RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 NOM1Q5C9Z4 860 aaKnown RBP17.71■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC112Q8NEF3 446 aa17.71■□□□□ 0.42
ITGB4-206ENST00000579662 CHRNA2Q15822 529 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC181Q5TID7 509 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 IQCEQ6IPM2 695 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 MRPL50Q8N5N7 158 aaKnown RBP17.7■□□□□ 0.42
ITGB4-206ENST00000579662 ATP5J2-PTCD1G3V325 749 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC152Q4G0S7 254 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 RHPN1Q8TCX5 695 aa17.7■□□□□ 0.42
ITGB4-206ENST00000579662 SOS1Q07889 1333 aaPredicted RBP17.7■□□□□ 0.42
ITGB4-206ENST00000579662 CHPF2Q9P2E5 772 aa17.69■□□□□ 0.42
ITGB4-206ENST00000579662 PPP1R12BO60237 982 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-206ENST00000579662 POLKQ9UBT6 870 aa17.69■□□□□ 0.42
ITGB4-206ENST00000579662 SYCE3A1L190 88 aa17.69■□□□□ 0.42
ITGB4-206ENST00000579662 BAG3O95817 575 aa17.69■□□□□ 0.42
ITGB4-206ENST00000579662 ZFYP08048 801 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
ITGB4-206ENST00000579662 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
ITGB4-206ENST00000579662 TMEM266Q2M3C6 531 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 EHMT1Q9H9B1 1298 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 ANKRD44Q8N8A2 993 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 ZNF397Q8NF99 534 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-206ENST00000579662 SMARCC1Q92922 1105 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-206ENST00000579662 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 KIF5BP33176 963 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 EIF5P55010 431 aaKnown RBP17.68■□□□□ 0.42
ITGB4-206ENST00000579662 CUL5Q93034 780 aa17.68■□□□□ 0.42
ITGB4-206ENST00000579662 BRPF3Q9ULD4 1205 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 ERLIN1O75477 346 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 IGHDP01880 384 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 GSTO1P78417 241 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 PDE4BQ07343 736 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 TESK2Q96S53 571 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 YTHDC2Q9H6S0 1430 aaKnown RBP17.67■□□□□ 0.42
ITGB4-206ENST00000579662 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 NCOA7Q8NI08 942 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 NEK1Q96PY6 1258 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 TSG101Q99816 390 aa17.67■□□□□ 0.42
ITGB4-206ENST00000579662 DDX19AQ9NUU7 478 aaKnown RBP17.66■□□□□ 0.42
ITGB4-206ENST00000579662 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC194A0A1B0GVG4 234 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 ST5P78524 1137 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 CCDC96Q2M329 555 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 CWC15Q9P013 229 aaKnown RBP17.66■□□□□ 0.42
ITGB4-206ENST00000579662 EPB41L2O43491 1005 aaKnown RBP17.66■□□□□ 0.42
ITGB4-206ENST00000579662 CFAP100Q494V2 611 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 RFC4P35249 363 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 TBC1D32Q96NH3 1257 aa17.66■□□□□ 0.42
ITGB4-206ENST00000579662 KIF2AO00139 706 aaPredicted RBP17.65■□□□□ 0.42
ITGB4-206ENST00000579662 CAMK4Q16566 473 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 PYM1Q9BRP8 204 aaKnown RBP17.65■□□□□ 0.42
ITGB4-206ENST00000579662 C19orf44Q9H6X5 657 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 KIF20AO95235 890 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 ZMYM3Q14202 1370 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 GRM8O00222 908 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 FGFR1OPO95684 399 aaKnown RBP17.65■□□□□ 0.42
ITGB4-206ENST00000579662 NLRP5P59047 1200 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 MFSD6Q6ZSS7 791 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 C6orf229H3BNL8 230 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 MEIS3Q99687 375 aa17.65■□□□□ 0.42
ITGB4-206ENST00000579662 DESP17661 470 aa17.64■□□□□ 0.42
ITGB4-206ENST00000579662 GJB2P29033 226 aa17.64■□□□□ 0.42
ITGB4-206ENST00000579662 TMEM67Q5HYA8 995 aa17.64■□□□□ 0.42
ITGB4-206ENST00000579662 A0A1W2PP64 1363 aa17.64■□□□□ 0.42
ITGB4-206ENST00000579662 TOM1O60784 492 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 FILIP1Q7Z7B0 1213 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 COL17A1Q9UMD9 1497 aaPredicted RBP17.64■□□□□ 0.41
ITGB4-206ENST00000579662 ATP7AQ04656 1500 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 DISP1Q96F81 1524 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 IARSP41252 1262 aaKnown RBP17.64■□□□□ 0.41
ITGB4-206ENST00000579662 MTHFSDQ2M296 383 aaKnown RBP17.64■□□□□ 0.41
ITGB4-206ENST00000579662 CCDC178Q5BJE1 867 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 GOLGA6L10A6NI86 522 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 FBLN1P23142 703 aa17.64■□□□□ 0.41
ITGB4-206ENST00000579662 IL15P40933 162 aaPredicted RBP17.64■□□□□ 0.41
ITGB4-206ENST00000579662 CRNKL1Q9BZJ0 848 aaKnown RBP17.64■□□□□ 0.41
ITGB4-206ENST00000579662 PZPP20742 1482 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 STX6O43752 255 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 SSFA2P28290 1259 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 FKBP15Q5T1M5 1219 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 COPS6Q7L5N1 327 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 C8orf58Q8NAV2 365 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 TNPO1Q92973 898 aaKnown RBP17.63■□□□□ 0.41
ITGB4-206ENST00000579662 BCL11BQ9C0K0 894 aaPredicted RBP17.63■□□□□ 0.41
ITGB4-206ENST00000579662 NBPF6Q5VWK0 638 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 NBPF5PQ86XG9 351 aaPredicted RBP17.63■□□□□ 0.41
ITGB4-206ENST00000579662 NBPF4Q96M43 638 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 USP16Q9Y5T5 823 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 ANAPC15P60006 121 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 ZGPATQ8N5A5 531 aaKnown RBP17.63■□□□□ 0.41
ITGB4-206ENST00000579662 TBX22Q9Y458 520 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 IL2RBP14784 551 aa17.63■□□□□ 0.41
ITGB4-206ENST00000579662 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
ITGB4-206ENST00000579662 ABCA5Q8WWZ7 1642 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 HLA-DOAP06340 250 aa17.62■□□□□ 0.41
ITGB4-206ENST00000579662 MATR3P43243 847 aaKnown RBP eCLIP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms