RNA–Protein interactions for RNA: ENST00000578415.1

TSEN54-205, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 994 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-205ENST00000578415 BCORQ6W2J9 1755 aa28.12■■■□□ 2.09
TSEN54-205ENST00000578415 ST5P78524 1137 aa28.12■■■□□ 2.09
TSEN54-205ENST00000578415 PRPF40BQ6NWY9 871 aaKnown RBP28.12■■■□□ 2.09
TSEN54-205ENST00000578415 CNKSR1Q969H4 720 aa28.12■■■□□ 2.09
TSEN54-205ENST00000578415 TAOK3Q9H2K8 898 aa28.12■■■□□ 2.09
TSEN54-205ENST00000578415 NPHP1O15259 732 aa28.11■■■□□ 2.09
TSEN54-205ENST00000578415 PCNTO95613 3336 aa28.09■■■□□ 2.09
TSEN54-205ENST00000578415 SLX4Q8IY92 1834 aa28.09■■■□□ 2.09
TSEN54-205ENST00000578415 MCM10Q7L590 875 aa28.09■■■□□ 2.09
TSEN54-205ENST00000578415 MASTLQ96GX5 879 aa28.09■■■□□ 2.09
TSEN54-205ENST00000578415 SNRPA1P09661 255 aaKnown RBP28.08■■■□□ 2.09
TSEN54-205ENST00000578415 CLEC4GQ6UXB4 293 aa28.08■■■□□ 2.09
TSEN54-205ENST00000578415 NUDCQ9Y266 331 aa28.08■■■□□ 2.09
TSEN54-205ENST00000578415 U2AF1L5P0DN76 240 aaPredicted RBP28.07■■■□□ 2.08
TSEN54-205ENST00000578415 U2AF1Q01081 240 aaKnown RBP eCLIP28.07■■■□□ 2.08
TSEN54-205ENST00000578415 DICER1Q9UPY3 1922 aaKnown RBP28.07■■■□□ 2.08
TSEN54-205ENST00000578415 NBPF5PQ86XG9 351 aaPredicted RBP28.06■■■□□ 2.08
TSEN54-205ENST00000578415 C7orf43Q8WVR3 580 aa28.06■■■□□ 2.08
TSEN54-205ENST00000578415 RTF1Q92541 710 aaKnown RBP28.06■■■□□ 2.08
TSEN54-205ENST00000578415 NBPF26B4DH59 902 aa28.05■■■□□ 2.08
TSEN54-205ENST00000578415 DDNO94850 711 aaPredicted RBP28.05■■■□□ 2.08
TSEN54-205ENST00000578415 PPP2R1AP30153 589 aa28.05■■■□□ 2.08
TSEN54-205ENST00000578415 DCTN1Q14203 1278 aa28.05■■■□□ 2.08
TSEN54-205ENST00000578415 SOGA3Q5TF21 947 aa28.05■■■□□ 2.08
TSEN54-205ENST00000578415 NBPF10Q6P3W6 841 aaKnown RBP28.05■■■□□ 2.08
TSEN54-205ENST00000578415 NBPF15Q8N660 670 aa28.05■■■□□ 2.08
TSEN54-205ENST00000578415 POTEIP0CG38 1075 aa28.04■■■□□ 2.08
TSEN54-205ENST00000578415 POTEJP0CG39 1038 aa28.04■■■□□ 2.08
TSEN54-205ENST00000578415 ZNF652Q9Y2D9 606 aa28.04■■■□□ 2.08
TSEN54-205ENST00000578415 ARFGEF2Q9Y6D5 1785 aa28.03■■■□□ 2.08
TSEN54-205ENST00000578415 KLRG2A4D1S0 409 aaPredicted RBP28.02■■■□□ 2.08
TSEN54-205ENST00000578415 HSPA1AP0DMV8 641 aaKnown RBP28.02■■■□□ 2.08
TSEN54-205ENST00000578415 HSPA1BP0DMV9 641 aaKnown RBP28.02■■■□□ 2.08
TSEN54-205ENST00000578415 CHADLQ6NUI6 762 aa28.02■■■□□ 2.08
TSEN54-205ENST00000578415 NPR1P16066 1061 aa28.01■■■□□ 2.07
TSEN54-205ENST00000578415 CACNA1SQ13698 1873 aa28■■■□□ 2.07
TSEN54-205ENST00000578415 RGL2O15211 777 aa28■■■□□ 2.07
TSEN54-205ENST00000578415 HTATSF1O43719 755 aaKnown RBP28■■■□□ 2.07
TSEN54-205ENST00000578415 NIP7Q9Y221 180 aaKnown RBP eCLIP28■■■□□ 2.07
TSEN54-205ENST00000578415 CCDC93Q567U6 631 aa27.99■■■□□ 2.07
TSEN54-205ENST00000578415 TPTE2Q6XPS3 522 aa27.98■■■□□ 2.07
TSEN54-205ENST00000578415 TNS4Q8IZW8 715 aa27.98■■■□□ 2.07
TSEN54-205ENST00000578415 HLFQ16534 295 aa27.97■■■□□ 2.07
TSEN54-205ENST00000578415 OLFM4Q6UX06 510 aa27.97■■■□□ 2.07
TSEN54-205ENST00000578415 L3MBTL3Q96JM7 780 aaPredicted RBP27.97■■■□□ 2.07
TSEN54-205ENST00000578415 CREBZFQ9NS37 354 aa27.97■■■□□ 2.07
TSEN54-205ENST00000578415 TAF7Q15545 349 aaPredicted RBP27.96■■■□□ 2.07
TSEN54-205ENST00000578415 MIS18AQ9NYP9 233 aa27.96■■■□□ 2.07
TSEN54-205ENST00000578415 FAM177BA6PVY3 158 aa27.95■■■□□ 2.06
TSEN54-205ENST00000578415 FKBP4Q02790 459 aaKnown RBP eCLIP27.95■■■□□ 2.06
TSEN54-205ENST00000578415 ZNF277Q9NRM2 450 aaPredicted RBP27.95■■■□□ 2.06
TSEN54-205ENST00000578415 IQCA1LA6NCM1 817 aa27.94■■■□□ 2.06
TSEN54-205ENST00000578415 TAF1DQ9H5J8 278 aaPredicted RBP27.94■■■□□ 2.06
TSEN54-205ENST00000578415 ZNF541Q9H0D2 1346 aa27.93■■■□□ 2.06
TSEN54-205ENST00000578415 MKRN1Q9UHC7 482 aaKnown RBP27.93■■■□□ 2.06
TSEN54-205ENST00000578415 CAPN15O75808 1086 aa27.92■■■□□ 2.06
TSEN54-205ENST00000578415 LDHDQ86WU2 507 aa27.92■■■□□ 2.06
TSEN54-205ENST00000578415 PASKQ96RG2 1323 aa27.92■■■□□ 2.06
TSEN54-205ENST00000578415 RTKN2Q8IZC4 609 aa27.9■■■□□ 2.06
TSEN54-205ENST00000578415 ABCC12Q96J65 1359 aa27.89■■■□□ 2.06
TSEN54-205ENST00000578415 SNED1Q8TER0 1413 aa27.89■■■□□ 2.06
TSEN54-205ENST00000578415 ALDH1B1P30837 517 aa27.88■■■□□ 2.05
TSEN54-205ENST00000578415 LAMB4A4D0S4 1761 aa27.88■■■□□ 2.05
TSEN54-205ENST00000578415 SCN4AP35499 1836 aa27.88■■■□□ 2.05
TSEN54-205ENST00000578415 GTF2E1P29083 439 aaPredicted RBP27.87■■■□□ 2.05
TSEN54-205ENST00000578415 CRY2Q49AN0 593 aa27.87■■■□□ 2.05
TSEN54-205ENST00000578415 NGEFQ8N5V2 710 aa27.87■■■□□ 2.05
TSEN54-205ENST00000578415 CNTNAP1P78357 1384 aa27.86■■■□□ 2.05
TSEN54-205ENST00000578415 ERVV-1B6SEH8 477 aa27.86■■■□□ 2.05
TSEN54-205ENST00000578415 IARSP41252 1262 aaKnown RBP27.86■■■□□ 2.05
TSEN54-205ENST00000578415 NUTM1Q86Y26 1132 aa27.86■■■□□ 2.05
TSEN54-205ENST00000578415 SYNE4Q8N205 404 aa27.86■■■□□ 2.05
TSEN54-205ENST00000578415 FZD9O00144 591 aa27.85■■■□□ 2.05
TSEN54-205ENST00000578415 ITGBL1O95965 494 aaPredicted RBP27.85■■■□□ 2.05
TSEN54-205ENST00000578415 PNISRQ8TF01 805 aaKnown RBP27.85■■■□□ 2.05
TSEN54-205ENST00000578415 HACL1Q9UJ83 578 aa27.85■■■□□ 2.05
TSEN54-205ENST00000578415 MAP3K15Q6ZN16 1313 aa27.85■■■□□ 2.05
TSEN54-205ENST00000578415 EIF4A1P60842 406 aaKnown RBP27.84■■■□□ 2.05
TSEN54-205ENST00000578415 EAPPQ56P03 285 aaPredicted RBP27.84■■■□□ 2.05
TSEN54-205ENST00000578415 TTLL7Q6ZT98 887 aa27.84■■■□□ 2.05
TSEN54-205ENST00000578415 PLEKHF1Q96S99 279 aa27.84■■■□□ 2.05
TSEN54-205ENST00000578415 KDM3BQ7LBC6 1761 aa27.83■■■□□ 2.05
TSEN54-205ENST00000578415 EPHX2P34913 555 aa27.83■■■□□ 2.05
TSEN54-205ENST00000578415 THUMPD2Q9BTF0 503 aaKnown RBP27.83■■■□□ 2.05
TSEN54-205ENST00000578415 NYXQ9GZU5 481 aa27.83■■■□□ 2.05
TSEN54-205ENST00000578415 PSMD1Q99460 953 aa27.82■■■□□ 2.04
TSEN54-205ENST00000578415 RRP7AQ9Y3A4 280 aaKnown RBP27.82■■■□□ 2.04
TSEN54-205ENST00000578415 RNF123Q5XPI4 1314 aa27.82■■■□□ 2.04
TSEN54-205ENST00000578415 UBN2Q6ZU65 1347 aa27.82■■■□□ 2.04
TSEN54-205ENST00000578415 ADAMTSL1Q8N6G6 1762 aa27.81■■■□□ 2.04
TSEN54-205ENST00000578415 TMEM88BA6NKF7 163 aa27.8■■■□□ 2.04
TSEN54-205ENST00000578415 NEFMP07197 916 aa27.8■■■□□ 2.04
TSEN54-205ENST00000578415 IBTKQ9P2D0 1353 aaPredicted RBP27.8■■■□□ 2.04
TSEN54-205ENST00000578415 COL4A5P29400 1685 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 RIC1Q4ADV7 1423 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 MYL6BP14649 208 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 GPTP24298 496 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 HOXA10P31260 410 aaPredicted RBP27.79■■■□□ 2.04
TSEN54-205ENST00000578415 NFE2L2Q16236 605 aa27.79■■■□□ 2.04
TSEN54-205ENST00000578415 KIF6Q6ZMV9 814 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms