RNA–Protein interactions for RNA: ENST00000578709.5

ERBB2-209, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 4

Gene ERBB2, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-209ENST00000578709 DDR1Q08345 913 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 NFIXQ14938 502 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 KIF6Q6ZMV9 814 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 MAP3K15Q6ZN16 1313 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 TRMT2AQ8IZ69 625 aaKnown RBP30.6■■■□□ 2.49
ERBB2-209ENST00000578709 CDCA7LQ96GN5 454 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 HYPKQ9NX55 129 aa30.6■■■□□ 2.49
ERBB2-209ENST00000578709 VAMP4O75379 141 aa30.59■■■□□ 2.49
ERBB2-209ENST00000578709 ZNF652Q9Y2D9 606 aa30.59■■■□□ 2.49
ERBB2-209ENST00000578709 POLRMTO00411 1230 aaKnown RBP30.58■■■□□ 2.49
ERBB2-209ENST00000578709 XAGE3Q8WTP9 111 aa30.58■■■□□ 2.49
ERBB2-209ENST00000578709 PARP3Q9Y6F1 533 aa30.58■■■□□ 2.49
ERBB2-209ENST00000578709 TBC1D9BQ66K14 1250 aa30.57■■■□□ 2.48
ERBB2-209ENST00000578709 COPS6Q7L5N1 327 aa30.57■■■□□ 2.48
ERBB2-209ENST00000578709 FHDC1Q9C0D6 1143 aaPredicted RBP30.57■■■□□ 2.48
ERBB2-209ENST00000578709 NUP98P52948 1817 aa30.55■■■□□ 2.48
ERBB2-209ENST00000578709 HLFQ16534 295 aa30.55■■■□□ 2.48
ERBB2-209ENST00000578709 AIMP1Q12904 312 aaKnown RBP30.53■■■□□ 2.48
ERBB2-209ENST00000578709 BICDL1Q6ZP65 573 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 SYT17Q9BSW7 474 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 STK31Q9BXU1 1019 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 ZBTB3Q9H5J0 574 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 CD2APQ9Y5K6 639 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 CACNA1FO60840 1977 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 NRXN2Q9P2S2 1712 aa30.53■■■□□ 2.48
ERBB2-209ENST00000578709 ATP10DQ9P241 1426 aa30.52■■■□□ 2.48
ERBB2-209ENST00000578709 CARMIL3Q8ND23 1372 aa30.52■■■□□ 2.48
ERBB2-209ENST00000578709 AFDNP55196 1824 aaKnown RBP30.52■■■□□ 2.48
ERBB2-209ENST00000578709 ZBED9Q6R2W3 1325 aa30.51■■■□□ 2.48
ERBB2-209ENST00000578709 GIGYF2Q6Y7W6 1299 aaKnown RBP30.51■■■□□ 2.47
ERBB2-209ENST00000578709 SETDB2Q96T68 719 aa30.51■■■□□ 2.47
ERBB2-209ENST00000578709 KIF13BQ9NQT8 1826 aa30.51■■■□□ 2.47
ERBB2-209ENST00000578709 C10orf71Q711Q0 1435 aa30.5■■■□□ 2.47
ERBB2-209ENST00000578709 SERPINB2P05120 415 aa30.5■■■□□ 2.47
ERBB2-209ENST00000578709 PLBD2Q8NHP8 589 aa30.49■■■□□ 2.47
ERBB2-209ENST00000578709 PHAXQ9H814 394 aaKnown RBP30.49■■■□□ 2.47
ERBB2-209ENST00000578709 TCERG1O14776 1098 aaKnown RBP30.48■■■□□ 2.47
ERBB2-209ENST00000578709 ANKRD13DQ6ZTN6 518 aa30.48■■■□□ 2.47
ERBB2-209ENST00000578709 NIP7Q9Y221 180 aaKnown RBP eCLIP30.48■■■□□ 2.47
ERBB2-209ENST00000578709 SLC4A2P04920 1241 aa30.47■■■□□ 2.47
ERBB2-209ENST00000578709 KLHL34Q8N239 644 aa30.47■■■□□ 2.47
ERBB2-209ENST00000578709 ZNF34Q8IZ26 560 aa30.46■■■□□ 2.47
ERBB2-209ENST00000578709 HSP90AB3PQ58FF7 597 aa30.44■■■□□ 2.46
ERBB2-209ENST00000578709 NLGN2Q8NFZ4 835 aa30.43■■■□□ 2.46
ERBB2-209ENST00000578709 ZNF428Q96B54 188 aa30.43■■■□□ 2.46
ERBB2-209ENST00000578709 ANKRD36CQ5JPF3 1778 aa30.43■■■□□ 2.46
ERBB2-209ENST00000578709 CT47B1P0C2W7 299 aaPredicted RBP30.42■■■□□ 2.46
ERBB2-209ENST00000578709 TCIRG1Q13488 830 aa30.42■■■□□ 2.46
ERBB2-209ENST00000578709 G2E3Q7L622 706 aa30.42■■■□□ 2.46
ERBB2-209ENST00000578709 UBN2Q6ZU65 1347 aa30.42■■■□□ 2.46
ERBB2-209ENST00000578709 ARFGEF2Q9Y6D5 1785 aa30.41■■■□□ 2.46
ERBB2-209ENST00000578709 DDX58O95786 925 aaKnown RBP30.41■■■□□ 2.46
ERBB2-209ENST00000578709 PRR5LQ6MZQ0 368 aa30.41■■■□□ 2.46
ERBB2-209ENST00000578709 NBPF5PQ86XG9 351 aaPredicted RBP30.41■■■□□ 2.46
ERBB2-209ENST00000578709 GPTP24298 496 aa30.4■■■□□ 2.46
ERBB2-209ENST00000578709 CNBD1Q8NA66 436 aa30.4■■■□□ 2.46
ERBB2-209ENST00000578709 IBTKQ9P2D0 1353 aaPredicted RBP30.4■■■□□ 2.46
ERBB2-209ENST00000578709 KIAA1551Q9HCM1 1747 aa30.39■■■□□ 2.46
ERBB2-209ENST00000578709 TGFB2P61812 414 aa30.39■■■□□ 2.46
ERBB2-209ENST00000578709 FLIIQ13045 1269 aa30.39■■■□□ 2.46
ERBB2-209ENST00000578709 PARP10Q53GL7 1025 aa30.39■■■□□ 2.46
ERBB2-209ENST00000578709 RIC3Q7Z5B4 369 aa30.39■■■□□ 2.46
ERBB2-209ENST00000578709 TPTE2Q6XPS3 522 aa30.38■■■□□ 2.45
ERBB2-209ENST00000578709 PXDNLA1KZ92 1463 aa30.38■■■□□ 2.45
ERBB2-209ENST00000578709 KSR2Q6VAB6 950 aa30.37■■■□□ 2.45
ERBB2-209ENST00000578709 SUSD4Q5VX71 490 aa30.36■■■□□ 2.45
ERBB2-209ENST00000578709 ISCA1Q9BUE6 129 aa30.36■■■□□ 2.45
ERBB2-209ENST00000578709 NYXQ9GZU5 481 aa30.36■■■□□ 2.45
ERBB2-209ENST00000578709 ADCY9O60503 1353 aa30.36■■■□□ 2.45
ERBB2-209ENST00000578709 PI4KAP2A4QPH2 592 aa30.35■■■□□ 2.45
ERBB2-209ENST00000578709 NLRP10Q86W26 655 aa30.35■■■□□ 2.45
ERBB2-209ENST00000578709 PI4KAP1Q8N8J0 262 aa30.35■■■□□ 2.45
ERBB2-209ENST00000578709 BRIP1Q9BX63 1249 aa30.35■■■□□ 2.45
ERBB2-209ENST00000578709 ANKRD31Q8N7Z5 1873 aa30.35■■■□□ 2.45
ERBB2-209ENST00000578709 ST5P78524 1137 aa30.34■■■□□ 2.45
ERBB2-209ENST00000578709 TRIM28Q13263 835 aaKnown RBP30.34■■■□□ 2.45
ERBB2-209ENST00000578709 ALDH1L2Q3SY69 923 aa30.34■■■□□ 2.45
ERBB2-209ENST00000578709 SSH1Q8WYL5 1049 aa30.34■■■□□ 2.45
ERBB2-209ENST00000578709 MAP3K2Q9Y2U5 619 aa30.34■■■□□ 2.45
ERBB2-209ENST00000578709 FAM177BA6PVY3 158 aa30.33■■■□□ 2.45
ERBB2-209ENST00000578709 NPHP1O15259 732 aa30.33■■■□□ 2.45
ERBB2-209ENST00000578709 NTSR2O95665 410 aa30.33■■■□□ 2.45
ERBB2-209ENST00000578709 PPP1R42Q7Z4L9 355 aa30.33■■■□□ 2.45
ERBB2-209ENST00000578709 MRPL50Q8N5N7 158 aaKnown RBP30.33■■■□□ 2.45
ERBB2-209ENST00000578709 METTL22Q9BUU2 404 aaPredicted RBP30.33■■■□□ 2.45
ERBB2-209ENST00000578709 N4BP2Q86UW6 1770 aaPredicted RBP30.33■■■□□ 2.45
ERBB2-209ENST00000578709 FKBP5Q13451 457 aaPredicted RBP30.32■■■□□ 2.44
ERBB2-209ENST00000578709 CCDC24Q8N4L8 307 aa30.32■■■□□ 2.44
ERBB2-209ENST00000578709 DPEP1P16444 411 aa30.31■■■□□ 2.44
ERBB2-209ENST00000578709 UTP14AQ9BVJ6 771 aaKnown RBP30.31■■■□□ 2.44
ERBB2-209ENST00000578709 RNF123Q5XPI4 1314 aa30.3■■■□□ 2.44
ERBB2-209ENST00000578709 A0A0G2JLW4 131 aa30.3■■■□□ 2.44
ERBB2-209ENST00000578709 ATP5J2-PTCD1G3V325 749 aa30.3■■■□□ 2.44
ERBB2-209ENST00000578709 MYD88Q99836 296 aa30.3■■■□□ 2.44
ERBB2-209ENST00000578709 KCNA3P22001 575 aa30.29■■■□□ 2.44
ERBB2-209ENST00000578709 PDE6BP35913 854 aa30.29■■■□□ 2.44
ERBB2-209ENST00000578709 PDZRN3Q9UPQ7 1066 aa30.29■■■□□ 2.44
ERBB2-209ENST00000578709 BRCA1P38398 1863 aaKnown RBP30.28■■■□□ 2.44
ERBB2-209ENST00000578709 GTF2E1P29083 439 aaPredicted RBP30.28■■■□□ 2.44
ERBB2-209ENST00000578709 ERFEQ4G0M1 354 aa30.28■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms