RNA–Protein interactions for RNA: ENST00000577632.1

CDRT15P1-201, Transcript of CMT1A duplicated region transcript 15 pseudogene 1, humanhuman

BASIC

Gene CDRT15P1, Length 564 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15P1-201ENST00000577632 RGS19P49795 217 aa13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 CCDC24Q8N4L8 307 aa13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 AIDAQ96BJ3 306 aa13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 LGR6Q9HBX8 967 aa13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 ZBTB1Q9Y2K1 713 aa13.1□□□□□ -0.31
CDRT15P1-201ENST00000577632 TAF1DQ9H5J8 278 aaPredicted RBP13.09□□□□□ -0.31
CDRT15P1-201ENST00000577632 COL3A1P02461 1466 aaPredicted RBP13.09□□□□□ -0.31
CDRT15P1-201ENST00000577632 LTBP1Q14766 1721 aa13.08□□□□□ -0.32
CDRT15P1-201ENST00000577632 TMEM88BA6NKF7 163 aa13.08□□□□□ -0.32
CDRT15P1-201ENST00000577632 PRKAR2BP31323 418 aa13.08□□□□□ -0.32
CDRT15P1-201ENST00000577632 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
CDRT15P1-201ENST00000577632 MRC1P22897 1456 aa13.08□□□□□ -0.32
CDRT15P1-201ENST00000577632 RASSF10A6NK89 507 aa13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 MLLT1Q03111 559 aaPredicted RBP13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 SLC39A6Q13433 755 aa13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 BICDL1Q6ZP65 573 aa13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 ZNF622Q969S3 477 aaKnown RBP eCLIP13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 LTBP3Q9NS15 1303 aa13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 BCORQ6W2J9 1755 aa13.07□□□□□ -0.32
CDRT15P1-201ENST00000577632 A0A087WZG4 1122 aa13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 CCDC85CA6NKD9 419 aa13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 HTATSF1O43719 755 aaKnown RBP13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 RALBP1Q15311 655 aa13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
CDRT15P1-201ENST00000577632 TBC1D9BQ66K14 1250 aa13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 ZNF790Q6PG37 636 aa13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 FMNL2Q96PY5 1086 aa13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 TAOK3Q9H2K8 898 aa13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 WDR33Q9C0J8 1336 aaKnown RBP13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
CDRT15P1-201ENST00000577632 SIPA1L3O60292 1781 aaPredicted RBP13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 FMR1Q06787 632 aaKnown RBP eCLIP13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 PRR5LQ6MZQ0 368 aa13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 MKI67P46013 3256 aaKnown RBP13.04□□□□□ -0.32
CDRT15P1-201ENST00000577632 EAPPQ56P03 285 aaPredicted RBP13.03□□□□□ -0.32
CDRT15P1-201ENST00000577632 MAP1SQ66K74 1059 aaPredicted RBP13.03□□□□□ -0.32
CDRT15P1-201ENST00000577632 IL17REQ8NFR9 667 aa13.03□□□□□ -0.32
CDRT15P1-201ENST00000577632 BRIP1Q9BX63 1249 aa13.03□□□□□ -0.32
CDRT15P1-201ENST00000577632 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
CDRT15P1-201ENST00000577632 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 CANXP27824 592 aaKnown RBP13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 EIF5P55010 431 aaKnown RBP13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 PRPF40BQ6NWY9 871 aaKnown RBP13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 TSKSQ9UJT2 592 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 HEG1Q9ULI3 1381 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 COL4A5P29400 1685 aa13.02□□□□□ -0.33
CDRT15P1-201ENST00000577632 PDE6BP35913 854 aa13.01□□□□□ -0.33
CDRT15P1-201ENST00000577632 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
CDRT15P1-201ENST00000577632 CNTROBQ8N137 903 aa13.01□□□□□ -0.33
CDRT15P1-201ENST00000577632 PNISRQ8TF01 805 aaKnown RBP13.01□□□□□ -0.33
CDRT15P1-201ENST00000577632 PHACTR3Q96KR7 559 aa13.01□□□□□ -0.33
CDRT15P1-201ENST00000577632 RNF123Q5XPI4 1314 aa13□□□□□ -0.33
CDRT15P1-201ENST00000577632 SRGNP10124 158 aa13□□□□□ -0.33
CDRT15P1-201ENST00000577632 MAP2K1Q02750 393 aaPredicted RBP13□□□□□ -0.33
CDRT15P1-201ENST00000577632 ZNF496Q96IT1 587 aaPredicted RBP13□□□□□ -0.33
CDRT15P1-201ENST00000577632 CLEC11AQ9Y240 323 aa13□□□□□ -0.33
CDRT15P1-201ENST00000577632 SNRPA1P09661 255 aaKnown RBP12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 EPHX2P34913 555 aa12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 ZEB1P37275 1124 aaPredicted RBP12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 IL6STP40189 918 aaPredicted RBP12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 TAF7Q15545 349 aaPredicted RBP12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 HACL1Q9UJ83 578 aa12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
CDRT15P1-201ENST00000577632 CENPFP49454 3210 aa12.98□□□□□ -0.33
CDRT15P1-201ENST00000577632 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
CDRT15P1-201ENST00000577632 CYP4F22Q6NT55 531 aa12.98□□□□□ -0.33
CDRT15P1-201ENST00000577632 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
CDRT15P1-201ENST00000577632 TBC1D2BQ9UPU7 963 aa12.98□□□□□ -0.33
CDRT15P1-201ENST00000577632 NPHP1O15259 732 aa12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 DDX10Q13206 875 aaKnown RBP12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 CST9Q5W186 159 aa12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 CNKSR1Q969H4 720 aa12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 CAPNS2Q96L46 248 aa12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 DDX21Q9NR30 783 aaKnown RBP eCLIP12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 ZNF330Q9Y3S2 320 aaPredicted RBP12.97□□□□□ -0.33
CDRT15P1-201ENST00000577632 SNED1Q8TER0 1413 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 AOC2O75106 756 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 MCM10Q7L590 875 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 MCOLN1Q9GZU1 580 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 ZNF652Q9Y2D9 606 aa12.96□□□□□ -0.33
CDRT15P1-201ENST00000577632 FZD9O00144 591 aa12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 CAMTA2O94983 1202 aa12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 FKBP4Q02790 459 aaKnown RBP eCLIP12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 GRM1Q13255 1194 aa12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 BRCA2P51587 3418 aa12.95□□□□□ -0.34
CDRT15P1-201ENST00000577632 POLR2AP24928 1970 aaKnown RBP12.94□□□□□ -0.34
CDRT15P1-201ENST00000577632 TRAF5O00463 557 aa12.94□□□□□ -0.34
CDRT15P1-201ENST00000577632 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms