RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 MRE11P49959 708 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 AIMP1Q12904 312 aaKnown RBP11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 SLC39A6Q13433 755 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 TMX3Q96JJ7 454 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 DNAJC5Q9H3Z4 198 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 GLI3P10071 1580 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 RAD50Q92878 1312 aa11.35□□□□□ -0.59
CDK5RAP3-208ENST00000578525 MAP4K4O95819 1239 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 IGKV5-2P06315 115 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 SNRPA1P09661 255 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 IFIT2P09913 472 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 NEXNQ0ZGT2 675 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CHRNA2Q15822 529 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 TTC5Q8N0Z6 440 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ZGPATQ8N5A5 531 aaKnown RBP11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 CABLES1Q8TDN4 633 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 XAGE3Q8WTP9 111 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 ECHDC1Q9NTX5 307 aa11.34□□□□□ -0.59
CDK5RAP3-208ENST00000578525 NEURL1BA8MQ27 555 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 CYP27B1O15528 508 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 XRCC6P12956 609 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 NFATC2IPQ8NCF5 419 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 RUFY2Q8WXA3 655 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 INTS4Q96HW7 963 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 KAZALD1Q96I82 304 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ZNF496Q96IT1 587 aaPredicted RBP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 FMNL2Q96PY5 1086 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 LSG1Q9H089 658 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 IL25Q9H293 177 aa11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 BICC1Q9H694 974 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PA2G4Q9UQ80 394 aaKnown RBP11.33□□□□□ -0.6
CDK5RAP3-208ENST00000578525 COL15A1P39059 1388 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ARFGEF2Q9Y6D5 1785 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 MYL6BP14649 208 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 CABP4P57796 275 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 KLHL40Q2TBA0 621 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 KIAA1211Q6ZU35 1233 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 COPS6Q7L5N1 327 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 AACSQ86V21 672 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 MYD88Q99836 296 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 DIAPH3Q9NSV4 1193 aa11.32□□□□□ -0.6
CDK5RAP3-208ENST00000578525 AFDNP55196 1824 aaKnown RBP11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 GCKRQ14397 625 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 MCTP1Q6DN14 999 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 EVI5LQ96CN4 794 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 GRPEL1Q9HAV7 217 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ZDHHC9Q9Y397 364 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 SNX14Q9Y5W7 946 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ABCA3Q99758 1704 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ERBB4Q15303 1308 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PAPPAQ13219 1627 aa11.31□□□□□ -0.6
CDK5RAP3-208ENST00000578525 HIP1O00291 1037 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 SASH1O94885 1247 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PKP1Q13835 747 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ANKRD13DQ6ZTN6 518 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 BRINP3Q76B58 766 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 FAM43AQ8N2R8 423 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 LMBRD1Q9NUN5 540 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 USP16Q9Y5T5 823 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 DDX49Q9Y6V7 483 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 WDR17Q8IZU2 1322 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PCDH11XQ9BZA7 1347 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PCDH11YQ9BZA8 1340 aa11.3□□□□□ -0.6
CDK5RAP3-208ENST00000578525 UBR2Q8IWV8 1755 aa11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 BRD1O95696 1058 aa11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 HSPA2P54652 639 aa11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 CWC27Q6UX04 472 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ARXQ96QS3 562 aa11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 UPF3BQ9BZI7 483 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 RTN4Q9NQC3 1192 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-208ENST00000578525 COL5A2P05997 1499 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 EPHA10Q5JZY3 1008 aa11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 NOL8Q76FK4 1167 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 PLBD2Q8NHP8 589 aa11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 KCNB2Q92953 911 aa11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 EAF2Q96CJ1 260 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 TTC14Q96N46 770 aa11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 COPRSQ9NQ92 184 aa11.28□□□□□ -0.6
CDK5RAP3-208ENST00000578525 NUP188Q5SRE5 1749 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 KCPQ6ZWJ8 1503 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RFX5P48382 616 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 ZNF445P59923 1031 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 RABL6Q3YEC7 729 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 GAS2L3Q86XJ1 694 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PANK2Q9BZ23 570 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 CCDC8Q9H0W5 538 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PRDM11Q9NQV5 511 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SNRKQ9NRH2 765 aa11.27□□□□□ -0.61
CDK5RAP3-208ENST00000578525 SHANK3Q9BYB0 1731 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 STRCQ7RTU9 1775 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 PTH1RQ03431 593 aa11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NMIQ13287 307 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-208ENST00000578525 NKX1-1Q15270 411 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms