RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
GGA3-208ENST00000579743 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
GGA3-208ENST00000579743 C21orf2O43822 256 aa18.05■□□□□ 0.48
GGA3-208ENST00000579743 FSTL1Q12841 308 aa18.05■□□□□ 0.48
GGA3-208ENST00000579743 KIF6Q6ZMV9 814 aa18.05■□□□□ 0.48
GGA3-208ENST00000579743 CCDC24Q8N4L8 307 aa18.05■□□□□ 0.48
GGA3-208ENST00000579743 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
GGA3-208ENST00000579743 ZNF219Q9P2Y4 722 aaPredicted RBP18.04■□□□□ 0.48
GGA3-208ENST00000579743 SBF1O95248 1867 aa18.03■□□□□ 0.48
GGA3-208ENST00000579743 GLTPD2A6NH11 291 aa18.03■□□□□ 0.48
GGA3-208ENST00000579743 SRGNP10124 158 aa18.03■□□□□ 0.48
GGA3-208ENST00000579743 VEGFAP15692 232 aaPredicted RBP18.03■□□□□ 0.48
GGA3-208ENST00000579743 NYXQ9GZU5 481 aa18.03■□□□□ 0.48
GGA3-208ENST00000579743 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 NBPF26B4DH59 902 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 NPR1P16066 1061 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 RIPK4P57078 832 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 EIF4A1P60842 406 aaKnown RBP18.02■□□□□ 0.48
GGA3-208ENST00000579743 ERFEQ4G0M1 354 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 NBPF10Q6P3W6 841 aaKnown RBP18.02■□□□□ 0.48
GGA3-208ENST00000579743 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 NBPF15Q8N660 670 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 TAOK3Q9H2K8 898 aa18.02■□□□□ 0.48
GGA3-208ENST00000579743 RRP7AQ9Y3A4 280 aaKnown RBP18.02■□□□□ 0.48
GGA3-208ENST00000579743 ERVV-1B6SEH8 477 aa18.01■□□□□ 0.47
GGA3-208ENST00000579743 NFKBIEO00221 500 aa18.01■□□□□ 0.47
GGA3-208ENST00000579743 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
GGA3-208ENST00000579743 PRPF40BQ6NWY9 871 aaKnown RBP18.01■□□□□ 0.47
GGA3-208ENST00000579743 SMC1BQ8NDV3 1235 aa18.01■□□□□ 0.47
GGA3-208ENST00000579743 BABAM1Q9NWV8 329 aa18.01■□□□□ 0.47
GGA3-208ENST00000579743 TSPYL4Q9UJ04 414 aa18.01■□□□□ 0.47
GGA3-208ENST00000579743 ERBB4Q15303 1308 aa18■□□□□ 0.47
GGA3-208ENST00000579743 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
GGA3-208ENST00000579743 LTBP3Q9NS15 1303 aa18■□□□□ 0.47
GGA3-208ENST00000579743 TNRC6CQ9HCJ0 1690 aaKnown RBP18■□□□□ 0.47
GGA3-208ENST00000579743 FAM177BA6PVY3 158 aa18■□□□□ 0.47
GGA3-208ENST00000579743 ALDH1B1P30837 517 aa18■□□□□ 0.47
GGA3-208ENST00000579743 WDR43Q15061 677 aaKnown RBP eCLIP18■□□□□ 0.47
GGA3-208ENST00000579743 DLG5Q8TDM6 1919 aa18■□□□□ 0.47
GGA3-208ENST00000579743 ANKRD31Q8N7Z5 1873 aa17.99■□□□□ 0.47
GGA3-208ENST00000579743 MYL6BP14649 208 aa17.99■□□□□ 0.47
GGA3-208ENST00000579743 THUMPD2Q9BTF0 503 aaKnown RBP17.99■□□□□ 0.47
GGA3-208ENST00000579743 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
GGA3-208ENST00000579743 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
GGA3-208ENST00000579743 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
GGA3-208ENST00000579743 RTKN2Q8IZC4 609 aa17.97■□□□□ 0.47
GGA3-208ENST00000579743 KLRG2A4D1S0 409 aaPredicted RBP17.96■□□□□ 0.47
GGA3-208ENST00000579743 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
GGA3-208ENST00000579743 HLFQ16534 295 aa17.96■□□□□ 0.47
GGA3-208ENST00000579743 KDM3BQ7LBC6 1761 aa17.96■□□□□ 0.47
GGA3-208ENST00000579743 CCDC88AQ3V6T2 1871 aa17.95■□□□□ 0.46
GGA3-208ENST00000579743 EIF2S2P20042 333 aaKnown RBP17.94■□□□□ 0.46
GGA3-208ENST00000579743 PPP1R42Q7Z4L9 355 aa17.94■□□□□ 0.46
GGA3-208ENST00000579743 RPGRQ92834 1020 aaKnown RBP17.94■□□□□ 0.46
GGA3-208ENST00000579743 TMX4Q9H1E5 349 aaPredicted RBP17.94■□□□□ 0.46
GGA3-208ENST00000579743 ZBTB3Q9H5J0 574 aa17.94■□□□□ 0.46
GGA3-208ENST00000579743 COL11A2P13942 1736 aaPredicted RBP17.94■□□□□ 0.46
GGA3-208ENST00000579743 TIAM2Q8IVF5 1701 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 PRELPP51888 382 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 NEUROD2Q15784 382 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 GRIPAP1Q4V328 841 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 PARP10Q53GL7 1025 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
GGA3-208ENST00000579743 FER1L6Q2WGJ9 1857 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 IQCA1LA6NCM1 817 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 GPTP24298 496 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 FKBP4Q02790 459 aaKnown RBP eCLIP17.92■□□□□ 0.46
GGA3-208ENST00000579743 CC2D2BQ6DHV5 1058 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
GGA3-208ENST00000579743 TTLL7Q6ZT98 887 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 SLX4Q8IY92 1834 aa17.92■□□□□ 0.46
GGA3-208ENST00000579743 IBTKQ9P2D0 1353 aaPredicted RBP17.91■□□□□ 0.46
GGA3-208ENST00000579743 HSP90AB3PQ58FF7 597 aa17.91■□□□□ 0.46
GGA3-208ENST00000579743 C7orf43Q8WVR3 580 aa17.91■□□□□ 0.46
GGA3-208ENST00000579743 RBM17Q96I25 401 aaKnown RBP17.91■□□□□ 0.46
GGA3-208ENST00000579743 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
GGA3-208ENST00000579743 ARFGEF2Q9Y6D5 1785 aa17.91■□□□□ 0.46
GGA3-208ENST00000579743 NUTM1Q86Y26 1132 aa17.9■□□□□ 0.46
GGA3-208ENST00000579743 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
GGA3-208ENST00000579743 DICER1Q9UPY3 1922 aaKnown RBP17.9■□□□□ 0.46
GGA3-208ENST00000579743 CRY2Q49AN0 593 aa17.89■□□□□ 0.45
GGA3-208ENST00000579743 CCDC146Q8IYE0 955 aa17.89■□□□□ 0.45
GGA3-208ENST00000579743 ZNF34Q8IZ26 560 aa17.89■□□□□ 0.45
GGA3-208ENST00000579743 JDP2Q8WYK2 163 aa17.89■□□□□ 0.45
GGA3-208ENST00000579743 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
GGA3-208ENST00000579743 SUSD4Q5VX71 490 aa17.88■□□□□ 0.45
GGA3-208ENST00000579743 DNAJC5GQ8N7S2 189 aa17.88■□□□□ 0.45
GGA3-208ENST00000579743 KLRG1Q96E93 195 aa17.88■□□□□ 0.45
GGA3-208ENST00000579743 UTP14AQ9BVJ6 771 aaKnown RBP17.88■□□□□ 0.45
GGA3-208ENST00000579743 RNF123Q5XPI4 1314 aa17.88■□□□□ 0.45
GGA3-208ENST00000579743 NUP98P52948 1817 aa17.88■□□□□ 0.45
GGA3-208ENST00000579743 WDR90Q96KV7 1748 aa17.87■□□□□ 0.45
GGA3-208ENST00000579743 DDNO94850 711 aaPredicted RBP17.87■□□□□ 0.45
GGA3-208ENST00000579743 ZNF277Q9NRM2 450 aaPredicted RBP17.87■□□□□ 0.45
GGA3-208ENST00000579743 RIC1Q4ADV7 1423 aa17.87■□□□□ 0.45
GGA3-208ENST00000579743 CHL1O00533 1208 aa17.86■□□□□ 0.45
GGA3-208ENST00000579743 HOXA10P31260 410 aaPredicted RBP17.86■□□□□ 0.45
GGA3-208ENST00000579743 IARSP41252 1262 aaKnown RBP17.86■□□□□ 0.45
GGA3-208ENST00000579743 CALD1Q05682 793 aaKnown RBP17.86■□□□□ 0.45
GGA3-208ENST00000579743 AIMP1Q12904 312 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms