RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 SLC4A2P04920 1241 aa25.72■■□□□ 1.71
TOP3A-213ENST00000582230 POLD1P28340 1107 aa25.72■■□□□ 1.71
TOP3A-213ENST00000582230 AIMP1Q12904 312 aaKnown RBP25.72■■□□□ 1.71
TOP3A-213ENST00000582230 YTHDC1Q96MU7 727 aaKnown RBP25.72■■□□□ 1.71
TOP3A-213ENST00000582230 BCL2L12Q9HB09 334 aa25.72■■□□□ 1.71
TOP3A-213ENST00000582230 TCERG1O14776 1098 aaKnown RBP25.71■■□□□ 1.71
TOP3A-213ENST00000582230 FKBP8Q14318 412 aa25.71■■□□□ 1.71
TOP3A-213ENST00000582230 PTGER2P43116 358 aa25.69■■□□□ 1.7
TOP3A-213ENST00000582230 PHAXQ9H814 394 aaKnown RBP25.69■■□□□ 1.7
TOP3A-213ENST00000582230 DDX58O95786 925 aaKnown RBP25.68■■□□□ 1.7
TOP3A-213ENST00000582230 ALDH1L2Q3SY69 923 aa25.68■■□□□ 1.7
TOP3A-213ENST00000582230 ANKRD13DQ6ZTN6 518 aa25.68■■□□□ 1.7
TOP3A-213ENST00000582230 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
TOP3A-213ENST00000582230 SGIP1Q9BQI5 828 aa25.68■■□□□ 1.7
TOP3A-213ENST00000582230 ZBTB3Q9H5J0 574 aa25.68■■□□□ 1.7
TOP3A-213ENST00000582230 TM4SF1P30408 202 aa25.67■■□□□ 1.7
TOP3A-213ENST00000582230 MMP10P09238 476 aa25.66■■□□□ 1.7
TOP3A-213ENST00000582230 HLFQ16534 295 aa25.66■■□□□ 1.7
TOP3A-213ENST00000582230 GIGYF2Q6Y7W6 1299 aaKnown RBP25.66■■□□□ 1.7
TOP3A-213ENST00000582230 SCN7AQ01118 1682 aa25.65■■□□□ 1.7
TOP3A-213ENST00000582230 NFIXQ14938 502 aa25.65■■□□□ 1.7
TOP3A-213ENST00000582230 TBC1D9BQ66K14 1250 aa25.65■■□□□ 1.7
TOP3A-213ENST00000582230 FLIIQ13045 1269 aa25.64■■□□□ 1.7
TOP3A-213ENST00000582230 SSH1Q8WYL5 1049 aa25.64■■□□□ 1.7
TOP3A-213ENST00000582230 SETDB2Q96T68 719 aa25.64■■□□□ 1.7
TOP3A-213ENST00000582230 PARP3Q9Y6F1 533 aa25.64■■□□□ 1.7
TOP3A-213ENST00000582230 HSP90AB3PQ58FF7 597 aa25.63■■□□□ 1.69
TOP3A-213ENST00000582230 G2E3Q7L622 706 aa25.63■■□□□ 1.69
TOP3A-213ENST00000582230 RIC3Q7Z5B4 369 aa25.63■■□□□ 1.69
TOP3A-213ENST00000582230 COL24A1Q17RW2 1714 aa25.63■■□□□ 1.69
TOP3A-213ENST00000582230 BICDL1Q6ZP65 573 aa25.62■■□□□ 1.69
TOP3A-213ENST00000582230 MRPL50Q8N5N7 158 aaKnown RBP25.62■■□□□ 1.69
TOP3A-213ENST00000582230 BCORQ6W2J9 1755 aa25.61■■□□□ 1.69
TOP3A-213ENST00000582230 RARSP54136 660 aaKnown RBP25.61■■□□□ 1.69
TOP3A-213ENST00000582230 KSR2Q6VAB6 950 aa25.61■■□□□ 1.69
TOP3A-213ENST00000582230 SMC4Q9NTJ3 1288 aa25.61■■□□□ 1.69
TOP3A-213ENST00000582230 NIP7Q9Y221 180 aaKnown RBP eCLIP25.61■■□□□ 1.69
TOP3A-213ENST00000582230 ATP10DQ9P241 1426 aa25.61■■□□□ 1.69
TOP3A-213ENST00000582230 CARMIL3Q8ND23 1372 aa25.6■■□□□ 1.69
TOP3A-213ENST00000582230 POLRMTO00411 1230 aaKnown RBP25.6■■□□□ 1.69
TOP3A-213ENST00000582230 DDR1Q08345 913 aa25.6■■□□□ 1.69
TOP3A-213ENST00000582230 FKBP5Q13451 457 aaPredicted RBP25.6■■□□□ 1.69
TOP3A-213ENST00000582230 TCIRG1Q13488 830 aa25.6■■□□□ 1.69
TOP3A-213ENST00000582230 PPP1R1BQ9UD71 204 aaPredicted RBP25.6■■□□□ 1.69
TOP3A-213ENST00000582230 BRPF1P55201 1214 aaPredicted RBP25.59■■□□□ 1.69
TOP3A-213ENST00000582230 ZNF34Q8IZ26 560 aa25.59■■□□□ 1.69
TOP3A-213ENST00000582230 LRP5O75197 1615 aa25.59■■□□□ 1.69
TOP3A-213ENST00000582230 PI4KAP2A4QPH2 592 aa25.58■■□□□ 1.69
TOP3A-213ENST00000582230 PI4KAP1Q8N8J0 262 aa25.58■■□□□ 1.69
TOP3A-213ENST00000582230 BCL2L13Q9BXK5 485 aa25.58■■□□□ 1.69
TOP3A-213ENST00000582230 MAP3K2Q9Y2U5 619 aa25.58■■□□□ 1.69
TOP3A-213ENST00000582230 SERPINB2P05120 415 aa25.57■■□□□ 1.68
TOP3A-213ENST00000582230 PARP10Q53GL7 1025 aa25.57■■□□□ 1.68
TOP3A-213ENST00000582230 PTPRCP08575 1304 aa25.57■■□□□ 1.68
TOP3A-213ENST00000582230 METTL22Q9BUU2 404 aaPredicted RBP25.56■■□□□ 1.68
TOP3A-213ENST00000582230 GPTP24298 496 aa25.55■■□□□ 1.68
TOP3A-213ENST00000582230 TRIM28Q13263 835 aaKnown RBP25.55■■□□□ 1.68
TOP3A-213ENST00000582230 ADCY9O60503 1353 aa25.55■■□□□ 1.68
TOP3A-213ENST00000582230 CACNA1FO60840 1977 aa25.55■■□□□ 1.68
TOP3A-213ENST00000582230 NEXNQ0ZGT2 675 aa25.54■■□□□ 1.68
TOP3A-213ENST00000582230 TPTE2Q6XPS3 522 aa25.54■■□□□ 1.68
TOP3A-213ENST00000582230 NBPF5PQ86XG9 351 aaPredicted RBP25.54■■□□□ 1.68
TOP3A-213ENST00000582230 ISCA1Q9BUE6 129 aa25.54■■□□□ 1.68
TOP3A-213ENST00000582230 PPP1R42Q7Z4L9 355 aa25.53■■□□□ 1.68
TOP3A-213ENST00000582230 DNAAF4Q8WXU2 420 aa25.53■■□□□ 1.68
TOP3A-213ENST00000582230 NYXQ9GZU5 481 aa25.53■■□□□ 1.68
TOP3A-213ENST00000582230 UBN2Q6ZU65 1347 aa25.53■■□□□ 1.68
TOP3A-213ENST00000582230 KIF16BQ96L93 1317 aa25.53■■□□□ 1.68
TOP3A-213ENST00000582230 NPHP1O15259 732 aa25.52■■□□□ 1.68
TOP3A-213ENST00000582230 NLRP10Q86W26 655 aa25.52■■□□□ 1.68
TOP3A-213ENST00000582230 CNBD1Q8NA66 436 aa25.52■■□□□ 1.68
TOP3A-213ENST00000582230 MYD88Q99836 296 aa25.52■■□□□ 1.68
TOP3A-213ENST00000582230 CD2APQ9Y5K6 639 aa25.52■■□□□ 1.68
TOP3A-213ENST00000582230 IBTKQ9P2D0 1353 aaPredicted RBP25.51■■□□□ 1.67
TOP3A-213ENST00000582230 NUP98P52948 1817 aa25.51■■□□□ 1.67
TOP3A-213ENST00000582230 ATP5J2-PTCD1G3V325 749 aa25.5■■□□□ 1.67
TOP3A-213ENST00000582230 SUSD4Q5VX71 490 aa25.5■■□□□ 1.67
TOP3A-213ENST00000582230 NOB1Q9ULX3 412 aaKnown RBP25.5■■□□□ 1.67
TOP3A-213ENST00000582230 RNF123Q5XPI4 1314 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 IPO8O15397 1037 aaKnown RBP25.49■■□□□ 1.67
TOP3A-213ENST00000582230 BCAR3O75815 825 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 GTF2E1P29083 439 aaPredicted RBP25.49■■□□□ 1.67
TOP3A-213ENST00000582230 ST5P78524 1137 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 PRR5LQ6MZQ0 368 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 CCDC191Q8NCU4 936 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 ARHGAP45Q92619 1136 aa25.49■■□□□ 1.67
TOP3A-213ENST00000582230 UTP14AQ9BVJ6 771 aaKnown RBP25.49■■□□□ 1.67
TOP3A-213ENST00000582230 FAM177BA6PVY3 158 aa25.48■■□□□ 1.67
TOP3A-213ENST00000582230 F6X3S4 739 aa25.48■■□□□ 1.67
TOP3A-213ENST00000582230 LINS1Q8NG48 757 aa25.48■■□□□ 1.67
TOP3A-213ENST00000582230 FHDC1Q9C0D6 1143 aaPredicted RBP25.48■■□□□ 1.67
TOP3A-213ENST00000582230 C10orf71Q711Q0 1435 aa25.47■■□□□ 1.67
TOP3A-213ENST00000582230 ARFGEF2Q9Y6D5 1785 aa25.47■■□□□ 1.67
TOP3A-213ENST00000582230 NTSR2O95665 410 aa25.47■■□□□ 1.67
TOP3A-213ENST00000582230 KLHL34Q8N239 644 aa25.47■■□□□ 1.67
TOP3A-213ENST00000582230 API5Q9BZZ5 524 aaKnown RBP25.47■■□□□ 1.67
TOP3A-213ENST00000582230 RCAN3Q9UKA8 241 aa25.47■■□□□ 1.67
TOP3A-213ENST00000582230 NRXN2Q9P2S2 1712 aa25.46■■□□□ 1.67
TOP3A-213ENST00000582230 IGKV5-2P06315 115 aa25.46■■□□□ 1.67
TOP3A-213ENST00000582230 CWC25Q9NXE8 425 aaPredicted RBP25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms