RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 PXDNLA1KZ92 1463 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.84□□□□□ -0.03
CDRT1-207ENST00000583965 ERVV-1B6SEH8 477 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 ZKSCAN2Q63HK3 967 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 KSR2Q6VAB6 950 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 TTLL7Q6ZT98 887 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 ANKRD13DQ6ZTN6 518 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
CDRT1-207ENST00000583965 ARHGEF1Q92888 912 aaKnown RBP14.84□□□□□ -0.03
CDRT1-207ENST00000583965 MAP3K15Q6ZN16 1313 aa14.84□□□□□ -0.03
CDRT1-207ENST00000583965 PHF14O94880 888 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 MS4A1P11836 297 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 RFC4P35249 363 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 RIC3Q7Z5B4 369 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 AMIGO3Q86WK7 504 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 NARFQ9UHQ1 456 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 RNF123Q5XPI4 1314 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 ADCY9O60503 1353 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 CASZ1Q86V15 1759 aa14.83□□□□□ -0.04
CDRT1-207ENST00000583965 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 ZPR1O75312 459 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 ARXQ96QS3 562 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 TBC1D2BQ9UPU7 963 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 ZNF652Q9Y2D9 606 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 PNPLA7Q6ZV29 1317 aa14.82□□□□□ -0.04
CDRT1-207ENST00000583965 USP42Q9H9J4 1324 aaKnown RBP14.82□□□□□ -0.04
CDRT1-207ENST00000583965 COL24A1Q17RW2 1714 aa14.81□□□□□ -0.04
CDRT1-207ENST00000583965 CAMTA2O94983 1202 aa14.81□□□□□ -0.04
CDRT1-207ENST00000583965 TRIM27P14373 513 aa14.81□□□□□ -0.04
CDRT1-207ENST00000583965 RRP1P56182 461 aaKnown RBP14.81□□□□□ -0.04
CDRT1-207ENST00000583965 CLEC4GQ6UXB4 293 aa14.81□□□□□ -0.04
CDRT1-207ENST00000583965 GIGYF2Q6Y7W6 1299 aaKnown RBP14.81□□□□□ -0.04
CDRT1-207ENST00000583965 DNAAF4Q8WXU2 420 aa14.81□□□□□ -0.04
CDRT1-207ENST00000583965 SOCS7O14512 581 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 HSP90AB3PQ58FF7 597 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 COL23A1Q86Y22 540 aaPredicted RBP14.8□□□□□ -0.04
CDRT1-207ENST00000583965 METTL22Q9BUU2 404 aaPredicted RBP14.8□□□□□ -0.04
CDRT1-207ENST00000583965 ZBTB3Q9H5J0 574 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
CDRT1-207ENST00000583965 ABCC4O15439 1325 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 ATP10DQ9P241 1426 aa14.8□□□□□ -0.04
CDRT1-207ENST00000583965 MYH3P11055 1940 aa14.79□□□□□ -0.04
CDRT1-207ENST00000583965 NEXNQ0ZGT2 675 aa14.79□□□□□ -0.04
CDRT1-207ENST00000583965 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
CDRT1-207ENST00000583965 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
CDRT1-207ENST00000583965 FTSJ3Q8IY81 847 aaKnown RBP14.79□□□□□ -0.04
CDRT1-207ENST00000583965 IBTKQ9P2D0 1353 aaPredicted RBP14.78□□□□□ -0.04
CDRT1-207ENST00000583965 F6X3S4 739 aa14.78□□□□□ -0.04
CDRT1-207ENST00000583965 PLIN1O60240 522 aa14.78□□□□□ -0.04
CDRT1-207ENST00000583965 TCIRG1Q13488 830 aa14.78□□□□□ -0.04
CDRT1-207ENST00000583965 HLFQ16534 295 aa14.78□□□□□ -0.04
CDRT1-207ENST00000583965 USPL1Q5W0Q7 1092 aa14.78□□□□□ -0.04
CDRT1-207ENST00000583965 DZIP1LQ8IYY4 767 aaKnown RBP14.78□□□□□ -0.04
CDRT1-207ENST00000583965 SRP68Q9UHB9 627 aaKnown RBP14.78□□□□□ -0.04
CDRT1-207ENST00000583965 MSH5O43196 834 aa14.77□□□□□ -0.05
CDRT1-207ENST00000583965 CCT4P50991 539 aaKnown RBP14.77□□□□□ -0.05
CDRT1-207ENST00000583965 SLC4A10Q6U841 1118 aa14.77□□□□□ -0.05
CDRT1-207ENST00000583965 LINS1Q8NG48 757 aa14.77□□□□□ -0.05
CDRT1-207ENST00000583965 SLC16A10Q8TF71 515 aa14.77□□□□□ -0.05
CDRT1-207ENST00000583965 GTF3C3Q9Y5Q9 886 aa14.77□□□□□ -0.05
CDRT1-207ENST00000583965 LAMB2P55268 1798 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 ALDH1L1O75891 902 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 GYS1P13807 737 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 TRIM28Q13263 835 aaKnown RBP14.76□□□□□ -0.05
CDRT1-207ENST00000583965 INTS3Q68E01 1043 aaKnown RBP14.76□□□□□ -0.05
CDRT1-207ENST00000583965 CLUAP1Q96AJ1 413 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 MYD88Q99836 296 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 ISCA1Q9BUE6 129 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 BCL2L12Q9HB09 334 aa14.76□□□□□ -0.05
CDRT1-207ENST00000583965 NRXN2Q9P2S2 1712 aa14.75□□□□□ -0.05
CDRT1-207ENST00000583965 BEND3Q5T5X7 828 aa14.75□□□□□ -0.05
CDRT1-207ENST00000583965 ZNF34Q8IZ26 560 aa14.75□□□□□ -0.05
CDRT1-207ENST00000583965 NLGN1Q8N2Q7 840 aa14.75□□□□□ -0.05
CDRT1-207ENST00000583965 SRCIN1Q9C0H9 1055 aa14.75□□□□□ -0.05
CDRT1-207ENST00000583965 RLBP1P12271 317 aa14.74□□□□□ -0.05
CDRT1-207ENST00000583965 R3HDM1Q15032 1099 aaKnown RBP14.74□□□□□ -0.05
CDRT1-207ENST00000583965 PARP10Q53GL7 1025 aa14.74□□□□□ -0.05
CDRT1-207ENST00000583965 CCDC191Q8NCU4 936 aa14.74□□□□□ -0.05
CDRT1-207ENST00000583965 TNNQ9UQP3 1299 aa14.74□□□□□ -0.05
CDRT1-207ENST00000583965 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 IGKV5-2P06315 115 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 FKBP8Q14318 412 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 TBC1D9BQ66K14 1250 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 TMEM57Q8N5G2 664 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 PANK1Q8TE04 598 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 SETDB2Q96T68 719 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 CWC25Q9NXE8 425 aaPredicted RBP14.73□□□□□ -0.05
CDRT1-207ENST00000583965 NIP7Q9Y221 180 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDRT1-207ENST00000583965 CARMIL3Q8ND23 1372 aa14.73□□□□□ -0.05
CDRT1-207ENST00000583965 ATP5J2-PTCD1G3V325 749 aa14.72□□□□□ -0.05
CDRT1-207ENST00000583965 MVPQ14764 893 aaKnown RBP14.72□□□□□ -0.05
CDRT1-207ENST00000583965 CWF19L2Q2TBE0 894 aaKnown RBP14.72□□□□□ -0.05
CDRT1-207ENST00000583965 PPP1R42Q7Z4L9 355 aa14.72□□□□□ -0.05
CDRT1-207ENST00000583965 NLRP10Q86W26 655 aa14.72□□□□□ -0.05
CDRT1-207ENST00000583965 CHMP4BQ9H444 224 aaKnown RBP14.72□□□□□ -0.05
CDRT1-207ENST00000583965 DDX60Q8IY21 1712 aaKnown RBP14.72□□□□□ -0.05
CDRT1-207ENST00000583965 UBN2Q6ZU65 1347 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms