RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 OLFM4Q6UX06 510 aa26.16■■□□□ 1.78
LIMD2-209ENST00000580222 CAMTA2O94983 1202 aa26.15■■□□□ 1.78
LIMD2-209ENST00000580222 RASSF10A6NK89 507 aa26.14■■□□□ 1.78
LIMD2-209ENST00000580222 A1BGP04217 495 aa26.14■■□□□ 1.78
LIMD2-209ENST00000580222 MAP1SQ66K74 1059 aaPredicted RBP26.14■■□□□ 1.78
LIMD2-209ENST00000580222 CNBD1Q8NA66 436 aa26.14■■□□□ 1.78
LIMD2-209ENST00000580222 DEFB115Q30KQ5 88 aa26.13■■□□□ 1.77
LIMD2-209ENST00000580222 MASTLQ96GX5 879 aa26.13■■□□□ 1.77
LIMD2-209ENST00000580222 SETDB2Q96T68 719 aa26.13■■□□□ 1.77
LIMD2-209ENST00000580222 ZNF277Q9NRM2 450 aaPredicted RBP26.13■■□□□ 1.77
LIMD2-209ENST00000580222 CLEC11AQ9Y240 323 aa26.13■■□□□ 1.77
LIMD2-209ENST00000580222 EPHX2P34913 555 aa26.11■■□□□ 1.77
LIMD2-209ENST00000580222 CNTROBQ8N137 903 aa26.11■■□□□ 1.77
LIMD2-209ENST00000580222 HACL1Q9UJ83 578 aa26.11■■□□□ 1.77
LIMD2-209ENST00000580222 WDR33Q9C0J8 1336 aaKnown RBP26.11■■□□□ 1.77
LIMD2-209ENST00000580222 HEG1Q9ULI3 1381 aa26.1■■□□□ 1.77
LIMD2-209ENST00000580222 ZNF316A6NFI3 1004 aaPredicted RBP26.1■■□□□ 1.77
LIMD2-209ENST00000580222 IL6STP40189 918 aaPredicted RBP26.1■■□□□ 1.77
LIMD2-209ENST00000580222 FMR1Q06787 632 aaKnown RBP eCLIP26.1■■□□□ 1.77
LIMD2-209ENST00000580222 TTC5Q8N0Z6 440 aa26.1■■□□□ 1.77
LIMD2-209ENST00000580222 VIRMAQ69YN4 1812 aaKnown RBP26.09■■□□□ 1.77
LIMD2-209ENST00000580222 SOGA3Q5TF21 947 aa26.09■■□□□ 1.77
LIMD2-209ENST00000580222 IL17REQ8NFR9 667 aa26.09■■□□□ 1.77
LIMD2-209ENST00000580222 UBR2Q8IWV8 1755 aa26.08■■□□□ 1.77
LIMD2-209ENST00000580222 CCDC93Q567U6 631 aa26.08■■□□□ 1.77
LIMD2-209ENST00000580222 ZNF790Q6PG37 636 aa26.08■■□□□ 1.77
LIMD2-209ENST00000580222 SCN7AQ01118 1682 aa26.08■■□□□ 1.77
LIMD2-209ENST00000580222 RNF123Q5XPI4 1314 aa26.08■■□□□ 1.77
LIMD2-209ENST00000580222 PIP4K2AP48426 406 aaPredicted RBP26.07■■□□□ 1.76
LIMD2-209ENST00000580222 ST5P78524 1137 aa26.07■■□□□ 1.76
LIMD2-209ENST00000580222 FKBP4Q02790 459 aaKnown RBP eCLIP26.07■■□□□ 1.76
LIMD2-209ENST00000580222 ADAMTSL1Q8N6G6 1762 aa26.07■■□□□ 1.76
LIMD2-209ENST00000580222 NPHP1O15259 732 aa26.06■■□□□ 1.76
LIMD2-209ENST00000580222 KCNQ3O43525 872 aa26.06■■□□□ 1.76
LIMD2-209ENST00000580222 CCDC85CA6NKD9 419 aa26.05■■□□□ 1.76
LIMD2-209ENST00000580222 SCN4AP35499 1836 aa26.04■■□□□ 1.76
LIMD2-209ENST00000580222 MAP2K1Q02750 393 aaPredicted RBP26.04■■□□□ 1.76
LIMD2-209ENST00000580222 AMER1Q5JTC6 1135 aaPredicted RBP26.04■■□□□ 1.76
LIMD2-209ENST00000580222 TEX13AQ9BXU3 409 aaPredicted RBP26.04■■□□□ 1.76
LIMD2-209ENST00000580222 ABT1Q9ULW3 272 aaKnown RBP26.04■■□□□ 1.76
LIMD2-209ENST00000580222 KLRG2A4D1S0 409 aaPredicted RBP26.03■■□□□ 1.76
LIMD2-209ENST00000580222 FZD9O00144 591 aa26.03■■□□□ 1.76
LIMD2-209ENST00000580222 RGS19P49795 217 aa26.03■■□□□ 1.76
LIMD2-209ENST00000580222 DZIP3Q86Y13 1208 aaKnown RBP26.03■■□□□ 1.76
LIMD2-209ENST00000580222 NPR1P16066 1061 aa26.02■■□□□ 1.76
LIMD2-209ENST00000580222 MLLT1Q03111 559 aaPredicted RBP26.02■■□□□ 1.76
LIMD2-209ENST00000580222 DDX21Q9NR30 783 aaKnown RBP eCLIP26.02■■□□□ 1.76
LIMD2-209ENST00000580222 PNMA8AQ86V59 439 aaPredicted RBP26.01■■□□□ 1.75
LIMD2-209ENST00000580222 NBPF5PQ86XG9 351 aaPredicted RBP26.01■■□□□ 1.75
LIMD2-209ENST00000580222 SYNE4Q8N205 404 aa26.01■■□□□ 1.75
LIMD2-209ENST00000580222 KNSTRNQ9Y448 316 aa26.01■■□□□ 1.75
LIMD2-209ENST00000580222 USP16Q9Y5T5 823 aa26.01■■□□□ 1.75
LIMD2-209ENST00000580222 PRAMEF22A3QJZ6 481 aa26■■□□□ 1.75
LIMD2-209ENST00000580222 TSKSQ9UJT2 592 aa26■■□□□ 1.75
LIMD2-209ENST00000580222 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
LIMD2-209ENST00000580222 TEFQ10587 303 aa25.99■■□□□ 1.75
LIMD2-209ENST00000580222 CYP4F22Q6NT55 531 aa25.99■■□□□ 1.75
LIMD2-209ENST00000580222 CAPNS2Q96L46 248 aa25.99■■□□□ 1.75
LIMD2-209ENST00000580222 CACNA1SQ13698 1873 aa25.99■■□□□ 1.75
LIMD2-209ENST00000580222 FMNL2Q96PY5 1086 aa25.98■■□□□ 1.75
LIMD2-209ENST00000580222 DIAPH1O60610 1272 aaKnown RBP25.97■■□□□ 1.75
LIMD2-209ENST00000580222 CST9Q5W186 159 aa25.97■■□□□ 1.75
LIMD2-209ENST00000580222 RTKN2Q8IZC4 609 aa25.97■■□□□ 1.75
LIMD2-209ENST00000580222 GPC2Q8N158 579 aa25.97■■□□□ 1.75
LIMD2-209ENST00000580222 ARFGEF2Q9Y6D5 1785 aa25.97■■□□□ 1.75
LIMD2-209ENST00000580222 GRM1Q13255 1194 aa25.96■■□□□ 1.75
LIMD2-209ENST00000580222 SLC51AQ86UW1 340 aa25.96■■□□□ 1.75
LIMD2-209ENST00000580222 GPR101Q96P66 508 aaPredicted RBP25.96■■□□□ 1.75
LIMD2-209ENST00000580222 COL4A5P29400 1685 aa25.96■■□□□ 1.75
LIMD2-209ENST00000580222 FAM177BA6PVY3 158 aa25.95■■□□□ 1.74
LIMD2-209ENST00000580222 GNAT3A8MTJ3 354 aa25.95■■□□□ 1.74
LIMD2-209ENST00000580222 TRAF5O00463 557 aa25.95■■□□□ 1.74
LIMD2-209ENST00000580222 SNED1Q8TER0 1413 aa25.95■■□□□ 1.74
LIMD2-209ENST00000580222 AOC2O75106 756 aa25.94■■□□□ 1.74
LIMD2-209ENST00000580222 EPS15P42566 896 aa25.94■■□□□ 1.74
LIMD2-209ENST00000580222 CLEC4GQ6UXB4 293 aa25.94■■□□□ 1.74
LIMD2-209ENST00000580222 NPM2Q86SE8 214 aaKnown RBP25.94■■□□□ 1.74
LIMD2-209ENST00000580222 GJA3Q9Y6H8 435 aa25.94■■□□□ 1.74
LIMD2-209ENST00000580222 PAXIP1Q6ZW49 1069 aaPredicted RBP25.93■■□□□ 1.74
LIMD2-209ENST00000580222 TNRC18O15417 2968 aaPredicted RBP25.92■■□□□ 1.74
LIMD2-209ENST00000580222 LTBP1Q14766 1721 aa25.92■■□□□ 1.74
LIMD2-209ENST00000580222 SCNN1DP51172 638 aa25.92■■□□□ 1.74
LIMD2-209ENST00000580222 DDX10Q13206 875 aaKnown RBP25.92■■□□□ 1.74
LIMD2-209ENST00000580222 NBPF26B4DH59 902 aa25.91■■□□□ 1.74
LIMD2-209ENST00000580222 NBPF10Q6P3W6 841 aaKnown RBP25.91■■□□□ 1.74
LIMD2-209ENST00000580222 TPTE2Q6XPS3 522 aa25.91■■□□□ 1.74
LIMD2-209ENST00000580222 NBPF15Q8N660 670 aa25.91■■□□□ 1.74
LIMD2-209ENST00000580222 NIP7Q9Y221 180 aaKnown RBP eCLIP25.91■■□□□ 1.74
LIMD2-209ENST00000580222 PCDH10Q9P2E7 1040 aa25.9■■□□□ 1.74
LIMD2-209ENST00000580222 CEMIPQ8WUJ3 1361 aa25.9■■□□□ 1.74
LIMD2-209ENST00000580222 BCORQ6W2J9 1755 aa25.9■■□□□ 1.74
LIMD2-209ENST00000580222 THSD7BQ9C0I4 1608 aa25.89■■□□□ 1.74
LIMD2-209ENST00000580222 BTBD11A6QL63 1104 aa25.89■■□□□ 1.74
LIMD2-209ENST00000580222 HLFQ16534 295 aa25.89■■□□□ 1.74
LIMD2-209ENST00000580222 PSMD1Q99460 953 aa25.89■■□□□ 1.74
LIMD2-209ENST00000580222 ECE1P42892 770 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 GAS2L2Q8NHY3 880 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 JDP2Q8WYK2 163 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 PHACTR3Q96KR7 559 aa25.88■■□□□ 1.73
LIMD2-209ENST00000580222 BEGAINQ9BUH8 593 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms