENST00000584582 GCKRQ14397 625 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 DCAF5Q96JK2 942 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 IFIT1P09914 478 aaKnown RBP13.49□□□□□ -0.25
TOP3A-217ENST00000584582 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 SNX14Q9Y5W7 946 aa13.49□□□□□ -0.25
TOP3A-217ENST00000584582 DLC1Q96QB1 1528 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 CYP27B1O15528 508 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 SGSM2O43147 1006 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 PSMA5P28066 241 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 PRIM1P49642 420 aaKnown RBP13.48□□□□□ -0.25
TOP3A-217ENST00000584582 RRP12Q5JTH9 1297 aaKnown RBP13.48□□□□□ -0.25
TOP3A-217ENST00000584582 BTG4Q9NY30 223 aa13.48□□□□□ -0.25
TOP3A-217ENST00000584582 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
TOP3A-217ENST00000584582 ADCK5Q3MIX3 580 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms