RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 AMIGO3Q86WK7 504 aa17.69■□□□□ 0.42
LINC01543-201ENST00000578367 PHAXQ9H814 394 aaKnown RBP17.69■□□□□ 0.42
LINC01543-201ENST00000578367 UBR3Q6ZT12 1888 aa17.68■□□□□ 0.42
LINC01543-201ENST00000578367 TTLL7Q6ZT98 887 aa17.68■□□□□ 0.42
LINC01543-201ENST00000578367 TBC1D2BQ9UPU7 963 aa17.68■□□□□ 0.42
LINC01543-201ENST00000578367 GYS1P13807 737 aa17.67■□□□□ 0.42
LINC01543-201ENST00000578367 FKBP5Q13451 457 aaPredicted RBP17.67■□□□□ 0.42
LINC01543-201ENST00000578367 API5Q9BZZ5 524 aaKnown RBP17.67■□□□□ 0.42
LINC01543-201ENST00000578367 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
LINC01543-201ENST00000578367 MSH5O43196 834 aa17.66■□□□□ 0.42
LINC01543-201ENST00000578367 AIMP1Q12904 312 aaKnown RBP17.66■□□□□ 0.42
LINC01543-201ENST00000578367 TRIM28Q13263 835 aaKnown RBP17.66■□□□□ 0.42
LINC01543-201ENST00000578367 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
LINC01543-201ENST00000578367 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
LINC01543-201ENST00000578367 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.66■□□□□ 0.42
LINC01543-201ENST00000578367 ARXQ96QS3 562 aa17.66■□□□□ 0.42
LINC01543-201ENST00000578367 MTFR1LQ9H019 292 aa17.66■□□□□ 0.42
LINC01543-201ENST00000578367 IBTKQ9P2D0 1353 aaPredicted RBP17.66■□□□□ 0.42
LINC01543-201ENST00000578367 ATP10DQ9P241 1426 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 MS4A1P11836 297 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 G2E3Q7L622 706 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 BCL2L12Q9HB09 334 aa17.65■□□□□ 0.42
LINC01543-201ENST00000578367 CACNA1FO60840 1977 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 NEXNQ0ZGT2 675 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 TCIRG1Q13488 830 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 PARP10Q53GL7 1025 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 DNAAF4Q8WXU2 420 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 METTL22Q9BUU2 404 aaPredicted RBP17.64■□□□□ 0.41
LINC01543-201ENST00000578367 BCL2L13Q9BXK5 485 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 ZBTB3Q9H5J0 574 aa17.64■□□□□ 0.41
LINC01543-201ENST00000578367 SRP68Q9UHB9 627 aaKnown RBP17.64■□□□□ 0.41
LINC01543-201ENST00000578367 NOB1Q9ULX3 412 aaKnown RBP17.64■□□□□ 0.41
LINC01543-201ENST00000578367 BCAR3O75815 825 aa17.63■□□□□ 0.41
LINC01543-201ENST00000578367 ZKSCAN2Q63HK3 967 aa17.63■□□□□ 0.41
LINC01543-201ENST00000578367 TM4SF1P30408 202 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 ATF7IPQ6VMQ6 1270 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 SMIM5Q71RC9 77 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 ZNF34Q8IZ26 560 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 RNF123Q5XPI4 1314 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 ADCY9O60503 1353 aa17.62■□□□□ 0.41
LINC01543-201ENST00000578367 FKBP8Q14318 412 aa17.61■□□□□ 0.41
LINC01543-201ENST00000578367 HLFQ16534 295 aa17.61■□□□□ 0.41
LINC01543-201ENST00000578367 CCDC191Q8NCU4 936 aa17.61■□□□□ 0.41
LINC01543-201ENST00000578367 LINS1Q8NG48 757 aa17.61■□□□□ 0.41
LINC01543-201ENST00000578367 ISCA1Q9BUE6 129 aa17.61■□□□□ 0.41
LINC01543-201ENST00000578367 PSDA5PKW4 1024 aaPredicted RBP17.6■□□□□ 0.41
LINC01543-201ENST00000578367 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
LINC01543-201ENST00000578367 POLD1P28340 1107 aa17.6■□□□□ 0.41
LINC01543-201ENST00000578367 NIP7Q9Y221 180 aaKnown RBP eCLIP17.6■□□□□ 0.41
LINC01543-201ENST00000578367 CARMIL3Q8ND23 1372 aa17.6■□□□□ 0.41
LINC01543-201ENST00000578367 PXDNLA1KZ92 1463 aa17.6■□□□□ 0.41
LINC01543-201ENST00000578367 ALDH1L1O75891 902 aa17.59■□□□□ 0.41
LINC01543-201ENST00000578367 CCT4P50991 539 aaKnown RBP17.59■□□□□ 0.41
LINC01543-201ENST00000578367 NFIXQ14938 502 aa17.59■□□□□ 0.41
LINC01543-201ENST00000578367 PPP1R42Q7Z4L9 355 aa17.59■□□□□ 0.41
LINC01543-201ENST00000578367 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
LINC01543-201ENST00000578367 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
LINC01543-201ENST00000578367 SCN7AQ01118 1682 aa17.58■□□□□ 0.41
LINC01543-201ENST00000578367 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
LINC01543-201ENST00000578367 BEND3Q5T5X7 828 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 TBC1D9BQ66K14 1250 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 FRAT1Q92837 279 aaPredicted RBP17.58■□□□□ 0.4
LINC01543-201ENST00000578367 PDGFDQ9GZP0 370 aaPredicted RBP17.58■□□□□ 0.4
LINC01543-201ENST00000578367 PARP3Q9Y6F1 533 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 TUBGCP6Q96RT7 1819 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 CASZ1Q86V15 1759 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 C4AP0C0L4 1744 aa17.58■□□□□ 0.4
LINC01543-201ENST00000578367 ABCC4O15439 1325 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 TRIM27P14373 513 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 PDE3AQ14432 1141 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 TPTE2Q6XPS3 522 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 MYD88Q99836 296 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 SRCIN1Q9C0H9 1055 aa17.57■□□□□ 0.4
LINC01543-201ENST00000578367 POLRMTO00411 1230 aaKnown RBP17.56■□□□□ 0.4
LINC01543-201ENST00000578367 ZBTB7AO95365 584 aa17.56■□□□□ 0.4
LINC01543-201ENST00000578367 MMP10P09238 476 aa17.56■□□□□ 0.4
LINC01543-201ENST00000578367 INTS3Q68E01 1043 aaKnown RBP17.56■□□□□ 0.4
LINC01543-201ENST00000578367 NLRP10Q86W26 655 aa17.56■□□□□ 0.4
LINC01543-201ENST00000578367 SGIP1Q9BQI5 828 aa17.56■□□□□ 0.4
LINC01543-201ENST00000578367 CWC25Q9NXE8 425 aaPredicted RBP17.56■□□□□ 0.4
LINC01543-201ENST00000578367 BCORQ6W2J9 1755 aa17.56■□□□□ 0.4
LINC01543-201ENST00000578367 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
LINC01543-201ENST00000578367 F6X3S4 739 aa17.55■□□□□ 0.4
LINC01543-201ENST00000578367 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
LINC01543-201ENST00000578367 FTSJ3Q8IY81 847 aaKnown RBP17.55■□□□□ 0.4
LINC01543-201ENST00000578367 DZIP1LQ8IYY4 767 aaKnown RBP17.55■□□□□ 0.4
LINC01543-201ENST00000578367 UTP14AQ9BVJ6 771 aaKnown RBP17.55■□□□□ 0.4
LINC01543-201ENST00000578367 SERPINB2P05120 415 aa17.54■□□□□ 0.4
LINC01543-201ENST00000578367 SLC4A10Q6U841 1118 aa17.54■□□□□ 0.4
LINC01543-201ENST00000578367 NBPF5PQ86XG9 351 aaPredicted RBP17.54■□□□□ 0.4
LINC01543-201ENST00000578367 HDAC5Q9UQL6 1122 aa17.54■□□□□ 0.4
LINC01543-201ENST00000578367 UBN2Q6ZU65 1347 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 PCCAP05165 728 aaPredicted RBP17.53■□□□□ 0.4
LINC01543-201ENST00000578367 GPTP24298 496 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 PTGER2P43116 358 aa17.53■□□□□ 0.4
LINC01543-201ENST00000578367 RRP1P56182 461 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms