RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 PER1O15534 1290 aaPredicted RBP8.72□□□□□ -1.01
NDEL1-216ENST00000583066 HOXB3P14651 431 aaPredicted RBP8.72□□□□□ -1.01
NDEL1-216ENST00000583066 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
NDEL1-216ENST00000583066 POLR3GLQ9BT43 218 aa8.72□□□□□ -1.01
NDEL1-216ENST00000583066 TTC21BQ7Z4L5 1316 aa8.72□□□□□ -1.01
NDEL1-216ENST00000583066 NPC1L1Q9UHC9 1359 aa8.72□□□□□ -1.01
NDEL1-216ENST00000583066 THSD7BQ9C0I4 1608 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 PDE4AP27815 886 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 FOXK1P85037 733 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 NBPF1Q3BBV0 1214 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 LINC00116Q8NCU8 138 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 LTBP1Q14766 1721 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 NSD3Q9BZ95 1437 aa8.7□□□□□ -1.02
NDEL1-216ENST00000583066 MON2Q7Z3U7 1717 aa8.69□□□□□ -1.02
NDEL1-216ENST00000583066 SSFA2P28290 1259 aa8.69□□□□□ -1.02
NDEL1-216ENST00000583066 DSG2Q14126 1118 aa8.69□□□□□ -1.02
NDEL1-216ENST00000583066 CASP8AP2Q9UKL3 1982 aa8.69□□□□□ -1.02
NDEL1-216ENST00000583066 MFSD10Q14728 455 aa8.68□□□□□ -1.02
NDEL1-216ENST00000583066 NGEFQ8N5V2 710 aa8.68□□□□□ -1.02
NDEL1-216ENST00000583066 TSKSQ9UJT2 592 aa8.68□□□□□ -1.02
NDEL1-216ENST00000583066 PASKQ96RG2 1323 aa8.68□□□□□ -1.02
NDEL1-216ENST00000583066 SBNO2Q9Y2G9 1366 aa8.68□□□□□ -1.02
NDEL1-216ENST00000583066 GNPATO15228 680 aa8.67□□□□□ -1.02
NDEL1-216ENST00000583066 CHRNA5P30532 468 aa8.67□□□□□ -1.02
NDEL1-216ENST00000583066 DALRD3Q5D0E6 543 aaKnown RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 PRPF38BQ5VTL8 546 aaKnown RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 LTV1Q96GA3 475 aaPredicted RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 PUS7Q96PZ0 661 aaKnown RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 LARP6Q9BRS8 491 aaKnown RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 MCOLN1Q9GZU1 580 aa8.67□□□□□ -1.02
NDEL1-216ENST00000583066 PANK3Q9H999 370 aa8.67□□□□□ -1.02
NDEL1-216ENST00000583066 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
NDEL1-216ENST00000583066 KNSTRNQ9Y448 316 aa8.67□□□□□ -1.02
NDEL1-216ENST00000583066 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
NDEL1-216ENST00000583066 ZCRB1Q8TBF4 217 aaKnown RBP8.66□□□□□ -1.02
NDEL1-216ENST00000583066 PIM2Q9P1W9 311 aa8.66□□□□□ -1.02
NDEL1-216ENST00000583066 DICER1Q9UPY3 1922 aaKnown RBP8.66□□□□□ -1.02
NDEL1-216ENST00000583066 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
NDEL1-216ENST00000583066 ITPK1Q13572 414 aa8.65□□□□□ -1.02
NDEL1-216ENST00000583066 MPRIPQ6WCQ1 1025 aa8.65□□□□□ -1.02
NDEL1-216ENST00000583066 CCDC87Q9NVE4 849 aa8.65□□□□□ -1.02
NDEL1-216ENST00000583066 DLEC1Q9Y238 1755 aa8.64□□□□□ -1.03
NDEL1-216ENST00000583066 LMNB1P20700 586 aa8.64□□□□□ -1.03
NDEL1-216ENST00000583066 SOX10P56693 466 aa8.64□□□□□ -1.03
NDEL1-216ENST00000583066 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
NDEL1-216ENST00000583066 PPP1R15BQ5SWA1 713 aa8.64□□□□□ -1.03
NDEL1-216ENST00000583066 USP31Q70CQ4 1352 aa8.63□□□□□ -1.03
NDEL1-216ENST00000583066 WDR33Q9C0J8 1336 aaKnown RBP8.63□□□□□ -1.03
NDEL1-216ENST00000583066 FANCIQ9NVI1 1328 aa8.63□□□□□ -1.03
NDEL1-216ENST00000583066 TMEM88BA6NKF7 163 aa8.63□□□□□ -1.03
NDEL1-216ENST00000583066 NME9Q86XW9 330 aa8.63□□□□□ -1.03
NDEL1-216ENST00000583066 DDX27Q96GQ7 796 aaKnown RBP8.63□□□□□ -1.03
NDEL1-216ENST00000583066 RBM19Q9Y4C8 960 aaKnown RBP8.63□□□□□ -1.03
NDEL1-216ENST00000583066 ADAMTSL1Q8N6G6 1762 aa8.63□□□□□ -1.03
NDEL1-216ENST00000583066 COL5A3P25940 1745 aaPredicted RBP8.63□□□□□ -1.03
NDEL1-216ENST00000583066 CENPJQ9HC77 1338 aaPredicted RBP8.62□□□□□ -1.03
NDEL1-216ENST00000583066 RASSF10A6NK89 507 aa8.62□□□□□ -1.03
NDEL1-216ENST00000583066 MAP2K1Q02750 393 aaPredicted RBP8.62□□□□□ -1.03
NDEL1-216ENST00000583066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.62□□□□□ -1.03
NDEL1-216ENST00000583066 MYH14Q7Z406 1995 aaKnown RBP8.61□□□□□ -1.03
NDEL1-216ENST00000583066 LOC102724428A0A0B4J2F2 783 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 NFKBIEO00221 500 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 ITGBL1O95965 494 aaPredicted RBP8.61□□□□□ -1.03
NDEL1-216ENST00000583066 GYS1P13807 737 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 SIK1P57059 783 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 DDR1Q08345 913 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 GPR153Q6NV75 609 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 NLGN1Q8N2Q7 840 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 USHBP1Q8N6Y0 703 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 PARP3Q9Y6F1 533 aa8.61□□□□□ -1.03
NDEL1-216ENST00000583066 AFDNP55196 1824 aaKnown RBP8.61□□□□□ -1.03
NDEL1-216ENST00000583066 EMP3P54852 163 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 WDR43Q15061 677 aaKnown RBP eCLIP8.6□□□□□ -1.03
NDEL1-216ENST00000583066 DEFB115Q30KQ5 88 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 PIGBQ92521 554 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 IP6K1Q92551 441 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
NDEL1-216ENST00000583066 MARVELD3Q96A59 401 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 ZSWIM6Q9HCJ5 1215 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 RCAN3Q9UKA8 241 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 CUL9Q8IWT3 2517 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 FER1L6Q2WGJ9 1857 aa8.6□□□□□ -1.03
NDEL1-216ENST00000583066 SCN4AP35499 1836 aa8.59□□□□□ -1.03
NDEL1-216ENST00000583066 PPP2R1AP30153 589 aa8.59□□□□□ -1.03
NDEL1-216ENST00000583066 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
NDEL1-216ENST00000583066 DGKZQ13574 1117 aa8.59□□□□□ -1.03
NDEL1-216ENST00000583066 CC2D1BQ5T0F9 858 aaKnown RBP8.59□□□□□ -1.03
NDEL1-216ENST00000583066 ZNF710Q8N1W2 664 aa8.59□□□□□ -1.03
NDEL1-216ENST00000583066 ARHGEF1Q92888 912 aaKnown RBP8.59□□□□□ -1.03
NDEL1-216ENST00000583066 CCDC136Q96JN2 1154 aa8.59□□□□□ -1.03
NDEL1-216ENST00000583066 CD163L1Q9NR16 1453 aa8.58□□□□□ -1.04
NDEL1-216ENST00000583066 RIMBP2O15034 1052 aa8.58□□□□□ -1.04
NDEL1-216ENST00000583066 CYP27B1O15528 508 aa8.58□□□□□ -1.04
NDEL1-216ENST00000583066 DDNO94850 711 aaPredicted RBP8.58□□□□□ -1.04
NDEL1-216ENST00000583066 HOXB1P14653 301 aaPredicted RBP8.58□□□□□ -1.04
NDEL1-216ENST00000583066 TRAPPC3LQ5T215 181 aa8.58□□□□□ -1.04
NDEL1-216ENST00000583066 LDHDQ86WU2 507 aa8.58□□□□□ -1.04
NDEL1-216ENST00000583066 PTCD2Q8WV60 388 aaKnown RBP8.58□□□□□ -1.04
NDEL1-216ENST00000583066 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms