RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 THRAP3Q9Y2W1 955 aaKnown RBP9.48□□□□□ -0.89
RNF43-204ENST00000580014 SPATA31A1Q5TZJ5 1347 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 NRAPQ86VF7 1730 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 ATRNO75882 1429 aa9.48□□□□□ -0.89
RNF43-204ENST00000580014 A6NJR5 290 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 U2SURPO15042 1029 aaKnown RBP9.47□□□□□ -0.89
RNF43-204ENST00000580014 PPP2R2DQ66LE6 453 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 SULT6B1Q6IMI4 303 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 HOMEZQ8IX15 550 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 PNNQ9H307 717 aaKnown RBP9.47□□□□□ -0.89
RNF43-204ENST00000580014 NLRP2Q9NX02 1062 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 RABGEF1Q9UJ41 708 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 USP21Q9UK80 565 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 PLCH1Q4KWH8 1693 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 FAM208AQ9UK61 1670 aaKnown RBP9.47□□□□□ -0.89
RNF43-204ENST00000580014 AFF2P51816 1311 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 DISP2A7MBM2 1401 aa9.47□□□□□ -0.89
RNF43-204ENST00000580014 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.46□□□□□ -0.89
RNF43-204ENST00000580014 CSB-PGBD3P0DP91 1061 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 GJA5P36382 358 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 PBX2P40425 430 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 RFC5P40937 340 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 MEX3CQ5U5Q3 659 aaKnown RBP9.46□□□□□ -0.9
RNF43-204ENST00000580014 LHX8Q68G74 356 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 RSBN1LQ6PCB5 846 aaPredicted RBP9.46□□□□□ -0.9
RNF43-204ENST00000580014 TOM1L2Q6ZVM7 507 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 NGEFQ8N5V2 710 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 RDH13Q8NBN7 331 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 BANK1Q8NDB2 785 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 RUNDC1Q96C34 613 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
RNF43-204ENST00000580014 HMOX1P09601 288 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 FAM9BQ8IZU0 186 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 TCP11L2Q8N4U5 519 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 PHACTR3Q96KR7 559 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
RNF43-204ENST00000580014 TRPC5Q9UL62 973 aaPredicted RBP9.45□□□□□ -0.9
RNF43-204ENST00000580014 OVOS2A0A0G2JMS6 1433 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 RGPD5Q99666 1765 aa9.45□□□□□ -0.9
RNF43-204ENST00000580014 MOXD2PA6NHM9 499 aa9.44□□□□□ -0.9
RNF43-204ENST00000580014 IL2RBP14784 551 aa9.44□□□□□ -0.9
RNF43-204ENST00000580014 AMOTQ4VCS5 1084 aa9.44□□□□□ -0.9
RNF43-204ENST00000580014 ZNF772Q68DY9 489 aaPredicted RBP9.44□□□□□ -0.9
RNF43-204ENST00000580014 USHBP1Q8N6Y0 703 aa9.44□□□□□ -0.9
RNF43-204ENST00000580014 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
RNF43-204ENST00000580014 GJD4Q96KN9 370 aaPredicted RBP9.44□□□□□ -0.9
RNF43-204ENST00000580014 RGS17Q9UGC6 210 aaPredicted RBP9.44□□□□□ -0.9
RNF43-204ENST00000580014 MEGF6O75095 1541 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 SPDYE5A6NIY4 337 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 ST18O60284 1047 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 KDM4AO75164 1064 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
RNF43-204ENST00000580014 CCDC27Q2M243 656 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 TMEM259Q4ZIN3 620 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 SWT1Q5T5J6 900 aaKnown RBP9.43□□□□□ -0.9
RNF43-204ENST00000580014 DMRTA1Q5VZB9 504 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 RAPGEF4Q8WZA2 1011 aa9.43□□□□□ -0.9
RNF43-204ENST00000580014 QTRT2Q9H974 415 aaKnown RBP9.43□□□□□ -0.9
RNF43-204ENST00000580014 TMPOP42166 694 aaKnown RBP9.42□□□□□ -0.9
RNF43-204ENST00000580014 GCGRP47871 477 aa9.42□□□□□ -0.9
RNF43-204ENST00000580014 EMP3P54852 163 aa9.42□□□□□ -0.9
RNF43-204ENST00000580014 USP46P62068 366 aa9.42□□□□□ -0.9
RNF43-204ENST00000580014 NFE2L2Q16236 605 aa9.42□□□□□ -0.9
RNF43-204ENST00000580014 PLEKHO1Q53GL0 409 aaPredicted RBP9.42□□□□□ -0.9
RNF43-204ENST00000580014 SEPT9Q9UHD8 586 aaPredicted RBP9.42□□□□□ -0.9
RNF43-204ENST00000580014 ZNF521Q96K83 1311 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 APAF1O14727 1248 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 HTATSF1O43719 755 aaKnown RBP9.41□□□□□ -0.9
RNF43-204ENST00000580014 NDUFV2P19404 249 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 FAM98CQ17RN3 349 aaKnown RBP9.41□□□□□ -0.9
RNF43-204ENST00000580014 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
RNF43-204ENST00000580014 CCDC146Q8IYE0 955 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 ZNF687Q8N1G0 1237 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 GLI3P10071 1580 aa9.41□□□□□ -0.9
RNF43-204ENST00000580014 RGPD2P0DJD1 1756 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 CYP27B1O15528 508 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 TRAK2O60296 914 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 LILRB3O75022 631 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 SLC10A3P09131 477 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 RBM6P78332 1123 aaKnown RBP9.4□□□□□ -0.9
RNF43-204ENST00000580014 ZCRB1Q8TBF4 217 aaKnown RBP9.4□□□□□ -0.9
RNF43-204ENST00000580014 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 VPS9D1Q9Y2B5 631 aa9.4□□□□□ -0.9
RNF43-204ENST00000580014 MAPK8IP3Q9UPT6 1336 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 NEFMP07197 916 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 CSPP1Q1MSJ5 1256 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 AKAP4Q5JQC9 854 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 C1orf115Q9H7X2 142 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 PKD1L3Q7Z443 1732 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 TNS2Q63HR2 1409 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 THSD7AQ9UPZ6 1657 aa9.39□□□□□ -0.91
RNF43-204ENST00000580014 CEMIPQ8WUJ3 1361 aa9.38□□□□□ -0.91
RNF43-204ENST00000580014 EXOC5O00471 708 aa9.38□□□□□ -0.91
RNF43-204ENST00000580014 HOXA2O43364 376 aa9.38□□□□□ -0.91
RNF43-204ENST00000580014 RAD21O60216 631 aa9.38□□□□□ -0.91
RNF43-204ENST00000580014 PHKG2P15735 406 aa9.38□□□□□ -0.91
RNF43-204ENST00000580014 SLC4A3P48751 1232 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms