RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 POLRMTO00411 1230 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 CHPF2Q9P2E5 772 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 MAP3K15Q6ZN16 1313 aa16.37■□□□□ 0.21
CSNK1D-207ENST00000578194 PROSER3Q2NL68 480 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 TBC1D9BQ66K14 1250 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 TTLL7Q6ZT98 887 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 SETDB2Q96T68 719 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 HYPKQ9NX55 129 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 CARMIL3Q8ND23 1372 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 C10orf71Q711Q0 1435 aa16.36■□□□□ 0.21
CSNK1D-207ENST00000578194 E9PSI1 815 aa16.35■□□□□ 0.21
CSNK1D-207ENST00000578194 ANXA1P04083 346 aa16.35■□□□□ 0.21
CSNK1D-207ENST00000578194 SERPINB2P05120 415 aa16.35■□□□□ 0.21
CSNK1D-207ENST00000578194 LRP10Q7Z4F1 713 aa16.35■□□□□ 0.21
CSNK1D-207ENST00000578194 ANKRD36CQ5JPF3 1778 aa16.35■□□□□ 0.21
CSNK1D-207ENST00000578194 EXOSC9Q06265 439 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 TSPYL6Q8N831 410 aa16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 ZBTB3Q9H5J0 574 aa16.34■□□□□ 0.21
CSNK1D-207ENST00000578194 NPHP1O15259 732 aa16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 AIMP1Q12904 312 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 NLGN2Q8NFZ4 835 aa16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 SPINK5Q9NQ38 1064 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 NIP7Q9Y221 180 aaKnown RBP eCLIP16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 ATP10DQ9P241 1426 aa16.33■□□□□ 0.2
CSNK1D-207ENST00000578194 TGFB2P61812 414 aa16.32■□□□□ 0.2
CSNK1D-207ENST00000578194 HLFQ16534 295 aa16.32■□□□□ 0.2
CSNK1D-207ENST00000578194 HSP90AB3PQ58FF7 597 aa16.32■□□□□ 0.2
CSNK1D-207ENST00000578194 GIGYF2Q6Y7W6 1299 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-207ENST00000578194 N4BP2Q86UW6 1770 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-207ENST00000578194 KIAA1551Q9HCM1 1747 aa16.31■□□□□ 0.2
CSNK1D-207ENST00000578194 NBPF5PQ86XG9 351 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-207ENST00000578194 CNBD1Q8NA66 436 aa16.31■□□□□ 0.2
CSNK1D-207ENST00000578194 ARFGEF2Q9Y6D5 1785 aa16.31■□□□□ 0.2
CSNK1D-207ENST00000578194 ST5P78524 1137 aa16.3■□□□□ 0.2
CSNK1D-207ENST00000578194 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.23e-18■□□□□ 9.1
CSNK1D-207ENST00000578194 SLFN5Q08AF3 891 aa16.3■□□□□ 0.2
CSNK1D-207ENST00000578194 PLBD2Q8NHP8 589 aa16.3■□□□□ 0.2
CSNK1D-207ENST00000578194 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 VAMP4O75379 141 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 TPTE2Q6XPS3 522 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 ANKRD13DQ6ZTN6 518 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 NYXQ9GZU5 481 aa16.29■□□□□ 0.2
CSNK1D-207ENST00000578194 DLEC1Q9Y238 1755 aa16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 IBTKQ9P2D0 1353 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 PARP10Q53GL7 1025 aa16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 ZNF34Q8IZ26 560 aa16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 BRCA1P38398 1863 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-207ENST00000578194 TCERG1O14776 1098 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 GPTP24298 496 aa16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 GTF2E1P29083 439 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 GPR162Q16538 588 aa16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 BRIP1Q9BX63 1249 aa16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 PDZRN3Q9UPQ7 1066 aa16.27■□□□□ 0.2
CSNK1D-207ENST00000578194 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 SLC4A2P04920 1241 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 DPEP1P16444 411 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 PDE6BP35913 854 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 PPP1R42Q7Z4L9 355 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 CDCA7LQ96GN5 454 aa16.26■□□□□ 0.19
CSNK1D-207ENST00000578194 RNF123Q5XPI4 1314 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 UBN2Q6ZU65 1347 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 H0YIN7 160 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 C2CD5Q86YS7 1000 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 TRMT2AQ8IZ69 625 aaKnown RBP16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 ZNF428Q96B54 188 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 PIM2Q9P1W9 311 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 ARFGEF1Q9Y6D6 1849 aa16.24■□□□□ 0.19
CSNK1D-207ENST00000578194 COL11A2P13942 1736 aaPredicted RBP16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 GRIN3BO60391 1043 aa16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 SUSD4Q5VX71 490 aa16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 KSR2Q6VAB6 950 aa16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 CCDC24Q8N4L8 307 aa16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
CSNK1D-207ENST00000578194 RIC1Q4ADV7 1423 aa16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 NTSR2O95665 410 aa16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 CT47B1P0C2W7 299 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 CHRNA5P30532 468 aa16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 FLIIQ13045 1269 aa16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 NLRP10Q86W26 655 aa16.22■□□□□ 0.19
CSNK1D-207ENST00000578194 ZBED9Q6R2W3 1325 aa16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 CHD4Q14839 1912 aa16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 NEXNQ0ZGT2 675 aa16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 DALRD3Q5D0E6 543 aaKnown RBP16.21■□□□□ 0.19
CSNK1D-207ENST00000578194 G2E3Q7L622 706 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms