RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PDGFDQ9GZP0 370 aaPredicted RBP14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PTPRCP08575 1304 aa14.38□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 TCERG1O14776 1098 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MSH5O43196 834 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PIP4K2AP48426 406 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 BRPF1P55201 1214 aaPredicted RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PDIA6Q15084 440 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 DZIP3Q86Y13 1208 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ZNF652Q9Y2D9 606 aa14.37□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ANXA1P04083 346 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 AIMP1Q12904 312 aaKnown RBP14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 FLIIQ13045 1269 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 COPS6Q7L5N1 327 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 XAGE3Q8WTP9 111 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 SGIP1Q9BQI5 828 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 BCL2L13Q9BXK5 485 aa14.36□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RGL2O15211 777 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MS4A1P11836 297 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PROSER3Q2NL68 480 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 HSP90AB3PQ58FF7 597 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ARHGEF1Q92888 912 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PHAXQ9H814 394 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NARFQ9UHQ1 456 aa14.35□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ERVV-1B6SEH8 477 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 RIC3Q7Z5B4 369 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PLBD2Q8NHP8 589 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 API5Q9BZZ5 524 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 MAP3K15Q6ZN16 1313 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 PNPLA7Q6ZV29 1317 aa14.34□□□□□ -0.11
CDK5RAP3-210ENST00000578733 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ZKSCAN2Q63HK3 967 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SLC16A10Q8TF71 515 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ARHGAP45Q92619 1136 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 FRAT1Q92837 279 aaPredicted RBP14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 TBC1D2BQ9UPU7 963 aa14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 USP42Q9H9J4 1324 aaKnown RBP14.33□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PXDNLA1KZ92 1463 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 BCAR3O75815 825 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CLEC4GQ6UXB4 293 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 TTLL7Q6ZT98 887 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 LRP10Q7Z4F1 713 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ZBTB3Q9H5J0 574 aa14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-210ENST00000578733 USPL1Q5W0Q7 1092 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 G2E3Q7L622 706 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 COL23A1Q86Y22 540 aaPredicted RBP14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 COL24A1Q17RW2 1714 aa14.31□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PI4KAP2A4QPH2 592 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CAMTA2O94983 1202 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GPR162Q16538 588 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ATF7IPQ6VMQ6 1270 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GIGYF2Q6Y7W6 1299 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 FTSJ3Q8IY81 847 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 NLGN1Q8N2Q7 840 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PI4KAP1Q8N8J0 262 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 MAP3K2Q9Y2U5 619 aa14.3□□□□□ -0.12
CDK5RAP3-210ENST00000578733 MYH3P11055 1940 aa14.29□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ATP10DQ9P241 1426 aa14.29□□□□□ -0.12
CDK5RAP3-210ENST00000578733 PARP10Q53GL7 1025 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 CEP350Q5VT06 3117 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SLC4A10Q6U841 1118 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 AMIGO3Q86WK7 504 aa14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 METTL22Q9BUU2 404 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 SRP68Q9UHB9 627 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-210ENST00000578733 LAMB2P55268 1798 aa14.27□□□□□ -0.12
CDK5RAP3-210ENST00000578733 ADCY9O60503 1353 aa14.27□□□□□ -0.12
CDK5RAP3-210ENST00000578733 GYS1P13807 737 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CCT4P50991 539 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SMIM5Q71RC9 77 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SETDB2Q96T68 719 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 MYD88Q99836 296 aa14.27□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CARMIL3Q8ND23 1372 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NPHP1O15259 732 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 POLD1P28340 1107 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 HLFQ16534 295 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PPP1R42Q7Z4L9 355 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 DZIP1LQ8IYY4 767 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 LINS1Q8NG48 757 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NIP7Q9Y221 180 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NRXN2Q9P2S2 1712 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 F6X3S4 739 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 TRIM27P14373 513 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 FKBP8Q14318 412 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 CHMP4BQ9H444 224 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 PARP3Q9Y6F1 533 aa14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 GOLGB1Q14789 3259 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ABCC4O15439 1325 aa14.24□□□□□ -0.13
CDK5RAP3-210ENST00000578733 ALDH1L1O75891 902 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 320.2 ms