RNA–Protein interactions for RNA: ENST00000579358.1

MKS1-208, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-208ENST00000579358 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
MKS1-208ENST00000579358 TBC1D9BQ66K14 1250 aa12.96□□□□□ -0.33
MKS1-208ENST00000579358 KLHL34Q8N239 644 aa12.96□□□□□ -0.33
MKS1-208ENST00000579358 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
MKS1-208ENST00000579358 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
MKS1-208ENST00000579358 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.33
MKS1-208ENST00000579358 BCORQ6W2J9 1755 aa12.96□□□□□ -0.34
MKS1-208ENST00000579358 ATP10DQ9P241 1426 aa12.96□□□□□ -0.34
MKS1-208ENST00000579358 E9PSI1 815 aa12.95□□□□□ -0.34
MKS1-208ENST00000579358 ELL2O00472 640 aaPredicted RBP12.95□□□□□ -0.34
MKS1-208ENST00000579358 ANXA1P04083 346 aa12.95□□□□□ -0.34
MKS1-208ENST00000579358 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
MKS1-208ENST00000579358 HYPKQ9NX55 129 aa12.95□□□□□ -0.34
MKS1-208ENST00000579358 SERPINB2P05120 415 aa12.94□□□□□ -0.34
MKS1-208ENST00000579358 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
MKS1-208ENST00000579358 BICDL1Q6ZP65 573 aa12.94□□□□□ -0.34
MKS1-208ENST00000579358 COPS6Q7L5N1 327 aa12.94□□□□□ -0.34
MKS1-208ENST00000579358 XAGE3Q8WTP9 111 aa12.94□□□□□ -0.34
MKS1-208ENST00000579358 SETDB2Q96T68 719 aa12.94□□□□□ -0.34
MKS1-208ENST00000579358 TGFB2P61812 414 aa12.93□□□□□ -0.34
MKS1-208ENST00000579358 EXOSC9Q06265 439 aaKnown RBP12.93□□□□□ -0.34
MKS1-208ENST00000579358 HLFQ16534 295 aa12.93□□□□□ -0.34
MKS1-208ENST00000579358 NLGN2Q8NFZ4 835 aa12.93□□□□□ -0.34
MKS1-208ENST00000579358 ZBTB3Q9H5J0 574 aa12.93□□□□□ -0.34
MKS1-208ENST00000579358 VAMP4O75379 141 aa12.92□□□□□ -0.34
MKS1-208ENST00000579358 SLFN5Q08AF3 891 aa12.92□□□□□ -0.34
MKS1-208ENST00000579358 HSP90AB3PQ58FF7 597 aa12.92□□□□□ -0.34
MKS1-208ENST00000579358 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
MKS1-208ENST00000579358 NRXN2Q9P2S2 1712 aa12.92□□□□□ -0.34
MKS1-208ENST00000579358 NIP7Q9Y221 180 aaKnown RBP eCLIP12.92□□□□□ -0.34
MKS1-208ENST00000579358 IBTKQ9P2D0 1353 aaPredicted RBP12.92□□□□□ -0.34
MKS1-208ENST00000579358 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
MKS1-208ENST00000579358 AIMP1Q12904 312 aaKnown RBP12.91□□□□□ -0.34
MKS1-208ENST00000579358 CNBD1Q8NA66 436 aa12.91□□□□□ -0.34
MKS1-208ENST00000579358 PLBD2Q8NHP8 589 aa12.91□□□□□ -0.34
MKS1-208ENST00000579358 PARP10Q53GL7 1025 aa12.9□□□□□ -0.34
MKS1-208ENST00000579358 PRR5LQ6MZQ0 368 aa12.9□□□□□ -0.34
MKS1-208ENST00000579358 ANKRD13DQ6ZTN6 518 aa12.9□□□□□ -0.34
MKS1-208ENST00000579358 NBPF5PQ86XG9 351 aaPredicted RBP12.9□□□□□ -0.34
MKS1-208ENST00000579358 ZNF34Q8IZ26 560 aa12.9□□□□□ -0.34
MKS1-208ENST00000579358 TRMT2AQ8IZ69 625 aaKnown RBP12.9□□□□□ -0.34
MKS1-208ENST00000579358 KIF13BQ9NQT8 1826 aa12.9□□□□□ -0.34
MKS1-208ENST00000579358 UBN2Q6ZU65 1347 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 DCAF8L1A6NGE4 600 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
MKS1-208ENST00000579358 ST5P78524 1137 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 HNRNPUQ00839 825 aaKnown RBP eCLIP12.89□□□□□ -0.35
MKS1-208ENST00000579358 TPTE2Q6XPS3 522 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 BRIP1Q9BX63 1249 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 NYXQ9GZU5 481 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 PHAXQ9H814 394 aaKnown RBP12.89□□□□□ -0.35
MKS1-208ENST00000579358 PDZRN3Q9UPQ7 1066 aa12.89□□□□□ -0.35
MKS1-208ENST00000579358 NPHP1O15259 732 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 TCIRG1Q13488 830 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 ZNF428Q96B54 188 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 CDCA7LQ96GN5 454 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 RIC1Q4ADV7 1423 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 RNF123Q5XPI4 1314 aa12.88□□□□□ -0.35
MKS1-208ENST00000579358 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
MKS1-208ENST00000579358 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
MKS1-208ENST00000579358 DPEP1P16444 411 aa12.87□□□□□ -0.35
MKS1-208ENST00000579358 GPTP24298 496 aa12.87□□□□□ -0.35
MKS1-208ENST00000579358 PDE6BP35913 854 aa12.87□□□□□ -0.35
MKS1-208ENST00000579358 PPP1R42Q7Z4L9 355 aa12.87□□□□□ -0.35
MKS1-208ENST00000579358 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 A0A0G2JLW4 131 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 TCERG1O14776 1098 aaKnown RBP12.86□□□□□ -0.35
MKS1-208ENST00000579358 NTSR2O95665 410 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 FLIIQ13045 1269 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 SUSD4Q5VX71 490 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
MKS1-208ENST00000579358 KCNA3P22001 575 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
MKS1-208ENST00000579358 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
MKS1-208ENST00000579358 GPR162Q16538 588 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 KSR2Q6VAB6 950 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 NLRP10Q86W26 655 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 ISCA1Q9BUE6 129 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 UTP14AQ9BVJ6 771 aaKnown RBP12.85□□□□□ -0.35
MKS1-208ENST00000579358 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
MKS1-208ENST00000579358 AFDNP55196 1824 aaKnown RBP12.85□□□□□ -0.35
MKS1-208ENST00000579358 ADCY9O60503 1353 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 ABCC12Q96J65 1359 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
MKS1-208ENST00000579358 FAM177BA6PVY3 158 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 H0YIN7 160 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 GRIN3BO60391 1043 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 CHRNA5P30532 468 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 G2E3Q7L622 706 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 C2CD5Q86YS7 1000 aa12.84□□□□□ -0.35
MKS1-208ENST00000579358 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
MKS1-208ENST00000579358 PI4KAP2A4QPH2 592 aa12.83□□□□□ -0.36
MKS1-208ENST00000579358 YBX3P16989 372 aaKnown RBP eCLIP12.83□□□□□ -0.36
MKS1-208ENST00000579358 FKBP5Q13451 457 aaPredicted RBP12.83□□□□□ -0.36
MKS1-208ENST00000579358 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
MKS1-208ENST00000579358 NUTM1Q86Y26 1132 aa12.83□□□□□ -0.36
MKS1-208ENST00000579358 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
MKS1-208ENST00000579358 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
MKS1-208ENST00000579358 PI4KAP1Q8N8J0 262 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms