RNA–Protein interactions for RNA: ENST00000583277.1

SENP3-208, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 1,578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-208ENST00000583277 ZBTB1Q9Y2K1 713 aa18.45■□□□□ 0.54
SENP3-208ENST00000583277 ALDH1L1O75891 902 aa18.44■□□□□ 0.54
SENP3-208ENST00000583277 TRIM37O94972 964 aa18.44■□□□□ 0.54
SENP3-208ENST00000583277 KIF6Q6ZMV9 814 aa18.44■□□□□ 0.54
SENP3-208ENST00000583277 LINS1Q8NG48 757 aa18.44■□□□□ 0.54
SENP3-208ENST00000583277 CCNL1Q9UK58 526 aaPredicted RBP18.44■□□□□ 0.54
SENP3-208ENST00000583277 CNTNAP4Q9C0A0 1308 aa18.44■□□□□ 0.54
SENP3-208ENST00000583277 RGPD3A6NKT7 1758 aaPredicted RBP18.43■□□□□ 0.54
SENP3-208ENST00000583277 RGPD4Q7Z3J3 1758 aa18.43■□□□□ 0.54
SENP3-208ENST00000583277 GNAI3P08754 354 aa18.43■□□□□ 0.54
SENP3-208ENST00000583277 HMGB2P26583 209 aaKnown RBP18.43■□□□□ 0.54
SENP3-208ENST00000583277 METTL22Q9BUU2 404 aaPredicted RBP18.43■□□□□ 0.54
SENP3-208ENST00000583277 TNS1Q9HBL0 1735 aaKnown RBP18.43■□□□□ 0.54
SENP3-208ENST00000583277 INTS5Q6P9B9 1019 aaKnown RBP18.42■□□□□ 0.54
SENP3-208ENST00000583277 TTLL7Q6ZT98 887 aa18.42■□□□□ 0.54
SENP3-208ENST00000583277 LINC00116Q8NCU8 138 aa18.42■□□□□ 0.54
SENP3-208ENST00000583277 MEIS3Q99687 375 aa18.42■□□□□ 0.54
SENP3-208ENST00000583277 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
SENP3-208ENST00000583277 ANKRD36CQ5JPF3 1778 aa18.42■□□□□ 0.54
SENP3-208ENST00000583277 C4BP0C0L5 1744 aa18.41■□□□□ 0.54
SENP3-208ENST00000583277 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
SENP3-208ENST00000583277 RC3H1Q5TC82 1133 aaKnown RBP18.41■□□□□ 0.54
SENP3-208ENST00000583277 PCDHB15Q9Y5E8 787 aa18.41■□□□□ 0.54
SENP3-208ENST00000583277 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
SENP3-208ENST00000583277 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
SENP3-208ENST00000583277 MAP3K15Q6ZN16 1313 aa18.4■□□□□ 0.54
SENP3-208ENST00000583277 MYD88Q99836 296 aa18.39■□□□□ 0.53
SENP3-208ENST00000583277 RWDD1Q9H446 243 aaPredicted RBP18.39■□□□□ 0.53
SENP3-208ENST00000583277 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
SENP3-208ENST00000583277 BCORQ6W2J9 1755 aa18.39■□□□□ 0.53
SENP3-208ENST00000583277 NUP98P52948 1817 aa18.39■□□□□ 0.53
SENP3-208ENST00000583277 GNAI2P04899 355 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 UBTFL1P0CB47 393 aaPredicted RBP18.38■□□□□ 0.53
SENP3-208ENST00000583277 USP44Q9H0E7 712 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 ZBTB3Q9H5J0 574 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 KDM2BQ8NHM5 1336 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 COL15A1P39059 1388 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 A0A087WZG4 1122 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 NEURL1BA8MQ27 555 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 ERVV-1B6SEH8 477 aa18.38■□□□□ 0.53
SENP3-208ENST00000583277 HDAC1Q13547 482 aaPredicted RBP18.38■□□□□ 0.53
SENP3-208ENST00000583277 DZIP3Q86Y13 1208 aaKnown RBP18.38■□□□□ 0.53
SENP3-208ENST00000583277 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
SENP3-208ENST00000583277 CWF19L2Q2TBE0 894 aaKnown RBP18.37■□□□□ 0.53
SENP3-208ENST00000583277 HSP90AB3PQ58FF7 597 aa18.37■□□□□ 0.53
SENP3-208ENST00000583277 C1orf115Q9H7X2 142 aa18.37■□□□□ 0.53
SENP3-208ENST00000583277 C9orf78Q9NZ63 289 aaPredicted RBP18.37■□□□□ 0.53
SENP3-208ENST00000583277 SCN7AQ01118 1682 aa18.36■□□□□ 0.53
SENP3-208ENST00000583277 GRM8O00222 908 aa18.36■□□□□ 0.53
SENP3-208ENST00000583277 PLSCR1O15162 318 aa18.36■□□□□ 0.53
SENP3-208ENST00000583277 RPAP2Q8IXW5 612 aaPredicted RBP18.36■□□□□ 0.53
SENP3-208ENST00000583277 UTYO14607 1347 aa18.35■□□□□ 0.53
SENP3-208ENST00000583277 KCNQ4P56696 695 aa18.35■□□□□ 0.53
SENP3-208ENST00000583277 GCKRQ14397 625 aa18.35■□□□□ 0.53
SENP3-208ENST00000583277 GIGYF2Q6Y7W6 1299 aaKnown RBP18.35■□□□□ 0.53
SENP3-208ENST00000583277 ARXQ96QS3 562 aa18.35■□□□□ 0.53
SENP3-208ENST00000583277 TCIRG1Q13488 830 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 UBR3Q6ZT12 1888 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 RGL2O15211 777 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 RPS6KA4O75676 772 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 APBA3O96018 575 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 TRIM28Q13263 835 aaKnown RBP18.34■□□□□ 0.53
SENP3-208ENST00000583277 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 ANKRD44Q8N8A2 993 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 AK7Q96M32 723 aa18.34■□□□□ 0.53
SENP3-208ENST00000583277 CWC25Q9NXE8 425 aaPredicted RBP18.34■□□□□ 0.53
SENP3-208ENST00000583277 GNPATO15228 680 aa18.33■□□□□ 0.52
SENP3-208ENST00000583277 HMMRO75330 724 aa18.33■□□□□ 0.52
SENP3-208ENST00000583277 IGHDP01880 384 aa18.33■□□□□ 0.52
SENP3-208ENST00000583277 ISCA1Q9BUE6 129 aa18.33■□□□□ 0.52
SENP3-208ENST00000583277 LRRC4BQ9NT99 713 aa18.33■□□□□ 0.52
SENP3-208ENST00000583277 RTCBQ9Y3I0 505 aaKnown RBP18.33■□□□□ 0.52
SENP3-208ENST00000583277 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.52
SENP3-208ENST00000583277 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
SENP3-208ENST00000583277 ATP5J2-PTCD1G3V325 749 aa18.32■□□□□ 0.52
SENP3-208ENST00000583277 NBPF7P0C2Y1 421 aaPredicted RBP18.32■□□□□ 0.52
SENP3-208ENST00000583277 TXNRD1Q16881 649 aa18.32■□□□□ 0.52
SENP3-208ENST00000583277 TBC1D2BQ9UPU7 963 aa18.32■□□□□ 0.52
SENP3-208ENST00000583277 ZNF652Q9Y2D9 606 aa18.32■□□□□ 0.52
SENP3-208ENST00000583277 CAMTA2O94983 1202 aa18.3■□□□□ 0.52
SENP3-208ENST00000583277 ADRA2BP18089 450 aa18.3■□□□□ 0.52
SENP3-208ENST00000583277 PELP1Q8IZL8 1130 aaKnown RBP18.3■□□□□ 0.52
SENP3-208ENST00000583277 HLFQ16534 295 aa18.3■□□□□ 0.52
SENP3-208ENST00000583277 SIRT2Q8IXJ6 389 aa18.3■□□□□ 0.52
SENP3-208ENST00000583277 CLEC4GQ6UXB4 293 aa18.29■□□□□ 0.52
SENP3-208ENST00000583277 GCC1Q96CN9 775 aa18.29■□□□□ 0.52
SENP3-208ENST00000583277 UBE3BQ7Z3V4 1068 aa18.28■□□□□ 0.52
SENP3-208ENST00000583277 H7C1W4 665 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 ATP8B2P98198 1209 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 MTX1Q13505 466 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 SMC5Q8IY18 1101 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 PROM2Q8N271 834 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 NARFQ9UHQ1 456 aa18.27■□□□□ 0.52
SENP3-208ENST00000583277 PARP10Q53GL7 1025 aa18.26■□□□□ 0.51
SENP3-208ENST00000583277 NLRP10Q86W26 655 aa18.26■□□□□ 0.51
SENP3-208ENST00000583277 ZNF34Q8IZ26 560 aa18.26■□□□□ 0.51
SENP3-208ENST00000583277 ZPR1O75312 459 aa18.25■□□□□ 0.51
SENP3-208ENST00000583277 PCCAP05165 728 aaPredicted RBP18.25■□□□□ 0.51
SENP3-208ENST00000583277 SSFA2P28290 1259 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms