RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, human

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-208	ENST00000578830	PANK3	Q9H999	370 aa		11.95	□□□□□ -0.5
NUP85-208	ENST00000578830	SIPA1L3	O60292	1781 aa	Predicted RBP	11.95	□□□□□ -0.5
NUP85-208	ENST00000578830	TTLL13P	A6NNM8	815 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	LMNB1	P20700	586 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	AKAP4	Q5JQC9	854 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	DNAJC10	Q8IXB1	793 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	NARF	Q9UHQ1	456 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	METRN	Q9UJH8	293 aa		11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	COL11A2	P13942	1736 aa	Predicted RBP	11.94	□□□□□ -0.5
NUP85-208	ENST00000578830	COL15A1	P39059	1388 aa		11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	CYP19A1	P11511	503 aa	Predicted RBP	11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	RASSF7	Q02833	373 aa		11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	MORC1	Q86VD1	984 aa		11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	SLC52A2	Q9HAB3	445 aa		11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	SCN7A	Q01118	1682 aa		11.93	□□□□□ -0.5
NUP85-208	ENST00000578830	GLTPD2	A6NH11	291 aa		11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	POTEB2	H3BUK9	544 aa		11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	VEGFA	P15692	232 aa	Predicted RBP	11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	IL13	P35225	146 aa		11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	NFIX	Q14938	502 aa		11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	PCDHB8	Q9UN66	801 aa		11.92	□□□□□ -0.5
NUP85-208	ENST00000578830	SCN4A	P35499	1836 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	SLX4	Q8IY92	1834 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	PRELP	P51888	382 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	TNS4	Q8IZW8	715 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	TTLL6	Q8N841	843 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	LGR6	Q9HBX8	967 aa		11.91	□□□□□ -0.5
NUP85-208	ENST00000578830	BCOR	Q6W2J9	1755 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	SERPINB2	P05120	415 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	SLC39A6	Q13433	755 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	VSIG10	Q8N0Z9	540 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	SLC39A7	Q92504	469 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	BCL2L12	Q9HB09	334 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	ZBTB1	Q9Y2K1	713 aa		11.9	□□□□□ -0.5
NUP85-208	ENST00000578830	KIF7	Q2M1P5	1343 aa		11.89	□□□□□ -0.51
NUP85-208	ENST00000578830		H0YIN7	160 aa		11.89	□□□□□ -0.51
NUP85-208	ENST00000578830	RNMT	O43148	476 aa	Known RBP	11.89	□□□□□ -0.51
NUP85-208	ENST00000578830	C2CD5	Q86YS7	1000 aa		11.89	□□□□□ -0.51
NUP85-208	ENST00000578830	NFKBIE	O00221	500 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	C7	P10643	843 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	TMEM106C	Q9BVX2	250 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	PDZRN3	Q9UPQ7	1066 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	KNSTRN	Q9Y448	316 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	CARMIL3	Q8ND23	1372 aa		11.88	□□□□□ -0.51
NUP85-208	ENST00000578830	HSPA1A	P0DMV8	641 aa	Known RBP	11.87	□□□□□ -0.51
NUP85-208	ENST00000578830	HSPA1B	P0DMV9	641 aa	Known RBP	11.87	□□□□□ -0.51
NUP85-208	ENST00000578830		A0A087WZG4	1122 aa		11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	POTEC	B2RU33	542 aa		11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	STARD3NL	O95772	234 aa		11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	CANX	P27824	592 aa	Known RBP	11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	EIF5	P55010	431 aa	Known RBP	11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	DPY19L2	Q6NUT2	758 aa		11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	TRIM35	Q9UPQ4	493 aa		11.86	□□□□□ -0.51
NUP85-208	ENST00000578830	HMOX1	P09601	288 aa		11.85	□□□□□ -0.51
NUP85-208	ENST00000578830	PDE6B	P35913	854 aa		11.85	□□□□□ -0.51
NUP85-208	ENST00000578830	MTHFSD	Q2M296	383 aa	Known RBP	11.85	□□□□□ -0.51
NUP85-208	ENST00000578830	BRIP1	Q9BX63	1249 aa		11.85	□□□□□ -0.51
NUP85-208	ENST00000578830	ERFE	Q4G0M1	354 aa		11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	BICDL1	Q6ZP65	573 aa		11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	TTC5	Q8N0Z6	440 aa		11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	LTBP3	Q9NS15	1303 aa		11.84	□□□□□ -0.51
NUP85-208	ENST00000578830	POTEF	A5A3E0	1075 aa		11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	C21orf2	O43822	256 aa		11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	CHRM1	P11229	460 aa	Predicted RBP	11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	TBC1D9B	Q66K14	1250 aa		11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	PRR5L	Q6MZQ0	368 aa		11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.83	□□□□□ -0.52
NUP85-208	ENST00000578830	HEG1	Q9ULI3	1381 aa		11.82	□□□□□ -0.52
NUP85-208	ENST00000578830	DIAPH1	O60610	1272 aa	Known RBP	11.82	□□□□□ -0.52
NUP85-208	ENST00000578830	IL6ST	P40189	918 aa	Predicted RBP	11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	DDX10	Q13206	875 aa	Known RBP	11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	ZNF790	Q6PG37	636 aa		11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	CNKSR1	Q969H4	720 aa		11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	ZNF496	Q96IT1	587 aa	Predicted RBP	11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	TAOK3	Q9H2K8	898 aa		11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	NUP98	P52948	1817 aa		11.81	□□□□□ -0.52
NUP85-208	ENST00000578830	TRPM7	Q96QT4	1865 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	ADAMTSL1	Q8N6G6	1762 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	POTEJ	P0CG39	1038 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	TEF	Q10587	303 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	SOGA3	Q5TF21	947 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	STYK1	Q6J9G0	422 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	SETDB2	Q96T68	719 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	TBC1D2B	Q9UPU7	963 aa		11.8	□□□□□ -0.52
NUP85-208	ENST00000578830	COL3A1	P02461	1466 aa	Predicted RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	GNAT3	A8MTJ3	354 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	DDN	O94850	711 aa	Predicted RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	SRGN	P10124	158 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	ST5	P78524	1137 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	DIEXF	Q68CQ4	756 aa	Known RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	PRPF40B	Q6NWY9	871 aa	Known RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	NPM2	Q86SE8	214 aa	Known RBP	11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	CCDC24	Q8N4L8	307 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	CNBD1	Q8NA66	436 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	IL17RE	Q8NFR9	667 aa		11.79	□□□□□ -0.52
NUP85-208	ENST00000578830	OTUD5	Q96G74	571 aa		11.79	□□□□□ -0.52

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