RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 SLX4Q8IY92 1834 aa19.66■□□□□ 0.74
CSNK1D-213ENST00000580446 MAP2K2P36507 400 aa19.65■□□□□ 0.74
CSNK1D-213ENST00000580446 SLC39A6Q13433 755 aa19.65■□□□□ 0.74
CSNK1D-213ENST00000580446 GJA3Q9Y6H8 435 aa19.65■□□□□ 0.74
CSNK1D-213ENST00000580446 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
CSNK1D-213ENST00000580446 KIF20BQ96Q89 1820 aa19.64■□□□□ 0.73
CSNK1D-213ENST00000580446 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
CSNK1D-213ENST00000580446 CA12O43570 354 aa19.62■□□□□ 0.73
CSNK1D-213ENST00000580446 EPS15P42566 896 aa19.62■□□□□ 0.73
CSNK1D-213ENST00000580446 TNNT2P45379 298 aaPredicted RBP19.62■□□□□ 0.73
CSNK1D-213ENST00000580446 CCDC93Q567U6 631 aa19.62■□□□□ 0.73
CSNK1D-213ENST00000580446 CARD14Q9BXL6 1004 aa19.62■□□□□ 0.73
CSNK1D-213ENST00000580446 CACNA1SQ13698 1873 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 NPHP1O15259 732 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 SRGNP10124 158 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 AEBP1Q8IUX7 1158 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 C7orf43Q8WVR3 580 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 POLKQ9UBT6 870 aa19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 ZNF330Q9Y3S2 320 aaPredicted RBP19.61■□□□□ 0.73
CSNK1D-213ENST00000580446 CELF2O95319 508 aaKnown RBP19.6■□□□□ 0.73
CSNK1D-213ENST00000580446 BRPF1P55201 1214 aaPredicted RBP19.6■□□□□ 0.73
CSNK1D-213ENST00000580446 FKBP4Q02790 459 aaKnown RBP eCLIP19.6■□□□□ 0.73
CSNK1D-213ENST00000580446 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 SOGA3Q5TF21 947 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 SAPCD2Q86UD0 394 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 CNBD1Q8NA66 436 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 ZNF408Q9H9D4 720 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 TBC1D2BQ9UPU7 963 aa19.59■□□□□ 0.73
CSNK1D-213ENST00000580446 FZD9O00144 591 aa19.58■□□□□ 0.72
CSNK1D-213ENST00000580446 HABP4Q5JVS0 413 aaKnown RBP19.58■□□□□ 0.72
CSNK1D-213ENST00000580446 GPC2Q8N158 579 aa19.58■□□□□ 0.72
CSNK1D-213ENST00000580446 MASTLQ96GX5 879 aa19.58■□□□□ 0.72
CSNK1D-213ENST00000580446 ANKRD26Q9UPS8 1709 aa19.58■□□□□ 0.72
CSNK1D-213ENST00000580446 IARSP41252 1262 aaKnown RBP19.57■□□□□ 0.72
CSNK1D-213ENST00000580446 COL4A5P29400 1685 aa19.56■□□□□ 0.72
CSNK1D-213ENST00000580446 LMOD1P29536 600 aaPredicted RBP19.56■□□□□ 0.72
CSNK1D-213ENST00000580446 SCNN1DP51172 638 aa19.56■□□□□ 0.72
CSNK1D-213ENST00000580446 PDZRN3Q9UPQ7 1066 aa19.56■□□□□ 0.72
CSNK1D-213ENST00000580446 SLC51AQ86UW1 340 aa19.55■□□□□ 0.72
CSNK1D-213ENST00000580446 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
CSNK1D-213ENST00000580446 GLIS2Q9BZE0 524 aaPredicted RBP19.55■□□□□ 0.72
CSNK1D-213ENST00000580446 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
CSNK1D-213ENST00000580446 ST5P78524 1137 aa19.53■□□□□ 0.72
CSNK1D-213ENST00000580446 DLK2Q6UY11 383 aa19.53■□□□□ 0.72
CSNK1D-213ENST00000580446 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
CSNK1D-213ENST00000580446 AMOTQ4VCS5 1084 aa19.52■□□□□ 0.72
CSNK1D-213ENST00000580446 NBPF15Q8N660 670 aa19.51■□□□□ 0.71
CSNK1D-213ENST00000580446 SLC52A2Q9HAB3 445 aa19.51■□□□□ 0.71
CSNK1D-213ENST00000580446 SETDB2Q96T68 719 aa19.5■□□□□ 0.71
CSNK1D-213ENST00000580446 HPS5Q9UPZ3 1129 aa19.5■□□□□ 0.71
CSNK1D-213ENST00000580446 EIF6P56537 245 aaKnown RBP19.49■□□□□ 0.71
CSNK1D-213ENST00000580446 JDP2Q8WYK2 163 aa19.49■□□□□ 0.71
CSNK1D-213ENST00000580446 TRPA1O75762 1119 aa19.48■□□□□ 0.71
CSNK1D-213ENST00000580446 GCC1Q96CN9 775 aa19.48■□□□□ 0.71
CSNK1D-213ENST00000580446 SCN7AQ01118 1682 aa19.48■□□□□ 0.71
CSNK1D-213ENST00000580446 A0A087WZG4 1122 aa19.47■□□□□ 0.71
CSNK1D-213ENST00000580446 NPR1P16066 1061 aa19.47■□□□□ 0.71
CSNK1D-213ENST00000580446 USP50Q70EL3 339 aaPredicted RBP19.47■□□□□ 0.71
CSNK1D-213ENST00000580446 RTKN2Q8IZC4 609 aa19.47■□□□□ 0.71
CSNK1D-213ENST00000580446 ARFGEF2Q9Y6D5 1785 aa19.47■□□□□ 0.71
CSNK1D-213ENST00000580446 TRPM7Q96QT4 1865 aa19.46■□□□□ 0.71
CSNK1D-213ENST00000580446 FAM177BA6PVY3 158 aa19.46■□□□□ 0.71
CSNK1D-213ENST00000580446 FXR1P51114 621 aaKnown RBP eCLIP19.46■□□□□ 0.71
CSNK1D-213ENST00000580446 NOGQ13253 232 aa19.46■□□□□ 0.71
CSNK1D-213ENST00000580446 CAMTA2O94983 1202 aa19.45■□□□□ 0.7
CSNK1D-213ENST00000580446 HUNKP57058 714 aa19.45■□□□□ 0.7
CSNK1D-213ENST00000580446 CTU1Q7Z7A3 348 aaKnown RBP19.45■□□□□ 0.7
CSNK1D-213ENST00000580446 NBPF5PQ86XG9 351 aaPredicted RBP19.45■□□□□ 0.7
CSNK1D-213ENST00000580446 RNF186Q9NXI6 227 aa19.45■□□□□ 0.7
CSNK1D-213ENST00000580446 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
CSNK1D-213ENST00000580446 SULT6B1Q6IMI4 303 aa19.44■□□□□ 0.7
CSNK1D-213ENST00000580446 HHIPL1Q96JK4 782 aa19.44■□□□□ 0.7
CSNK1D-213ENST00000580446 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
CSNK1D-213ENST00000580446 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
CSNK1D-213ENST00000580446 RNMTO43148 476 aaKnown RBP19.42■□□□□ 0.7
CSNK1D-213ENST00000580446 STARD3NLO95772 234 aa19.42■□□□□ 0.7
CSNK1D-213ENST00000580446 LARGE2Q8N3Y3 721 aa19.42■□□□□ 0.7
CSNK1D-213ENST00000580446 FAM155AB1AL88 458 aaPredicted RBP19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 DLL1O00548 723 aa19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 A1BGP04217 495 aa19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 ADARB2Q9NS39 739 aaKnown RBP19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 SCN11AQ9UI33 1791 aa19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 SNED1Q8TER0 1413 aa19.41■□□□□ 0.7
CSNK1D-213ENST00000580446 TCERG1O14776 1098 aaKnown RBP19.4■□□□□ 0.7
CSNK1D-213ENST00000580446 GPRC5DQ9NZD1 345 aa19.4■□□□□ 0.7
CSNK1D-213ENST00000580446 SHTN1A0MZ66 631 aa19.39■□□□□ 0.69
CSNK1D-213ENST00000580446 AKAP4Q5JQC9 854 aa19.39■□□□□ 0.69
CSNK1D-213ENST00000580446 VSIG10Q8N0Z9 540 aa19.39■□□□□ 0.69
CSNK1D-213ENST00000580446 SAGE1Q9NXZ1 904 aa19.39■□□□□ 0.69
CSNK1D-213ENST00000580446 MRC1P22897 1456 aa19.39■□□□□ 0.69
CSNK1D-213ENST00000580446 HIRAP54198 1017 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-213ENST00000580446 USP48Q86UV5 1035 aa19.38■□□□□ 0.69
CSNK1D-213ENST00000580446 TRPM4Q8TD43 1214 aa19.38■□□□□ 0.69
CSNK1D-213ENST00000580446 ZNF496Q96IT1 587 aaPredicted RBP19.38■□□□□ 0.69
CSNK1D-213ENST00000580446 PSMD1Q99460 953 aa19.38■□□□□ 0.69
CSNK1D-213ENST00000580446 GMPSP49915 693 aaPredicted RBP19.37■□□□□ 0.69
CSNK1D-213ENST00000580446 RGMBQ6NW40 437 aa19.37■□□□□ 0.69
CSNK1D-213ENST00000580446 DZIP3Q86Y13 1208 aaKnown RBP19.37■□□□□ 0.69
CSNK1D-213ENST00000580446 KLRG2A4D1S0 409 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms