RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
GGA3-212ENST00000582376 PRR5LQ6MZQ0 368 aa12.81□□□□□ -0.36
GGA3-212ENST00000582376 TLL2Q9Y6L7 1015 aa12.81□□□□□ -0.36
GGA3-212ENST00000582376 SLX4Q8IY92 1834 aa12.81□□□□□ -0.36
GGA3-212ENST00000582376 FMR1Q06787 632 aaKnown RBP eCLIP12.8□□□□□ -0.36
GGA3-212ENST00000582376 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
GGA3-212ENST00000582376 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
GGA3-212ENST00000582376 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
GGA3-212ENST00000582376 POLKQ9UBT6 870 aa12.8□□□□□ -0.36
GGA3-212ENST00000582376 SRGNP10124 158 aa12.79□□□□□ -0.36
GGA3-212ENST00000582376 BRPF1P55201 1214 aaPredicted RBP12.79□□□□□ -0.36
GGA3-212ENST00000582376 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
GGA3-212ENST00000582376 CST9Q5W186 159 aa12.79□□□□□ -0.36
GGA3-212ENST00000582376 A0A087WZG4 1122 aa12.78□□□□□ -0.36
GGA3-212ENST00000582376 NPHP1O15259 732 aa12.78□□□□□ -0.36
GGA3-212ENST00000582376 TNRC18O15417 2968 aaPredicted RBP12.78□□□□□ -0.36
GGA3-212ENST00000582376 CANXP27824 592 aaKnown RBP12.78□□□□□ -0.36
GGA3-212ENST00000582376 GPC2Q8N158 579 aa12.78□□□□□ -0.36
GGA3-212ENST00000582376 CACNA1SQ13698 1873 aa12.78□□□□□ -0.36
GGA3-212ENST00000582376 ARFGEF2Q9Y6D5 1785 aa12.77□□□□□ -0.36
GGA3-212ENST00000582376 FZD9O00144 591 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 LMOD1P29536 600 aaPredicted RBP12.77□□□□□ -0.37
GGA3-212ENST00000582376 ST5P78524 1137 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 CNBD1Q8NA66 436 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 CARD14Q9BXL6 1004 aa12.77□□□□□ -0.37
GGA3-212ENST00000582376 TRPM7Q96QT4 1865 aa12.76□□□□□ -0.37
GGA3-212ENST00000582376 TRAF5O00463 557 aa12.76□□□□□ -0.37
GGA3-212ENST00000582376 CIAPIN1Q6FI81 312 aa12.76□□□□□ -0.37
GGA3-212ENST00000582376 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
GGA3-212ENST00000582376 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
GGA3-212ENST00000582376 SLC39A6Q13433 755 aa12.75□□□□□ -0.37
GGA3-212ENST00000582376 SAPCD2Q86UD0 394 aa12.75□□□□□ -0.37
GGA3-212ENST00000582376 RTKN2Q8IZC4 609 aa12.75□□□□□ -0.37
GGA3-212ENST00000582376 HHIPL1Q96JK4 782 aa12.75□□□□□ -0.37
GGA3-212ENST00000582376 SLC52A2Q9HAB3 445 aa12.75□□□□□ -0.37
GGA3-212ENST00000582376 EIF6P56537 245 aaKnown RBP12.74□□□□□ -0.37
GGA3-212ENST00000582376 VSIG10Q8N0Z9 540 aa12.74□□□□□ -0.37
GGA3-212ENST00000582376 JDP2Q8WYK2 163 aa12.74□□□□□ -0.37
GGA3-212ENST00000582376 SETDB2Q96T68 719 aa12.74□□□□□ -0.37
GGA3-212ENST00000582376 GJA3Q9Y6H8 435 aa12.74□□□□□ -0.37
GGA3-212ENST00000582376 CELF2O95319 508 aaKnown RBP12.73□□□□□ -0.37
GGA3-212ENST00000582376 NPR1P16066 1061 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 EPS15P42566 896 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 CDCA8Q53HL2 280 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
GGA3-212ENST00000582376 SYNE4Q8N205 404 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 SCN11AQ9UI33 1791 aa12.73□□□□□ -0.37
GGA3-212ENST00000582376 STARD3NLO95772 234 aa12.72□□□□□ -0.37
GGA3-212ENST00000582376 TBC1D2BQ9UPU7 963 aa12.72□□□□□ -0.37
GGA3-212ENST00000582376 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
GGA3-212ENST00000582376 TNNT2P45379 298 aaPredicted RBP12.71□□□□□ -0.37
GGA3-212ENST00000582376 SCNN1DP51172 638 aa12.71□□□□□ -0.37
GGA3-212ENST00000582376 NOGQ13253 232 aa12.71□□□□□ -0.37
GGA3-212ENST00000582376 AKAP4Q5JQC9 854 aa12.71□□□□□ -0.37
GGA3-212ENST00000582376 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
GGA3-212ENST00000582376 AEBP1Q8IUX7 1158 aa12.71□□□□□ -0.37
GGA3-212ENST00000582376 ZNF330Q9Y3S2 320 aaPredicted RBP12.71□□□□□ -0.37
GGA3-212ENST00000582376 HABP4Q5JVS0 413 aaKnown RBP12.7□□□□□ -0.38
GGA3-212ENST00000582376 LGR6Q9HBX8 967 aa12.7□□□□□ -0.38
GGA3-212ENST00000582376 RNMTO43148 476 aaKnown RBP12.69□□□□□ -0.38
GGA3-212ENST00000582376 NPM2Q86SE8 214 aaKnown RBP12.69□□□□□ -0.38
GGA3-212ENST00000582376 ZIC5Q96T25 663 aa12.69□□□□□ -0.38
GGA3-212ENST00000582376 SAGE1Q9NXZ1 904 aa12.69□□□□□ -0.38
GGA3-212ENST00000582376 MRC1P22897 1456 aa12.69□□□□□ -0.38
GGA3-212ENST00000582376 SULT6B1Q6IMI4 303 aa12.68□□□□□ -0.38
GGA3-212ENST00000582376 NBPF5PQ86XG9 351 aaPredicted RBP12.68□□□□□ -0.38
GGA3-212ENST00000582376 PSMD1Q99460 953 aa12.68□□□□□ -0.38
GGA3-212ENST00000582376 ZNF408Q9H9D4 720 aa12.68□□□□□ -0.38
GGA3-212ENST00000582376 BCORQ6W2J9 1755 aa12.68□□□□□ -0.38
GGA3-212ENST00000582376 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
GGA3-212ENST00000582376 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
GGA3-212ENST00000582376 ALDH1B1P30837 517 aa12.67□□□□□ -0.38
GGA3-212ENST00000582376 IL6STP40189 918 aaPredicted RBP12.67□□□□□ -0.38
GGA3-212ENST00000582376 CTU1Q7Z7A3 348 aaKnown RBP12.67□□□□□ -0.38
GGA3-212ENST00000582376 GLIS2Q9BZE0 524 aaPredicted RBP12.67□□□□□ -0.38
GGA3-212ENST00000582376 ADARB2Q9NS39 739 aaKnown RBP12.67□□□□□ -0.38
GGA3-212ENST00000582376 TTC5Q8N0Z6 440 aa12.66□□□□□ -0.38
GGA3-212ENST00000582376 LARGE2Q8N3Y3 721 aa12.65□□□□□ -0.38
GGA3-212ENST00000582376 TEX13AQ9BXU3 409 aaPredicted RBP12.65□□□□□ -0.38
GGA3-212ENST00000582376 HPS5Q9UPZ3 1129 aa12.65□□□□□ -0.38
GGA3-212ENST00000582376 COL4A5P29400 1685 aa12.64□□□□□ -0.39
GGA3-212ENST00000582376 TRPA1O75762 1119 aa12.64□□□□□ -0.39
GGA3-212ENST00000582376 HUNKP57058 714 aa12.64□□□□□ -0.39
GGA3-212ENST00000582376 GPRC5DQ9NZD1 345 aa12.64□□□□□ -0.39
GGA3-212ENST00000582376 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
GGA3-212ENST00000582376 SNED1Q8TER0 1413 aa12.63□□□□□ -0.39
GGA3-212ENST00000582376 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
GGA3-212ENST00000582376 TPTE2Q6XPS3 522 aa12.63□□□□□ -0.39
GGA3-212ENST00000582376 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
GGA3-212ENST00000582376 NIM1KQ8IY84 436 aa12.63□□□□□ -0.39
GGA3-212ENST00000582376 RNF186Q9NXI6 227 aa12.63□□□□□ -0.39
GGA3-212ENST00000582376 HEG1Q9ULI3 1381 aa12.62□□□□□ -0.39
GGA3-212ENST00000582376 A1BGP04217 495 aa12.62□□□□□ -0.39
GGA3-212ENST00000582376 KIF23Q02241 960 aaPredicted RBP12.62□□□□□ -0.39
GGA3-212ENST00000582376 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
GGA3-212ENST00000582376 RGMBQ6NW40 437 aa12.62□□□□□ -0.39
GGA3-212ENST00000582376 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms