RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 RTF1Q92541 710 aaKnown RBP25.67■■□□□ 1.7
CDKN2A-213ENST00000579122 POTECB2RU33 542 aa25.66■■□□□ 1.7
CDKN2A-213ENST00000579122 SRGNP10124 158 aa25.66■■□□□ 1.7
CDKN2A-213ENST00000579122 ERFEQ4G0M1 354 aa25.66■■□□□ 1.7
CDKN2A-213ENST00000579122 CLEC4GQ6UXB4 293 aa25.66■■□□□ 1.7
CDKN2A-213ENST00000579122 SNRPA1P09661 255 aaKnown RBP25.65■■□□□ 1.7
CDKN2A-213ENST00000579122 U2AF1L5P0DN76 240 aaPredicted RBP25.65■■□□□ 1.7
CDKN2A-213ENST00000579122 U2AF1Q01081 240 aaKnown RBP eCLIP25.65■■□□□ 1.7
CDKN2A-213ENST00000579122 TAOK3Q9H2K8 898 aa25.65■■□□□ 1.7
CDKN2A-213ENST00000579122 SOGA3Q5TF21 947 aa25.64■■□□□ 1.7
CDKN2A-213ENST00000579122 MCM10Q7L590 875 aa25.64■■□□□ 1.7
CDKN2A-213ENST00000579122 MASTLQ96GX5 879 aa25.64■■□□□ 1.7
CDKN2A-213ENST00000579122 DICER1Q9UPY3 1922 aaKnown RBP25.64■■□□□ 1.69
CDKN2A-213ENST00000579122 PRAMEF22A3QJZ6 481 aa25.63■■□□□ 1.69
CDKN2A-213ENST00000579122 PPP2R1AP30153 589 aa25.63■■□□□ 1.69
CDKN2A-213ENST00000579122 PIP4K2AP48426 406 aaPredicted RBP25.63■■□□□ 1.69
CDKN2A-213ENST00000579122 PRPF40BQ6NWY9 871 aaKnown RBP25.63■■□□□ 1.69
CDKN2A-213ENST00000579122 ZNF652Q9Y2D9 606 aa25.63■■□□□ 1.69
CDKN2A-213ENST00000579122 HTATSF1O43719 755 aaKnown RBP25.62■■□□□ 1.69
CDKN2A-213ENST00000579122 SLX4Q8IY92 1834 aa25.61■■□□□ 1.69
CDKN2A-213ENST00000579122 RGL2O15211 777 aa25.61■■□□□ 1.69
CDKN2A-213ENST00000579122 NBPF5PQ86XG9 351 aaPredicted RBP25.61■■□□□ 1.69
CDKN2A-213ENST00000579122 ARFGEF2Q9Y6D5 1785 aa25.61■■□□□ 1.69
CDKN2A-213ENST00000579122 DCTN1Q14203 1278 aa25.58■■□□□ 1.69
CDKN2A-213ENST00000579122 C7orf43Q8WVR3 580 aa25.58■■□□□ 1.69
CDKN2A-213ENST00000579122 KLRG2A4D1S0 409 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 NBPF26B4DH59 902 aa25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 NPR1P16066 1061 aa25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 COL13A1Q5TAT6 717 aaPredicted RBP25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 NBPF10Q6P3W6 841 aaKnown RBP25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 NBPF15Q8N660 670 aa25.57■■□□□ 1.68
CDKN2A-213ENST00000579122 CACNA1SQ13698 1873 aa25.56■■□□□ 1.68
CDKN2A-213ENST00000579122 TAF7Q15545 349 aaPredicted RBP25.56■■□□□ 1.68
CDKN2A-213ENST00000579122 TPTE2Q6XPS3 522 aa25.56■■□□□ 1.68
CDKN2A-213ENST00000579122 NIP7Q9Y221 180 aaKnown RBP eCLIP25.56■■□□□ 1.68
CDKN2A-213ENST00000579122 DDNO94850 711 aaPredicted RBP25.55■■□□□ 1.68
CDKN2A-213ENST00000579122 CCDC93Q567U6 631 aa25.55■■□□□ 1.68
CDKN2A-213ENST00000579122 CHADLQ6NUI6 762 aa25.54■■□□□ 1.68
CDKN2A-213ENST00000579122 IQCA1LA6NCM1 817 aa25.5■■□□□ 1.67
CDKN2A-213ENST00000579122 FKBP4Q02790 459 aaKnown RBP eCLIP25.5■■□□□ 1.67
CDKN2A-213ENST00000579122 HLFQ16534 295 aa25.5■■□□□ 1.67
CDKN2A-213ENST00000579122 L3MBTL3Q96JM7 780 aaPredicted RBP25.5■■□□□ 1.67
CDKN2A-213ENST00000579122 LAMB4A4D0S4 1761 aa25.49■■□□□ 1.67
CDKN2A-213ENST00000579122 PNISRQ8TF01 805 aaKnown RBP25.49■■□□□ 1.67
CDKN2A-213ENST00000579122 CREBZFQ9NS37 354 aa25.49■■□□□ 1.67
CDKN2A-213ENST00000579122 MIS18AQ9NYP9 233 aa25.49■■□□□ 1.67
CDKN2A-213ENST00000579122 FAM177BA6PVY3 158 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 NEFMP07197 916 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 POTEIP0CG38 1075 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 POTEJP0CG39 1038 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 HSPA1AP0DMV8 641 aaKnown RBP25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 HSPA1BP0DMV9 641 aaKnown RBP25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 ALDH1B1P30837 517 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 RTKN2Q8IZC4 609 aa25.48■■□□□ 1.67
CDKN2A-213ENST00000579122 GTF2E1P29083 439 aaPredicted RBP25.46■■□□□ 1.67
CDKN2A-213ENST00000579122 LDHDQ86WU2 507 aa25.46■■□□□ 1.67
CDKN2A-213ENST00000579122 ZNF277Q9NRM2 450 aaPredicted RBP25.46■■□□□ 1.67
CDKN2A-213ENST00000579122 SCN4AP35499 1836 aa25.46■■□□□ 1.67
CDKN2A-213ENST00000579122 ERVV-1B6SEH8 477 aa25.45■■□□□ 1.66
CDKN2A-213ENST00000579122 OLFM4Q6UX06 510 aa25.45■■□□□ 1.66
CDKN2A-213ENST00000579122 TNS4Q8IZW8 715 aa25.45■■□□□ 1.66
CDKN2A-213ENST00000579122 NYXQ9GZU5 481 aa25.45■■□□□ 1.66
CDKN2A-213ENST00000579122 TAF1DQ9H5J8 278 aaPredicted RBP25.45■■□□□ 1.66
CDKN2A-213ENST00000579122 KDM3BQ7LBC6 1761 aa25.44■■□□□ 1.66
CDKN2A-213ENST00000579122 CRY2Q49AN0 593 aa25.43■■□□□ 1.66
CDKN2A-213ENST00000579122 PLEKHF1Q96S99 279 aa25.43■■□□□ 1.66
CDKN2A-213ENST00000579122 MAP3K15Q6ZN16 1313 aa25.42■■□□□ 1.66
CDKN2A-213ENST00000579122 PASKQ96RG2 1323 aa25.42■■□□□ 1.66
CDKN2A-213ENST00000579122 ZNF541Q9H0D2 1346 aa25.42■■□□□ 1.66
CDKN2A-213ENST00000579122 EIF4A1P60842 406 aaKnown RBP25.42■■□□□ 1.66
CDKN2A-213ENST00000579122 NGEFQ8N5V2 710 aa25.42■■□□□ 1.66
CDKN2A-213ENST00000579122 DLG5Q8TDM6 1919 aa25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 IARSP41252 1262 aaKnown RBP25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 NFE2L2Q16236 605 aa25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 KIF6Q6ZMV9 814 aa25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 SYNE4Q8N205 404 aa25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 MKRN1Q9UHC7 482 aaKnown RBP25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 ABCC12Q96J65 1359 aa25.41■■□□□ 1.66
CDKN2A-213ENST00000579122 PSMD1Q99460 953 aa25.4■■□□□ 1.66
CDKN2A-213ENST00000579122 HACL1Q9UJ83 578 aa25.4■■□□□ 1.66
CDKN2A-213ENST00000579122 RRP7AQ9Y3A4 280 aaKnown RBP25.4■■□□□ 1.66
CDKN2A-213ENST00000579122 RIC1Q4ADV7 1423 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 SNED1Q8TER0 1413 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 FZD9O00144 591 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 CC2D2BQ6DHV5 1058 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 TTLL7Q6ZT98 887 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 NUTM1Q86Y26 1132 aa25.39■■□□□ 1.66
CDKN2A-213ENST00000579122 IBTKQ9P2D0 1353 aaPredicted RBP25.39■■□□□ 1.65
CDKN2A-213ENST00000579122 NUP98P52948 1817 aa25.38■■□□□ 1.65
CDKN2A-213ENST00000579122 PNNQ9H307 717 aaKnown RBP25.38■■□□□ 1.65
CDKN2A-213ENST00000579122 CNTNAP1P78357 1384 aa25.37■■□□□ 1.65
CDKN2A-213ENST00000579122 MYL6BP14649 208 aa25.37■■□□□ 1.65
CDKN2A-213ENST00000579122 HOXA10P31260 410 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-213ENST00000579122 EAPPQ56P03 285 aaPredicted RBP25.37■■□□□ 1.65
CDKN2A-213ENST00000579122 ITGBL1O95965 494 aaPredicted RBP25.36■■□□□ 1.65
CDKN2A-213ENST00000579122 EPHX2P34913 555 aa25.36■■□□□ 1.65
CDKN2A-213ENST00000579122 PNMA8AQ86V59 439 aaPredicted RBP25.36■■□□□ 1.65
CDKN2A-213ENST00000579122 GPC2Q8N158 579 aa25.36■■□□□ 1.65
CDKN2A-213ENST00000579122 RPGRQ92834 1020 aaKnown RBP25.36■■□□□ 1.65
CDKN2A-213ENST00000579122 THUMPD2Q9BTF0 503 aaKnown RBP25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms