RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 FMNL2Q96PY5 1086 aa25.84■■□□□ 1.73
NDEL1-209ENST00000580738 KCNQ3O43525 872 aa25.83■■□□□ 1.73
NDEL1-209ENST00000580738 SOGA3Q5TF21 947 aa25.83■■□□□ 1.73
NDEL1-209ENST00000580738 C7orf43Q8WVR3 580 aa25.83■■□□□ 1.73
NDEL1-209ENST00000580738 TAF1DQ9H5J8 278 aaPredicted RBP25.83■■□□□ 1.73
NDEL1-209ENST00000580738 IQCA1LA6NCM1 817 aa25.82■■□□□ 1.72
NDEL1-209ENST00000580738 PER1O15534 1290 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-209ENST00000580738 PIP4K2AP48426 406 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-209ENST00000580738 NPM2Q86SE8 214 aaKnown RBP25.82■■□□□ 1.72
NDEL1-209ENST00000580738 LDHDQ86WU2 507 aa25.82■■□□□ 1.72
NDEL1-209ENST00000580738 DZIP3Q86Y13 1208 aaKnown RBP25.82■■□□□ 1.72
NDEL1-209ENST00000580738 L3MBTL3Q96JM7 780 aaPredicted RBP25.82■■□□□ 1.72
NDEL1-209ENST00000580738 U2SURPO15042 1029 aaKnown RBP25.81■■□□□ 1.72
NDEL1-209ENST00000580738 KIF7Q2M1P5 1343 aa25.81■■□□□ 1.72
NDEL1-209ENST00000580738 VEGFBP49765 207 aa25.8■■□□□ 1.72
NDEL1-209ENST00000580738 GAS2L2Q8NHY3 880 aa25.8■■□□□ 1.72
NDEL1-209ENST00000580738 USP16Q9Y5T5 823 aa25.8■■□□□ 1.72
NDEL1-209ENST00000580738 ITGBL1O95965 494 aaPredicted RBP25.79■■□□□ 1.72
NDEL1-209ENST00000580738 PRDM10Q9NQV6 1147 aa25.79■■□□□ 1.72
NDEL1-209ENST00000580738 CACNA1SQ13698 1873 aa25.79■■□□□ 1.72
NDEL1-209ENST00000580738 SIPA1L3O60292 1781 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-209ENST00000580738 EAPPQ56P03 285 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-209ENST00000580738 OLFM4Q6UX06 510 aa25.78■■□□□ 1.72
NDEL1-209ENST00000580738 NBPF5PQ86XG9 351 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-209ENST00000580738 ZNF541Q9H0D2 1346 aa25.78■■□□□ 1.72
NDEL1-209ENST00000580738 COL3A1P02461 1466 aaPredicted RBP25.78■■□□□ 1.72
NDEL1-209ENST00000580738 TMEM88BA6NKF7 163 aa25.77■■□□□ 1.72
NDEL1-209ENST00000580738 CCDC93Q567U6 631 aa25.77■■□□□ 1.72
NDEL1-209ENST00000580738 ZNF277Q9NRM2 450 aaPredicted RBP25.77■■□□□ 1.72
NDEL1-209ENST00000580738 CEMIPQ8WUJ3 1361 aa25.77■■□□□ 1.72
NDEL1-209ENST00000580738 PRAMEF22A3QJZ6 481 aa25.76■■□□□ 1.71
NDEL1-209ENST00000580738 BTBD11A6QL63 1104 aa25.76■■□□□ 1.71
NDEL1-209ENST00000580738 NPR1P16066 1061 aa25.75■■□□□ 1.71
NDEL1-209ENST00000580738 CTCFP49711 727 aaPredicted RBP25.75■■□□□ 1.71
NDEL1-209ENST00000580738 FKBP4Q02790 459 aaKnown RBP eCLIP25.75■■□□□ 1.71
NDEL1-209ENST00000580738 CNGB1Q14028 1251 aaPredicted RBP25.75■■□□□ 1.71
NDEL1-209ENST00000580738 AIDAQ96BJ3 306 aa25.75■■□□□ 1.71
NDEL1-209ENST00000580738 PHACTR3Q96KR7 559 aa25.75■■□□□ 1.71
NDEL1-209ENST00000580738 ARFGEF2Q9Y6D5 1785 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 KLRG2A4D1S0 409 aaPredicted RBP25.74■■□□□ 1.71
NDEL1-209ENST00000580738 CLEC4GQ6UXB4 293 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 HACL1Q9UJ83 578 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 CLEC11AQ9Y240 323 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 SCN4AP35499 1836 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 BCORQ6W2J9 1755 aa25.74■■□□□ 1.71
NDEL1-209ENST00000580738 WBP1LQ9NX94 342 aa25.73■■□□□ 1.71
NDEL1-209ENST00000580738 EPHX2P34913 555 aa25.71■■□□□ 1.71
NDEL1-209ENST00000580738 LBX1P52954 281 aa25.71■■□□□ 1.71
NDEL1-209ENST00000580738 RNF123Q5XPI4 1314 aa25.7■■□□□ 1.71
NDEL1-209ENST00000580738 FAM177BA6PVY3 158 aa25.7■■□□□ 1.7
NDEL1-209ENST00000580738 MAP1SQ66K74 1059 aaPredicted RBP25.7■■□□□ 1.7
NDEL1-209ENST00000580738 ZNF652Q9Y2D9 606 aa25.7■■□□□ 1.7
NDEL1-209ENST00000580738 TPTE2Q6XPS3 522 aa25.69■■□□□ 1.7
NDEL1-209ENST00000580738 RTKN2Q8IZC4 609 aa25.69■■□□□ 1.7
NDEL1-209ENST00000580738 CNTROBQ8N137 903 aa25.69■■□□□ 1.7
NDEL1-209ENST00000580738 NIP7Q9Y221 180 aaKnown RBP eCLIP25.69■■□□□ 1.7
NDEL1-209ENST00000580738 NBPF26B4DH59 902 aa25.68■■□□□ 1.7
NDEL1-209ENST00000580738 FZD9O00144 591 aa25.68■■□□□ 1.7
NDEL1-209ENST00000580738 PRKAR2BP31323 418 aa25.68■■□□□ 1.7
NDEL1-209ENST00000580738 NBPF10Q6P3W6 841 aaKnown RBP25.68■■□□□ 1.7
NDEL1-209ENST00000580738 NBPF15Q8N660 670 aa25.68■■□□□ 1.7
NDEL1-209ENST00000580738 ADAMTSL1Q8N6G6 1762 aa25.67■■□□□ 1.7
NDEL1-209ENST00000580738 RASSF10A6NK89 507 aa25.67■■□□□ 1.7
NDEL1-209ENST00000580738 SNRPA1P09661 255 aaKnown RBP25.67■■□□□ 1.7
NDEL1-209ENST00000580738 PNMA8AQ86V59 439 aaPredicted RBP25.67■■□□□ 1.7
NDEL1-209ENST00000580738 SYNE4Q8N205 404 aa25.67■■□□□ 1.7
NDEL1-209ENST00000580738 IARSP41252 1262 aaKnown RBP25.66■■□□□ 1.7
NDEL1-209ENST00000580738 DEFB115Q30KQ5 88 aa25.66■■□□□ 1.7
NDEL1-209ENST00000580738 RSPH6AQ9H0K4 717 aa25.66■■□□□ 1.7
NDEL1-209ENST00000580738 MCM10Q7L590 875 aa25.65■■□□□ 1.7
NDEL1-209ENST00000580738 HSPA8P11142 646 aaKnown RBP25.64■■□□□ 1.7
NDEL1-209ENST00000580738 HLFQ16534 295 aa25.64■■□□□ 1.7
NDEL1-209ENST00000580738 ALDH1B1P30837 517 aa25.63■■□□□ 1.69
NDEL1-209ENST00000580738 GPC2Q8N158 579 aa25.63■■□□□ 1.69
NDEL1-209ENST00000580738 WDR33Q9C0J8 1336 aaKnown RBP25.63■■□□□ 1.69
NDEL1-209ENST00000580738 NPC1L1Q9UHC9 1359 aa25.62■■□□□ 1.69
NDEL1-209ENST00000580738 ABT1Q9ULW3 272 aaKnown RBP25.62■■□□□ 1.69
NDEL1-209ENST00000580738 RGL2O15211 777 aa25.61■■□□□ 1.69
NDEL1-209ENST00000580738 ABHD8Q96I13 439 aa25.61■■□□□ 1.69
NDEL1-209ENST00000580738 GTF2E1P29083 439 aaPredicted RBP25.6■■□□□ 1.69
NDEL1-209ENST00000580738 FMR1Q06787 632 aaKnown RBP eCLIP25.6■■□□□ 1.69
NDEL1-209ENST00000580738 DCTN1Q14203 1278 aa25.6■■□□□ 1.69
NDEL1-209ENST00000580738 SNED1Q8TER0 1413 aa25.6■■□□□ 1.69
NDEL1-209ENST00000580738 MAP2K1Q02750 393 aaPredicted RBP25.59■■□□□ 1.69
NDEL1-209ENST00000580738 CCER1Q8TC90 406 aaPredicted RBP25.59■■□□□ 1.69
NDEL1-209ENST00000580738 JDP2Q8WYK2 163 aa25.59■■□□□ 1.69
NDEL1-209ENST00000580738 RTF1Q92541 710 aaKnown RBP25.59■■□□□ 1.69
NDEL1-209ENST00000580738 PSMD1Q99460 953 aa25.59■■□□□ 1.69
NDEL1-209ENST00000580738 DDX21Q9NR30 783 aaKnown RBP eCLIP25.59■■□□□ 1.69
NDEL1-209ENST00000580738 GJA3Q9Y6H8 435 aa25.59■■□□□ 1.69
NDEL1-209ENST00000580738 COL4A5P29400 1685 aa25.58■■□□□ 1.69
NDEL1-209ENST00000580738 CRY2Q49AN0 593 aa25.57■■□□□ 1.68
NDEL1-209ENST00000580738 NUTM1Q86Y26 1132 aa25.57■■□□□ 1.68
NDEL1-209ENST00000580738 ABCC12Q96J65 1359 aa25.56■■□□□ 1.68
NDEL1-209ENST00000580738 SLC51AQ86UW1 340 aa25.56■■□□□ 1.68
NDEL1-209ENST00000580738 EPS15P42566 896 aa25.55■■□□□ 1.68
NDEL1-209ENST00000580738 EIF6P56537 245 aaKnown RBP25.55■■□□□ 1.68
NDEL1-209ENST00000580738 NGEFQ8N5V2 710 aa25.55■■□□□ 1.68
NDEL1-209ENST00000580738 CFAP53Q96M91 514 aa25.55■■□□□ 1.68
NDEL1-209ENST00000580738 MIS18AQ9NYP9 233 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms