RNA–Protein interactions for RNA: ENST00000582055.1

LIMD2-210, Transcript of LIM domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMD2, Length 509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-210ENST00000582055 U2AF1Q01081 240 aaKnown RBP eCLIP16.72■□□□□ 0.27
LIMD2-210ENST00000582055 CNBD1Q8NA66 436 aa16.72■□□□□ 0.27
LIMD2-210ENST00000582055 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
LIMD2-210ENST00000582055 JMYQ8N9B5 988 aa16.71■□□□□ 0.27
LIMD2-210ENST00000582055 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
LIMD2-210ENST00000582055 SNRPA1P09661 255 aaKnown RBP16.7■□□□□ 0.26
LIMD2-210ENST00000582055 PPP2R1AP30153 589 aa16.7■□□□□ 0.26
LIMD2-210ENST00000582055 ERFEQ4G0M1 354 aa16.7■□□□□ 0.26
LIMD2-210ENST00000582055 STYK1Q6J9G0 422 aa16.7■□□□□ 0.26
LIMD2-210ENST00000582055 MCM10Q7L590 875 aa16.7■□□□□ 0.26
LIMD2-210ENST00000582055 DLG5Q8TDM6 1919 aa16.7■□□□□ 0.26
LIMD2-210ENST00000582055 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
LIMD2-210ENST00000582055 POTECB2RU33 542 aa16.69■□□□□ 0.26
LIMD2-210ENST00000582055 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
LIMD2-210ENST00000582055 SRGNP10124 158 aa16.69■□□□□ 0.26
LIMD2-210ENST00000582055 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
LIMD2-210ENST00000582055 MASTLQ96GX5 879 aa16.69■□□□□ 0.26
LIMD2-210ENST00000582055 LTBP3Q9NS15 1303 aa16.69■□□□□ 0.26
LIMD2-210ENST00000582055 SOGA3Q5TF21 947 aa16.68■□□□□ 0.26
LIMD2-210ENST00000582055 TAOK3Q9H2K8 898 aa16.68■□□□□ 0.26
LIMD2-210ENST00000582055 ZNF652Q9Y2D9 606 aa16.68■□□□□ 0.26
LIMD2-210ENST00000582055 DCTN1Q14203 1278 aa16.67■□□□□ 0.26
LIMD2-210ENST00000582055 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
LIMD2-210ENST00000582055 TAF7Q15545 349 aaPredicted RBP16.66■□□□□ 0.26
LIMD2-210ENST00000582055 PRPF40BQ6NWY9 871 aaKnown RBP16.66■□□□□ 0.26
LIMD2-210ENST00000582055 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
LIMD2-210ENST00000582055 NUP98P52948 1817 aa16.65■□□□□ 0.26
LIMD2-210ENST00000582055 NBPF26B4DH59 902 aa16.64■□□□□ 0.25
LIMD2-210ENST00000582055 RGL2O15211 777 aa16.64■□□□□ 0.25
LIMD2-210ENST00000582055 NBPF10Q6P3W6 841 aaKnown RBP16.64■□□□□ 0.25
LIMD2-210ENST00000582055 NBPF15Q8N660 670 aa16.64■□□□□ 0.25
LIMD2-210ENST00000582055 NIP7Q9Y221 180 aaKnown RBP eCLIP16.64■□□□□ 0.25
LIMD2-210ENST00000582055 LAMB4A4D0S4 1761 aa16.64■□□□□ 0.25
LIMD2-210ENST00000582055 SCN4AP35499 1836 aa16.63■□□□□ 0.25
LIMD2-210ENST00000582055 KLRG2A4D1S0 409 aaPredicted RBP16.63■□□□□ 0.25
LIMD2-210ENST00000582055 DDNO94850 711 aaPredicted RBP16.63■□□□□ 0.25
LIMD2-210ENST00000582055 NEFMP07197 916 aa16.63■□□□□ 0.25
LIMD2-210ENST00000582055 NPR1P16066 1061 aa16.63■□□□□ 0.25
LIMD2-210ENST00000582055 C7orf43Q8WVR3 580 aa16.63■□□□□ 0.25
LIMD2-210ENST00000582055 MIS18AQ9NYP9 233 aa16.62■□□□□ 0.25
LIMD2-210ENST00000582055 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
LIMD2-210ENST00000582055 CCDC93Q567U6 631 aa16.61■□□□□ 0.25
LIMD2-210ENST00000582055 COL13A1Q5TAT6 717 aaPredicted RBP16.61■□□□□ 0.25
LIMD2-210ENST00000582055 CHADLQ6NUI6 762 aa16.61■□□□□ 0.25
LIMD2-210ENST00000582055 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
LIMD2-210ENST00000582055 GTF2E1P29083 439 aaPredicted RBP16.6■□□□□ 0.25
LIMD2-210ENST00000582055 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
LIMD2-210ENST00000582055 HLFQ16534 295 aa16.6■□□□□ 0.25
LIMD2-210ENST00000582055 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
LIMD2-210ENST00000582055 FKBP4Q02790 459 aaKnown RBP eCLIP16.59■□□□□ 0.25
LIMD2-210ENST00000582055 IQCA1LA6NCM1 817 aa16.58■□□□□ 0.24
LIMD2-210ENST00000582055 RTKN2Q8IZC4 609 aa16.58■□□□□ 0.24
LIMD2-210ENST00000582055 NGEFQ8N5V2 710 aa16.58■□□□□ 0.24
LIMD2-210ENST00000582055 PCNTO95613 3336 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 ERVV-1B6SEH8 477 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 POTEIP0CG38 1075 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 POTEJP0CG39 1038 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
LIMD2-210ENST00000582055 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 NYXQ9GZU5 481 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 CREBZFQ9NS37 354 aa16.57■□□□□ 0.24
LIMD2-210ENST00000582055 EIF4A1P60842 406 aaKnown RBP16.56■□□□□ 0.24
LIMD2-210ENST00000582055 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
LIMD2-210ENST00000582055 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
LIMD2-210ENST00000582055 ZNF277Q9NRM2 450 aaPredicted RBP16.56■□□□□ 0.24
LIMD2-210ENST00000582055 RRP7AQ9Y3A4 280 aaKnown RBP16.56■□□□□ 0.24
LIMD2-210ENST00000582055 HSPA1AP0DMV8 641 aaKnown RBP16.55■□□□□ 0.24
LIMD2-210ENST00000582055 HSPA1BP0DMV9 641 aaKnown RBP16.55■□□□□ 0.24
LIMD2-210ENST00000582055 NFE2L2Q16236 605 aa16.55■□□□□ 0.24
LIMD2-210ENST00000582055 MAP3K15Q6ZN16 1313 aa16.54■□□□□ 0.24
LIMD2-210ENST00000582055 KIF6Q6ZMV9 814 aa16.54■□□□□ 0.24
LIMD2-210ENST00000582055 LDHDQ86WU2 507 aa16.54■□□□□ 0.24
LIMD2-210ENST00000582055 SYNE4Q8N205 404 aa16.54■□□□□ 0.24
LIMD2-210ENST00000582055 TAF1DQ9H5J8 278 aaPredicted RBP16.54■□□□□ 0.24
LIMD2-210ENST00000582055 MYL6BP14649 208 aa16.53■□□□□ 0.24
LIMD2-210ENST00000582055 IARSP41252 1262 aaKnown RBP16.53■□□□□ 0.24
LIMD2-210ENST00000582055 CRY2Q49AN0 593 aa16.53■□□□□ 0.24
LIMD2-210ENST00000582055 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
LIMD2-210ENST00000582055 NUTM1Q86Y26 1132 aa16.53■□□□□ 0.24
LIMD2-210ENST00000582055 TNS4Q8IZW8 715 aa16.53■□□□□ 0.24
LIMD2-210ENST00000582055 ZNF541Q9H0D2 1346 aa16.52■□□□□ 0.24
LIMD2-210ENST00000582055 FZD9O00144 591 aa16.52■□□□□ 0.24
LIMD2-210ENST00000582055 CC2D2BQ6DHV5 1058 aa16.52■□□□□ 0.24
LIMD2-210ENST00000582055 THUMPD2Q9BTF0 503 aaKnown RBP16.52■□□□□ 0.24
LIMD2-210ENST00000582055 MKRN1Q9UHC7 482 aaKnown RBP16.52■□□□□ 0.24
LIMD2-210ENST00000582055 HACL1Q9UJ83 578 aa16.52■□□□□ 0.24
LIMD2-210ENST00000582055 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 MAPK8IP3Q9UPT6 1336 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
LIMD2-210ENST00000582055 JDP2Q8WYK2 163 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 RPGRQ92834 1020 aaKnown RBP16.51■□□□□ 0.23
LIMD2-210ENST00000582055 PSMD1Q99460 953 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 ZBTB3Q9H5J0 574 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
LIMD2-210ENST00000582055 GPTP24298 496 aa16.5■□□□□ 0.23
LIMD2-210ENST00000582055 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
LIMD2-210ENST00000582055 EPHX2P34913 555 aa16.5■□□□□ 0.23
LIMD2-210ENST00000582055 SUSD4Q5VX71 490 aa16.5■□□□□ 0.23
LIMD2-210ENST00000582055 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
LIMD2-210ENST00000582055 ZNF34Q8IZ26 560 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms