RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 DDX58O95786 925 aaKnown RBP21.22■□□□□ 0.99
SREBF1-218ENST00000578469 PRIM1P49642 420 aaKnown RBP21.22■□□□□ 0.99
SREBF1-218ENST00000578469 SKAP1Q86WV1 359 aa21.22■□□□□ 0.99
SREBF1-218ENST00000578469 LY75O60449 1722 aa21.21■□□□□ 0.99
SREBF1-218ENST00000578469 DNAAF4Q8WXU2 420 aa21.21■□□□□ 0.99
SREBF1-218ENST00000578469 MEIS3Q99687 375 aa21.21■□□□□ 0.99
SREBF1-218ENST00000578469 TMOD3Q9NYL9 352 aa21.21■□□□□ 0.99
SREBF1-218ENST00000578469 CCNL1Q9UK58 526 aaPredicted RBP21.21■□□□□ 0.99
SREBF1-218ENST00000578469 PRAMEF22A3QJZ6 481 aa21.2■□□□□ 0.98
SREBF1-218ENST00000578469 MSH5O43196 834 aa21.2■□□□□ 0.98
SREBF1-218ENST00000578469 ANKRD44Q8N8A2 993 aa21.2■□□□□ 0.98
SREBF1-218ENST00000578469 SRCIN1Q9C0H9 1055 aa21.2■□□□□ 0.98
SREBF1-218ENST00000578469 GOLGB1Q14789 3259 aaKnown RBP21.2■□□□□ 0.98
SREBF1-218ENST00000578469 GRIN3BO60391 1043 aa21.19■□□□□ 0.98
SREBF1-218ENST00000578469 ANXA1P04083 346 aa21.19■□□□□ 0.98
SREBF1-218ENST00000578469 GNAI2P04899 355 aa21.19■□□□□ 0.98
SREBF1-218ENST00000578469 HMGB2P26583 209 aaKnown RBP21.19■□□□□ 0.98
SREBF1-218ENST00000578469 PI4KAP2A4QPH2 592 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 HMMRO75330 724 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 PDE4AP27815 886 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 KCNQ4P56696 695 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 KSR2Q6VAB6 950 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 PI4KAP1Q8N8J0 262 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 NLGN2Q8NFZ4 835 aa21.18■□□□□ 0.98
SREBF1-218ENST00000578469 ERBB4Q15303 1308 aa21.17■□□□□ 0.98
SREBF1-218ENST00000578469 N4BP2Q86UW6 1770 aaPredicted RBP21.17■□□□□ 0.98
SREBF1-218ENST00000578469 ATP10DQ9P241 1426 aa21.16■□□□□ 0.98
SREBF1-218ENST00000578469 PROSER3Q2NL68 480 aa21.16■□□□□ 0.98
SREBF1-218ENST00000578469 CEP85Q6P2H3 762 aa21.16■□□□□ 0.98
SREBF1-218ENST00000578469 SIRT2Q8IXJ6 389 aa21.16■□□□□ 0.98
SREBF1-218ENST00000578469 C5P01031 1676 aa21.15■□□□□ 0.98
SREBF1-218ENST00000578469 NUCB1Q02818 461 aa21.15■□□□□ 0.98
SREBF1-218ENST00000578469 PDIA6Q15084 440 aa21.15■□□□□ 0.98
SREBF1-218ENST00000578469 USP16Q9Y5T5 823 aa21.15■□□□□ 0.98
SREBF1-218ENST00000578469 ADCY9O60503 1353 aa21.14■□□□□ 0.98
SREBF1-218ENST00000578469 ALDH1L1O75891 902 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 UBTFL1P0CB47 393 aaPredicted RBP21.14■□□□□ 0.97
SREBF1-218ENST00000578469 FAM161AQ3B820 660 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 BEND3Q5T5X7 828 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 BACH2Q9BYV9 841 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 HDAC5Q9UQL6 1122 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 MAP3K2Q9Y2U5 619 aa21.14■□□□□ 0.97
SREBF1-218ENST00000578469 MYL6BP14649 208 aa21.13■□□□□ 0.97
SREBF1-218ENST00000578469 ZBTB47Q9UFB7 747 aaPredicted RBP21.13■□□□□ 0.97
SREBF1-218ENST00000578469 AIMP1Q12904 312 aaKnown RBP21.12■□□□□ 0.97
SREBF1-218ENST00000578469 ANKRD45Q5TZF3 282 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 RIC3Q7Z5B4 369 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 TEX13AQ9BXU3 409 aaPredicted RBP21.12■□□□□ 0.97
SREBF1-218ENST00000578469 DCTPP1Q9H773 170 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 KCPQ6ZWJ8 1503 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 LAMB4A4D0S4 1761 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 UBR2Q8IWV8 1755 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 TOGARAM1Q9Y4F4 1720 aa21.12■□□□□ 0.97
SREBF1-218ENST00000578469 PTCD1O75127 700 aaKnown RBP21.11■□□□□ 0.97
SREBF1-218ENST00000578469 COL23A1Q86Y22 540 aaPredicted RBP21.11■□□□□ 0.97
SREBF1-218ENST00000578469 FLAD1Q8NFF5 587 aa21.11■□□□□ 0.97
SREBF1-218ENST00000578469 XAGE3Q8WTP9 111 aa21.11■□□□□ 0.97
SREBF1-218ENST00000578469 PIGBQ92521 554 aa21.11■□□□□ 0.97
SREBF1-218ENST00000578469 USP44Q9H0E7 712 aa21.11■□□□□ 0.97
SREBF1-218ENST00000578469 YBX3P16989 372 aaKnown RBP eCLIP21.1■□□□□ 0.974e-8■■□□□ 14.1
SREBF1-218ENST00000578469 NEXNQ0ZGT2 675 aa21.1■□□□□ 0.97
SREBF1-218ENST00000578469 MSL1Q68DK7 614 aa21.1■□□□□ 0.97
SREBF1-218ENST00000578469 COPS6Q7L5N1 327 aa21.1■□□□□ 0.97
SREBF1-218ENST00000578469 VSIG10Q8N0Z9 540 aa21.1■□□□□ 0.97
SREBF1-218ENST00000578469 LINS1Q8NG48 757 aa21.1■□□□□ 0.97
SREBF1-218ENST00000578469 ATP8B2P98198 1209 aa21.09■□□□□ 0.97
SREBF1-218ENST00000578469 ANKRD13DQ6ZTN6 518 aa21.08■□□□□ 0.97
SREBF1-218ENST00000578469 LNPKQ9C0E8 428 aa21.08■□□□□ 0.97
SREBF1-218ENST00000578469 ATG3Q9NT62 314 aa21.08■□□□□ 0.97
SREBF1-218ENST00000578469 C9orf78Q9NZ63 289 aaPredicted RBP21.07■□□□□ 0.96
SREBF1-218ENST00000578469 CD2APQ9Y5K6 639 aa21.07■□□□□ 0.96
SREBF1-218ENST00000578469 LRRFIP2Q9Y608 721 aaKnown RBP21.07■□□□□ 0.96
SREBF1-218ENST00000578469 PALLDQ8WX93 1383 aa21.07■□□□□ 0.96
SREBF1-218ENST00000578469 ASAP1Q9ULH1 1129 aa21.06■□□□□ 0.96
SREBF1-218ENST00000578469 IBTKQ9P2D0 1353 aaPredicted RBP21.06■□□□□ 0.96
SREBF1-218ENST00000578469 CEP350Q5VT06 3117 aa21.05■□□□□ 0.96
SREBF1-218ENST00000578469 LRP10Q7Z4F1 713 aa21.05■□□□□ 0.96
SREBF1-218ENST00000578469 METTL22Q9BUU2 404 aaPredicted RBP21.05■□□□□ 0.96
SREBF1-218ENST00000578469 ITGB4P16144 1822 aa21.05■□□□□ 0.96
SREBF1-218ENST00000578469 STARD3NLO95772 234 aa21.04■□□□□ 0.96
SREBF1-218ENST00000578469 PLBD2Q8NHP8 589 aa21.04■□□□□ 0.96
SREBF1-218ENST00000578469 AK7Q96M32 723 aa21.04■□□□□ 0.96
SREBF1-218ENST00000578469 RBM42Q9BTD8 480 aaKnown RBP21.04■□□□□ 0.96
SREBF1-218ENST00000578469 GPBP1L1Q9HC44 474 aaPredicted RBP21.04■□□□□ 0.96
SREBF1-218ENST00000578469 C8orf34Q49A92 452 aa21.03■□□□□ 0.96
SREBF1-218ENST00000578469 SMARCC1Q92922 1105 aaPredicted RBP21.03■□□□□ 0.96
SREBF1-218ENST00000578469 TAF1LQ8IZX4 1826 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 NBPF26B4DH59 902 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 A1BGP04217 495 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 NBPF10Q6P3W6 841 aaKnown RBP21.02■□□□□ 0.96
SREBF1-218ENST00000578469 NBPF15Q8N660 670 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 MYD88Q99836 296 aa21.02■□□□□ 0.96
SREBF1-218ENST00000578469 GRM8O00222 908 aa21.01■□□□□ 0.95
SREBF1-218ENST00000578469 NBPF7P0C2Y1 421 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-218ENST00000578469 PIP4K2AP48426 406 aaPredicted RBP21.01■□□□□ 0.95
SREBF1-218ENST00000578469 C4BP0C0L5 1744 aa21.01■□□□□ 0.95
SREBF1-218ENST00000578469 CWF19L2Q2TBE0 894 aaKnown RBP21■□□□□ 0.95
SREBF1-218ENST00000578469 DNAJC10Q8IXB1 793 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms