RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 SRGNP10124 158 aa15□□□□□ -0.01
SMARCE1-214ENST00000578112 ZNF622Q969S3 477 aaKnown RBP eCLIP15□□□□□ -0.018e-14■■■□□ 17.5
SMARCE1-214ENST00000578112 NPR1P16066 1061 aa15□□□□□ -0.01
SMARCE1-214ENST00000578112 PRKAR2BP31323 418 aa15□□□□□ -0.01
SMARCE1-214ENST00000578112 L3MBTL3Q96JM7 780 aaPredicted RBP15□□□□□ -0.01
SMARCE1-214ENST00000578112 ERFEQ4G0M1 354 aa14.99□□□□□ -0.01
SMARCE1-214ENST00000578112 CCDC93Q567U6 631 aa14.99□□□□□ -0.01
SMARCE1-214ENST00000578112 BICDL1Q6ZP65 573 aa14.99□□□□□ -0.01
SMARCE1-214ENST00000578112 TBC1D2BQ9UPU7 963 aa14.99□□□□□ -0.01
SMARCE1-214ENST00000578112 KDM3BQ7LBC6 1761 aa14.99□□□□□ -0.01
SMARCE1-214ENST00000578112 SLX4Q8IY92 1834 aa14.98□□□□□ -0.01
SMARCE1-214ENST00000578112 CHADLQ6NUI6 762 aa14.98□□□□□ -0.01
SMARCE1-214ENST00000578112 POTECB2RU33 542 aa14.98□□□□□ -0.01
SMARCE1-214ENST00000578112 CC2D2BQ6DHV5 1058 aa14.98□□□□□ -0.01
SMARCE1-214ENST00000578112 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
SMARCE1-214ENST00000578112 C21orf2O43822 256 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 A1BGP04217 495 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 PRPF40BQ6NWY9 871 aaKnown RBP14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 TPTE2Q6XPS3 522 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 RTKN2Q8IZC4 609 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 NPHP1O15259 732 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 PRKCSHP14314 528 aaPredicted RBP14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 C7orf43Q8WVR3 580 aa14.97□□□□□ -0.01
SMARCE1-214ENST00000578112 ALDH1B1P30837 517 aa14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 FKBP4Q02790 459 aaKnown RBP eCLIP14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 NBPF5PQ86XG9 351 aaPredicted RBP14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 NYXQ9GZU5 481 aa14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 PNNQ9H307 717 aaKnown RBP14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 CACNA1SQ13698 1873 aa14.96□□□□□ -0.01
SMARCE1-214ENST00000578112 ERVV-1B6SEH8 477 aa14.96□□□□□ -0.02
SMARCE1-214ENST00000578112 LDHDQ86WU2 507 aa14.96□□□□□ -0.02
SMARCE1-214ENST00000578112 PHACTR3Q96KR7 559 aa14.96□□□□□ -0.02
SMARCE1-214ENST00000578112 ADAMTSL1Q8N6G6 1762 aa14.95□□□□□ -0.02
SMARCE1-214ENST00000578112 NEFMP07197 916 aa14.95□□□□□ -0.02
SMARCE1-214ENST00000578112 PPP2R1AP30153 589 aa14.95□□□□□ -0.02
SMARCE1-214ENST00000578112 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
SMARCE1-214ENST00000578112 USP16Q9Y5T5 823 aa14.95□□□□□ -0.02
SMARCE1-214ENST00000578112 UTRNP46939 3433 aa14.94□□□□□ -0.02
SMARCE1-214ENST00000578112 DAXXQ9UER7 740 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 U2AF1L5P0DN76 240 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 U2AF1Q01081 240 aaKnown RBP eCLIP14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 PSMD1Q99460 953 aa14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 ZNF330Q9Y3S2 320 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-214ENST00000578112 PASKQ96RG2 1323 aa14.92□□□□□ -0.02
SMARCE1-214ENST00000578112 KCNQ3O43525 872 aa14.92□□□□□ -0.02
SMARCE1-214ENST00000578112 VPS33BQ9H267 617 aa14.92□□□□□ -0.02
SMARCE1-214ENST00000578112 BABAM1Q9NWV8 329 aa14.92□□□□□ -0.02
SMARCE1-214ENST00000578112 SNED1Q8TER0 1413 aa14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 RNF123Q5XPI4 1314 aa14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 CRY2Q49AN0 593 aa14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 PNMA8AQ86V59 439 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 NIP7Q9Y221 180 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 CNTNAP1P78357 1384 aa14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 HSPA1AP0DMV8 641 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 HSPA1BP0DMV9 641 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 DLG5Q8TDM6 1919 aa14.91□□□□□ -0.02
SMARCE1-214ENST00000578112 TNS4Q8IZW8 715 aa14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 NUP98P52948 1817 aa14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 TAF1DQ9H5J8 278 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-214ENST00000578112 FZD9O00144 591 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 HOXA10P31260 410 aaPredicted RBP14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 HTRA3P83110 453 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 HACL1Q9UJ83 578 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 MAP3K15Q6ZN16 1313 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 IARSP41252 1262 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 KIF6Q6ZMV9 814 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 PRDM10Q9NQV6 1147 aa14.89□□□□□ -0.03
SMARCE1-214ENST00000578112 DDNO94850 711 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 COL13A1Q5TAT6 717 aaPredicted RBP14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 MCM10Q7L590 875 aa14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 THSD7BQ9C0I4 1608 aa14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 GPC2Q8N158 579 aa14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 CRAMP1Q96RY5 1269 aa14.88□□□□□ -0.03
SMARCE1-214ENST00000578112 NFE2L2Q16236 605 aa14.87□□□□□ -0.03
SMARCE1-214ENST00000578112 PARP10Q53GL7 1025 aa14.87□□□□□ -0.03
SMARCE1-214ENST00000578112 TMEM88BA6NKF7 163 aa14.86□□□□□ -0.03
SMARCE1-214ENST00000578112 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
SMARCE1-214ENST00000578112 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 EIF4A1P60842 406 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 SYNE4Q8N205 404 aa14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 CCDC24Q8N4L8 307 aa14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 JDP2Q8WYK2 163 aa14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 RBM17Q96I25 401 aaKnown RBP14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
SMARCE1-214ENST00000578112 PRAMEF22A3QJZ6 481 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 EPHX2P34913 555 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 ANKRD36CQ5JPF3 1778 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 ITGBL1O95965 494 aaPredicted RBP14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 EIF6P56537 245 aaKnown RBP14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 PPP1R42Q7Z4L9 355 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 ZNF34Q8IZ26 560 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 ZNF541Q9H0D2 1346 aa14.84□□□□□ -0.03
SMARCE1-214ENST00000578112 RASSF10A6NK89 507 aa14.83□□□□□ -0.03
SMARCE1-214ENST00000578112 LMOD3Q0VAK6 560 aa14.83□□□□□ -0.03
SMARCE1-214ENST00000578112 HLFQ16534 295 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1095 ms