RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 SRGNP10124 158 aa18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 EIF5P55010 431 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 MASTLQ96GX5 879 aa18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 MCOLN1Q9GZU1 580 aa18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
CDK5RAP3-213ENST00000579605 ECE1P42892 770 aa18.09■□□□□ 0.49
CDK5RAP3-213ENST00000579605 CCDC93Q567U6 631 aa18.09■□□□□ 0.49
CDK5RAP3-213ENST00000579605 CNBD1Q8NA66 436 aa18.09■□□□□ 0.49
CDK5RAP3-213ENST00000579605 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
CDK5RAP3-213ENST00000579605 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.49
CDK5RAP3-213ENST00000579605 RNMTO43148 476 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 AOC2O75106 756 aa18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 STARD3NLO95772 234 aa18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 ST5P78524 1137 aa18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 OLFM4Q6UX06 510 aa18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 DICER1Q9UPY3 1922 aaKnown RBP18.08■□□□□ 0.48
CDK5RAP3-213ENST00000579605 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
CDK5RAP3-213ENST00000579605 VSIG10Q8N0Z9 540 aa18.06■□□□□ 0.48
CDK5RAP3-213ENST00000579605 C7orf43Q8WVR3 580 aa18.06■□□□□ 0.48
CDK5RAP3-213ENST00000579605 GJA3Q9Y6H8 435 aa18.06■□□□□ 0.48
CDK5RAP3-213ENST00000579605 DGKZQ13574 1117 aa18.05■□□□□ 0.48
CDK5RAP3-213ENST00000579605 SLX4Q8IY92 1834 aa18.05■□□□□ 0.48
CDK5RAP3-213ENST00000579605 ANKRD31Q8N7Z5 1873 aa18.04■□□□□ 0.48
CDK5RAP3-213ENST00000579605 TRAF5O00463 557 aa18.04■□□□□ 0.48
CDK5RAP3-213ENST00000579605 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP3-213ENST00000579605 SCN4AP35499 1836 aa18.04■□□□□ 0.48
CDK5RAP3-213ENST00000579605 COL11A2P13942 1736 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-213ENST00000579605 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
CDK5RAP3-213ENST00000579605 SYNE4Q8N205 404 aa18.03■□□□□ 0.48
CDK5RAP3-213ENST00000579605 FZD9O00144 591 aa18.02■□□□□ 0.48
CDK5RAP3-213ENST00000579605 IARSP41252 1262 aaKnown RBP18.02■□□□□ 0.48
CDK5RAP3-213ENST00000579605 CST9Q5W186 159 aa18.02■□□□□ 0.48
CDK5RAP3-213ENST00000579605 GPC2Q8N158 579 aa18.02■□□□□ 0.48
CDK5RAP3-213ENST00000579605 NPR1P16066 1061 aa18.01■□□□□ 0.47
CDK5RAP3-213ENST00000579605 LMOD1P29536 600 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-213ENST00000579605 NBPF5PQ86XG9 351 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-213ENST00000579605 RTKN2Q8IZC4 609 aa18.01■□□□□ 0.47
CDK5RAP3-213ENST00000579605 CAMTA2O94983 1202 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 A1BGP04217 495 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 HMOX1P09601 288 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 IL13P35225 146 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 MAP2K2P36507 400 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 MORC1Q86VD1 984 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 JDP2Q8WYK2 163 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 TLL2Q9Y6L7 1015 aa18■□□□□ 0.47
CDK5RAP3-213ENST00000579605 IL6STP40189 918 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-213ENST00000579605 EPS15P42566 896 aa17.99■□□□□ 0.47
CDK5RAP3-213ENST00000579605 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-213ENST00000579605 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-213ENST00000579605 ADAMTSL1Q8N6G6 1762 aa17.99■□□□□ 0.47
CDK5RAP3-213ENST00000579605 FAM177BA6PVY3 158 aa17.98■□□□□ 0.47
CDK5RAP3-213ENST00000579605 SOX10P56693 466 aa17.98■□□□□ 0.47
CDK5RAP3-213ENST00000579605 MTHFSDQ2M296 383 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-213ENST00000579605 SCN11AQ9UI33 1791 aa17.98■□□□□ 0.47
CDK5RAP3-213ENST00000579605 CA12O43570 354 aa17.97■□□□□ 0.47
CDK5RAP3-213ENST00000579605 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-213ENST00000579605 TEX13AQ9BXU3 409 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-213ENST00000579605 PIP4K2AP48426 406 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-213ENST00000579605 PANK3Q9H999 370 aa17.96■□□□□ 0.47
CDK5RAP3-213ENST00000579605 CACNA1SQ13698 1873 aa17.95■□□□□ 0.46
CDK5RAP3-213ENST00000579605 CELF2O95319 508 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-213ENST00000579605 CIAPIN1Q6FI81 312 aa17.95■□□□□ 0.46
CDK5RAP3-213ENST00000579605 HEG1Q9ULI3 1381 aa17.94■□□□□ 0.46
CDK5RAP3-213ENST00000579605 SCNN1DP51172 638 aa17.94■□□□□ 0.46
CDK5RAP3-213ENST00000579605 USP50Q70EL3 339 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-213ENST00000579605 MRC1P22897 1456 aa17.94■□□□□ 0.46
CDK5RAP3-213ENST00000579605 TNRC18O15417 2968 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 ALDH1B1P30837 517 aa17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 BRPF1P55201 1214 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 TEFQ10587 303 aa17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 ZNF790Q6PG37 636 aa17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 SAPCD2Q86UD0 394 aa17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 ZNF408Q9H9D4 720 aa17.93■□□□□ 0.46
CDK5RAP3-213ENST00000579605 TPTE2Q6XPS3 522 aa17.92■□□□□ 0.46
CDK5RAP3-213ENST00000579605 THSD7BQ9C0I4 1608 aa17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 KLRG2A4D1S0 409 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 GTF2E1P29083 439 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 LARGE2Q8N3Y3 721 aa17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 FMNL2Q96PY5 1086 aa17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 NIP7Q9Y221 180 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDK5RAP3-213ENST00000579605 LTBP1Q14766 1721 aa17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 PRPF38BQ5VTL8 546 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 ZIC5Q96T25 663 aa17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 PSMD1Q99460 953 aa17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 GLIS2Q9BZE0 524 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 CASP8AP2Q9UKL3 1982 aa17.9■□□□□ 0.46
CDK5RAP3-213ENST00000579605 ZNF652Q9Y2D9 606 aa17.89■□□□□ 0.45
CDK5RAP3-213ENST00000579605 KCNQ3O43525 872 aa17.88■□□□□ 0.45
CDK5RAP3-213ENST00000579605 CLEC4GQ6UXB4 293 aa17.88■□□□□ 0.45
CDK5RAP3-213ENST00000579605 IL17REQ8NFR9 667 aa17.88■□□□□ 0.45
CDK5RAP3-213ENST00000579605 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
CDK5RAP3-213ENST00000579605 ADARB2Q9NS39 739 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-213ENST00000579605 SLC51AQ86UW1 340 aa17.86■□□□□ 0.45
CDK5RAP3-213ENST00000579605 NIM1KQ8IY84 436 aa17.86■□□□□ 0.45
CDK5RAP3-213ENST00000579605 COL4A5P29400 1685 aa17.86■□□□□ 0.45
CDK5RAP3-213ENST00000579605 ARFGEF2Q9Y6D5 1785 aa17.86■□□□□ 0.45
CDK5RAP3-213ENST00000579605 PRAMEF22A3QJZ6 481 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms