RNA–Protein interactions for RNA: ENST00000577940.6

DDX42-204, Transcript of DEAD-box helicase 42, humanhuman

TSL 5

Gene DDX42, Length 1,427 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-204ENST00000577940 PRR5LQ6MZQ0 368 aa10.96□□□□□ -0.65
DDX42-204ENST00000577940 ZNF622Q969S3 477 aaKnown RBP eCLIP10.96□□□□□ -0.651e-7■■□□□ 11.8
DDX42-204ENST00000577940 ADAMTS7Q9UKP4 1686 aa10.96□□□□□ -0.66
DDX42-204ENST00000577940 SCN11AQ9UI33 1791 aa10.96□□□□□ -0.66
DDX42-204ENST00000577940 CHD4Q14839 1912 aa10.96□□□□□ -0.66
DDX42-204ENST00000577940 PRAMEF22A3QJZ6 481 aa10.95□□□□□ -0.66
DDX42-204ENST00000577940 HSPA6P17066 643 aa10.95□□□□□ -0.66
DDX42-204ENST00000577940 TPTE2Q6XPS3 522 aa10.95□□□□□ -0.66
DDX42-204ENST00000577940 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
DDX42-204ENST00000577940 C16orf71Q8IYS4 520 aaPredicted RBP10.95□□□□□ -0.66
DDX42-204ENST00000577940 CNKSR1Q969H4 720 aa10.95□□□□□ -0.66
DDX42-204ENST00000577940 ZC3H4Q9UPT8 1303 aaKnown RBP10.95□□□□□ -0.66
DDX42-204ENST00000577940 NBPF26B4DH59 902 aa10.94□□□□□ -0.66
DDX42-204ENST00000577940 PIP4K2AP48426 406 aaPredicted RBP10.94□□□□□ -0.66
DDX42-204ENST00000577940 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
DDX42-204ENST00000577940 SOGA3Q5TF21 947 aa10.94□□□□□ -0.66
DDX42-204ENST00000577940 NBPF10Q6P3W6 841 aaKnown RBP10.94□□□□□ -0.66
DDX42-204ENST00000577940 NBPF15Q8N660 670 aa10.94□□□□□ -0.66
DDX42-204ENST00000577940 MYH14Q7Z406 1995 aaKnown RBP10.94□□□□□ -0.66
DDX42-204ENST00000577940 TJP1Q07157 1748 aa10.94□□□□□ -0.66
DDX42-204ENST00000577940 HAX1O00165 279 aa10.93□□□□□ -0.66
DDX42-204ENST00000577940 GTF2E1P29083 439 aaPredicted RBP10.93□□□□□ -0.66
DDX42-204ENST00000577940 RIPK4P57078 832 aa10.93□□□□□ -0.66
DDX42-204ENST00000577940 EIF4A1P60842 406 aaKnown RBP10.93□□□□□ -0.66
DDX42-204ENST00000577940 STYK1Q6J9G0 422 aa10.93□□□□□ -0.66
DDX42-204ENST00000577940 MASTLQ96GX5 879 aa10.93□□□□□ -0.66
DDX42-204ENST00000577940 BABAM1Q9NWV8 329 aa10.93□□□□□ -0.66
DDX42-204ENST00000577940 NIP7Q9Y221 180 aaKnown RBP eCLIP10.93□□□□□ -0.66
DDX42-204ENST00000577940 ERVV-1B6SEH8 477 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 CCDC24Q8N4L8 307 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 NMRK2Q9NPI5 230 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 C21orf2O43822 256 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 SRGNP10124 158 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 DPY19L2Q6NUT2 758 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 KIF6Q6ZMV9 814 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
DDX42-204ENST00000577940 THUMPD2Q9BTF0 503 aaKnown RBP10.92□□□□□ -0.66
DDX42-204ENST00000577940 TSPYL4Q9UJ04 414 aa10.92□□□□□ -0.66
DDX42-204ENST00000577940 RRP7AQ9Y3A4 280 aaKnown RBP10.92□□□□□ -0.66
DDX42-204ENST00000577940 KLRG2A4D1S0 409 aaPredicted RBP10.91□□□□□ -0.66
DDX42-204ENST00000577940 NPR1P16066 1061 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 APLP1P51693 650 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 FSTL1Q12841 308 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 WDR43Q15061 677 aaKnown RBP eCLIP10.91□□□□□ -0.66
DDX42-204ENST00000577940 REM2Q8IYK8 340 aaPredicted RBP10.91□□□□□ -0.66
DDX42-204ENST00000577940 FAM9BQ8IZU0 186 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 NGEFQ8N5V2 710 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 NYXQ9GZU5 481 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 RRAGCQ9HB90 399 aa10.91□□□□□ -0.66
DDX42-204ENST00000577940 ERBB4Q15303 1308 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 GLTPD2A6NH11 291 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 NFKBIEO00221 500 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
DDX42-204ENST00000577940 ALDH1B1P30837 517 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 TMPOP42166 694 aaKnown RBP10.9□□□□□ -0.66
DDX42-204ENST00000577940 RASSF7Q02833 373 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 TAOK3Q9H2K8 898 aa10.9□□□□□ -0.66
DDX42-204ENST00000577940 KIF13BQ9NQT8 1826 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 MYL6BP14649 208 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 VEGFAP15692 232 aaPredicted RBP10.89□□□□□ -0.67
DDX42-204ENST00000577940 HLFQ16534 295 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 CCDC184Q52MB2 194 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 PRPF40BQ6NWY9 871 aaKnown RBP10.89□□□□□ -0.67
DDX42-204ENST00000577940 RUNDC1Q96C34 613 aa10.89□□□□□ -0.67
DDX42-204ENST00000577940 YTHDC1Q96MU7 727 aaKnown RBP10.89□□□□□ -0.67
DDX42-204ENST00000577940 MAP3K15Q6ZN16 1313 aa10.88□□□□□ -0.67
DDX42-204ENST00000577940 LTBP3Q9NS15 1303 aa10.88□□□□□ -0.67
DDX42-204ENST00000577940 FAM177BA6PVY3 158 aa10.88□□□□□ -0.67
DDX42-204ENST00000577940 RTKN2Q8IZC4 609 aa10.88□□□□□ -0.67
DDX42-204ENST00000577940 UBR2Q8IWV8 1755 aa10.87□□□□□ -0.67
DDX42-204ENST00000577940 EIF2S2P20042 333 aaKnown RBP10.87□□□□□ -0.67
DDX42-204ENST00000577940 NEUROD2Q15784 382 aa10.87□□□□□ -0.67
DDX42-204ENST00000577940 CCDC93Q567U6 631 aa10.87□□□□□ -0.67
DDX42-204ENST00000577940 TTLL7Q6ZT98 887 aa10.87□□□□□ -0.67
DDX42-204ENST00000577940 SMC1BQ8NDV3 1235 aa10.87□□□□□ -0.67
DDX42-204ENST00000577940 PRELPP51888 382 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 PARP10Q53GL7 1025 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 PPP1R42Q7Z4L9 355 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 CCDC146Q8IYE0 955 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 C7orf43Q8WVR3 580 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 ADAMTS8Q9UP79 889 aa10.86□□□□□ -0.67
DDX42-204ENST00000577940 N4BP2Q86UW6 1770 aaPredicted RBP10.86□□□□□ -0.67
DDX42-204ENST00000577940 CHL1O00533 1208 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 GRIPAP1Q4V328 841 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 HSP90AB3PQ58FF7 597 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 CC2D2BQ6DHV5 1058 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 GIGYF2Q6Y7W6 1299 aaKnown RBP10.85□□□□□ -0.67
DDX42-204ENST00000577940 ZNF34Q8IZ26 560 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 RPGRQ92834 1020 aaKnown RBP10.85□□□□□ -0.67
DDX42-204ENST00000577940 ZBTB3Q9H5J0 574 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 ZBTB12Q9Y330 459 aaPredicted RBP10.85□□□□□ -0.67
DDX42-204ENST00000577940 KIAA1551Q9HCM1 1747 aa10.85□□□□□ -0.67
DDX42-204ENST00000577940 GPTP24298 496 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 FKBP4Q02790 459 aaKnown RBP eCLIP10.84□□□□□ -0.67
DDX42-204ENST00000577940 CALD1Q05682 793 aaKnown RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 CRY2Q49AN0 593 aa10.84□□□□□ -0.67
DDX42-204ENST00000577940 RBM17Q96I25 401 aaKnown RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 TMX4Q9H1E5 349 aaPredicted RBP10.84□□□□□ -0.67
DDX42-204ENST00000577940 LAS1LQ9Y4W2 734 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms