RNA–Protein interactions for RNA: ENST00000581394.1

TTC39C-207, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3

Gene TTC39C, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-207ENST00000581394 ALG2Q9H553 416 aa8.82□□□□□ -1
TTC39C-207ENST00000581394 NCOA4Q13772 614 aa8.81□□□□□ -1
TTC39C-207ENST00000581394 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
TTC39C-207ENST00000581394 LRRC69Q6ZNQ3 347 aa8.81□□□□□ -1
TTC39C-207ENST00000581394 SLC9A9Q8IVB4 645 aa8.81□□□□□ -1
TTC39C-207ENST00000581394 PSME1Q06323 249 aa8.8□□□□□ -1
TTC39C-207ENST00000581394 COL9A3Q14050 684 aaPredicted RBP8.8□□□□□ -1
TTC39C-207ENST00000581394 RSPO4Q2I0M5 234 aaPredicted RBP8.8□□□□□ -1
TTC39C-207ENST00000581394 COG6Q9Y2V7 657 aa8.8□□□□□ -1
TTC39C-207ENST00000581394 SFSWAPQ12872 951 aaKnown RBP8.79□□□□□ -1
TTC39C-207ENST00000581394 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
TTC39C-207ENST00000581394 ZMYM1Q5SVZ6 1142 aa8.79□□□□□ -1
TTC39C-207ENST00000581394 SLC30A3Q99726 388 aa8.79□□□□□ -1
TTC39C-207ENST00000581394 NEUROD4Q9HD90 331 aa8.79□□□□□ -1
TTC39C-207ENST00000581394 SERTM1A2A2V5 107 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 M0R082 166 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 APBA3O96018 575 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 ZNF417Q8TAU3 575 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 ZNF587Q96SQ5 575 aaPredicted RBP8.78□□□□□ -1
TTC39C-207ENST00000581394 ZNF232Q9UNY5 417 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 STARD13Q9Y3M8 1113 aa8.78□□□□□ -1
TTC39C-207ENST00000581394 POTEAQ6S8J7 498 aa8.77□□□□□ -1.01
TTC39C-207ENST00000581394 TNS4Q8IZW8 715 aa8.77□□□□□ -1.01
TTC39C-207ENST00000581394 MICALL1Q8N3F8 863 aa8.77□□□□□ -1.01
TTC39C-207ENST00000581394 USP17L5A8MUK1 530 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 ALBP02768 609 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 HIRAP54198 1017 aaPredicted RBP8.76□□□□□ -1.01
TTC39C-207ENST00000581394 SPEM2Q0P670 501 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 TBCELQ5QJ74 424 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 SH3PXD2AQ5TCZ1 1133 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 C1orf53Q5VUE5 145 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 TRIM50Q86XT4 487 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 RHPN1Q8TCX5 695 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 PSMG3-AS1Q96PY0 264 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 NACC1Q96RE7 527 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 TPSG1Q9NRR2 321 aa8.76□□□□□ -1.01
TTC39C-207ENST00000581394 NID1P14543 1247 aa8.75□□□□□ -1.01
TTC39C-207ENST00000581394 KCNQ4P56696 695 aa8.75□□□□□ -1.01
TTC39C-207ENST00000581394 PSMA6P60900 246 aaKnown RBP8.75□□□□□ -1.01
TTC39C-207ENST00000581394 NEUROD1Q13562 356 aa8.75□□□□□ -1.01
TTC39C-207ENST00000581394 TPRNQ4KMQ1 711 aa8.75□□□□□ -1.01
TTC39C-207ENST00000581394 ADH7P40394 386 aa8.74□□□□□ -1.01
TTC39C-207ENST00000581394 TRIM28Q13263 835 aaKnown RBP8.74□□□□□ -1.01
TTC39C-207ENST00000581394 WWC1Q8IX03 1113 aa8.74□□□□□ -1.01
TTC39C-207ENST00000581394 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
TTC39C-207ENST00000581394 ZBTB7BO15156 539 aaPredicted RBP8.73□□□□□ -1.01
TTC39C-207ENST00000581394 C20orf204Q6ZNR8 217 aa8.73□□□□□ -1.01
TTC39C-207ENST00000581394 PLEKHM2Q8IWE5 1019 aa8.73□□□□□ -1.01
TTC39C-207ENST00000581394 DEPDC4Q8N2C3 294 aa8.73□□□□□ -1.01
TTC39C-207ENST00000581394 ANKIB1Q9P2G1 1089 aa8.73□□□□□ -1.01
TTC39C-207ENST00000581394 FAM229AH3BQW9 127 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 M0R2N6 131 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 DYRK3O43781 588 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 ATP1A2P50993 1020 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 FOXD4L6Q3SYB3 417 aaPredicted RBP8.72□□□□□ -1.01
TTC39C-207ENST00000581394 FOXD4L3Q6VB84 417 aaPredicted RBP8.72□□□□□ -1.01
TTC39C-207ENST00000581394 C8orf86Q6ZUL3 223 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 TPCN2Q8NHX9 752 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 KIAA1024Q9UPX6 916 aa8.72□□□□□ -1.01
TTC39C-207ENST00000581394 TYRO3Q06418 890 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 CCDC102BQ68D86 513 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 CEP63Q96MT8 703 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 PHACTR1Q9C0D0 580 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 TSPAN10Q9H1Z9 355 aaPredicted RBP8.71□□□□□ -1.02
TTC39C-207ENST00000581394 KCNH4Q9UQ05 1017 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 CHMP3Q9Y3E7 222 aa8.71□□□□□ -1.02
TTC39C-207ENST00000581394 CLDN10P78369 228 aa8.7□□□□□ -1.02
TTC39C-207ENST00000581394 RAB44Q7Z6P3 723 aaPredicted RBP8.7□□□□□ -1.02
TTC39C-207ENST00000581394 HSH2DQ96JZ2 352 aa8.7□□□□□ -1.02
TTC39C-207ENST00000581394 C9orf172C9J069 976 aa8.69□□□□□ -1.02
TTC39C-207ENST00000581394 GRIK4Q16099 956 aa8.69□□□□□ -1.02
TTC39C-207ENST00000581394 SUSD3Q96L08 255 aa8.69□□□□□ -1.02
TTC39C-207ENST00000581394 HCN4Q9Y3Q4 1203 aa8.69□□□□□ -1.02
TTC39C-207ENST00000581394 USP17L3A6NCW0 530 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 USP17L4A6NCW7 530 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 SFI1A8K8P3 1242 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 LILRB5O75023 590 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 USP17L2Q6R6M4 530 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 USP17L1Q7RTZ2 530 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 LARGE2Q8N3Y3 721 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 POM121Q96HA1 1249 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 KRTAP9-2Q9BYQ4 174 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 EFCC1Q9HA90 598 aa8.68□□□□□ -1.02
TTC39C-207ENST00000581394 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.67□□□□□ -1.02
TTC39C-207ENST00000581394 ADGRE1Q14246 886 aa8.67□□□□□ -1.02
TTC39C-207ENST00000581394 SIX5Q8N196 739 aa8.67□□□□□ -1.02
TTC39C-207ENST00000581394 ZNF280CQ8ND82 737 aa8.67□□□□□ -1.02
TTC39C-207ENST00000581394 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
TTC39C-207ENST00000581394 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 PALM3A6NDB9 673 aaPredicted RBP8.66□□□□□ -1.02
TTC39C-207ENST00000581394 PRSS36Q5K4E3 855 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 TRAPPC3LQ5T215 181 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 STAG2Q8N3U4 1231 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 OGFOD1Q8N543 542 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 BHMTQ93088 406 aa8.66□□□□□ -1.02
TTC39C-207ENST00000581394 A0A0A0MRY4 1105 aa8.65□□□□□ -1.02
TTC39C-207ENST00000581394 ATP9BO43861 1147 aa8.65□□□□□ -1.02
TTC39C-207ENST00000581394 H2AFB1P0C5Y9 115 aa8.65□□□□□ -1.02
TTC39C-207ENST00000581394 H2AFB2P0C5Z0 115 aa8.65□□□□□ -1.02
TTC39C-207ENST00000581394 ELNP15502 786 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms