RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 HYPKQ9NX55 129 aa25.28■■□□□ 1.64
SCO1-202ENST00000577335 CHPF2Q9P2E5 772 aa25.28■■□□□ 1.64
SCO1-202ENST00000577335 PROSER3Q2NL68 480 aa25.27■■□□□ 1.64
SCO1-202ENST00000577335 CCDC30Q5VVM6 783 aa25.27■■□□□ 1.64
SCO1-202ENST00000577335 SERPINB2P05120 415 aa25.26■■□□□ 1.63
SCO1-202ENST00000577335 TWISTNBQ3B726 338 aaPredicted RBP25.26■■□□□ 1.63
SCO1-202ENST00000577335 TTLL7Q6ZT98 887 aa25.26■■□□□ 1.63
SCO1-202ENST00000577335 CARMIL3Q8ND23 1372 aa25.26■■□□□ 1.63
SCO1-202ENST00000577335 C10orf71Q711Q0 1435 aa25.26■■□□□ 1.63
SCO1-202ENST00000577335 DCAF8L1A6NGE4 600 aa25.25■■□□□ 1.63
SCO1-202ENST00000577335 TGFB2P61812 414 aa25.25■■□□□ 1.63
SCO1-202ENST00000577335 BICDL1Q6ZP65 573 aa25.25■■□□□ 1.63
SCO1-202ENST00000577335 TSPYL6Q8N831 410 aa25.25■■□□□ 1.63
SCO1-202ENST00000577335 SPINK5Q9NQ38 1064 aaPredicted RBP25.25■■□□□ 1.63
SCO1-202ENST00000577335 BCORQ6W2J9 1755 aa25.24■■□□□ 1.63
SCO1-202ENST00000577335 E9PSI1 815 aa25.24■■□□□ 1.63
SCO1-202ENST00000577335 ANXA1P04083 346 aa25.24■■□□□ 1.63
SCO1-202ENST00000577335 COPS6Q7L5N1 327 aa25.24■■□□□ 1.63
SCO1-202ENST00000577335 HLFQ16534 295 aa25.23■■□□□ 1.63
SCO1-202ENST00000577335 GIGYF2Q6Y7W6 1299 aaKnown RBP25.23■■□□□ 1.63
SCO1-202ENST00000577335 NLGN2Q8NFZ4 835 aa25.23■■□□□ 1.63
SCO1-202ENST00000577335 XAGE3Q8WTP9 111 aa25.23■■□□□ 1.63
SCO1-202ENST00000577335 ZBTB3Q9H5J0 574 aa25.22■■□□□ 1.63
SCO1-202ENST00000577335 ATP10DQ9P241 1426 aa25.21■■□□□ 1.63
SCO1-202ENST00000577335 EXOSC9Q06265 439 aaKnown RBP25.21■■□□□ 1.63
SCO1-202ENST00000577335 STK31Q9BXU1 1019 aa25.21■■□□□ 1.63
SCO1-202ENST00000577335 NIP7Q9Y221 180 aaKnown RBP eCLIP25.21■■□□□ 1.63
SCO1-202ENST00000577335 HSP90AB3PQ58FF7 597 aa25.2■■□□□ 1.62
SCO1-202ENST00000577335 VAMP4O75379 141 aa25.19■■□□□ 1.62
SCO1-202ENST00000577335 AIMP1Q12904 312 aaKnown RBP25.19■■□□□ 1.62
SCO1-202ENST00000577335 PLBD2Q8NHP8 589 aa25.19■■□□□ 1.62
SCO1-202ENST00000577335 SLFN5Q08AF3 891 aa25.18■■□□□ 1.62
SCO1-202ENST00000577335 TPTE2Q6XPS3 522 aa25.18■■□□□ 1.62
SCO1-202ENST00000577335 ANKRD13DQ6ZTN6 518 aa25.18■■□□□ 1.62
SCO1-202ENST00000577335 CNBD1Q8NA66 436 aa25.18■■□□□ 1.62
SCO1-202ENST00000577335 NRXN2Q9P2S2 1712 aa25.17■■□□□ 1.62
SCO1-202ENST00000577335 NBPF5PQ86XG9 351 aaPredicted RBP25.17■■□□□ 1.62
SCO1-202ENST00000577335 ZNF34Q8IZ26 560 aa25.17■■□□□ 1.62
SCO1-202ENST00000577335 PDZRN3Q9UPQ7 1066 aa25.17■■□□□ 1.62
SCO1-202ENST00000577335 PARP10Q53GL7 1025 aa25.16■■□□□ 1.62
SCO1-202ENST00000577335 PRR5LQ6MZQ0 368 aa25.16■■□□□ 1.62
SCO1-202ENST00000577335 BRIP1Q9BX63 1249 aa25.16■■□□□ 1.62
SCO1-202ENST00000577335 NYXQ9GZU5 481 aa25.16■■□□□ 1.62
SCO1-202ENST00000577335 KIF13BQ9NQT8 1826 aa25.16■■□□□ 1.62
SCO1-202ENST00000577335 IBTKQ9P2D0 1353 aaPredicted RBP25.16■■□□□ 1.62
SCO1-202ENST00000577335 PXDNLA1KZ92 1463 aa25.15■■□□□ 1.62
SCO1-202ENST00000577335 NPHP1O15259 732 aa25.15■■□□□ 1.62
SCO1-202ENST00000577335 DDX58O95786 925 aaKnown RBP25.15■■□□□ 1.62
SCO1-202ENST00000577335 ST5P78524 1137 aa25.15■■□□□ 1.62
SCO1-202ENST00000577335 TCIRG1Q13488 830 aa25.14■■□□□ 1.62
SCO1-202ENST00000577335 TRMT2AQ8IZ69 625 aaKnown RBP25.14■■□□□ 1.62
SCO1-202ENST00000577335 PDE6BP35913 854 aa25.13■■□□□ 1.61
SCO1-202ENST00000577335 PHAXQ9H814 394 aaKnown RBP25.13■■□□□ 1.61
SCO1-202ENST00000577335 SLC4A2P04920 1241 aa25.12■■□□□ 1.61
SCO1-202ENST00000577335 DPEP1P16444 411 aa25.12■■□□□ 1.61
SCO1-202ENST00000577335 HNRNPUQ00839 825 aaKnown RBP eCLIP25.12■■□□□ 1.61
SCO1-202ENST00000577335 GPR162Q16538 588 aa25.12■■□□□ 1.61
SCO1-202ENST00000577335 A0A0G2JLW4 131 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 GPTP24298 496 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 PPP1R42Q7Z4L9 355 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 ZNF428Q96B54 188 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 CDCA7LQ96GN5 454 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 RNF123Q5XPI4 1314 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 UBN2Q6ZU65 1347 aa25.11■■□□□ 1.61
SCO1-202ENST00000577335 GTF2E1P29083 439 aaPredicted RBP25.1■■□□□ 1.61
SCO1-202ENST00000577335 RIC3Q7Z5B4 369 aa25.1■■□□□ 1.61
SCO1-202ENST00000577335 AFDNP55196 1824 aaKnown RBP25.09■■□□□ 1.61
SCO1-202ENST00000577335 H0YIN7 160 aa25.09■■□□□ 1.61
SCO1-202ENST00000577335 GRIN3BO60391 1043 aa25.09■■□□□ 1.61
SCO1-202ENST00000577335 TRIM28Q13263 835 aaKnown RBP25.09■■□□□ 1.61
SCO1-202ENST00000577335 PIM2Q9P1W9 311 aa25.09■■□□□ 1.61
SCO1-202ENST00000577335 NUP98P52948 1817 aa25.08■■□□□ 1.61
SCO1-202ENST00000577335 CT47B1P0C2W7 299 aaPredicted RBP25.08■■□□□ 1.61
SCO1-202ENST00000577335 KCNA3P22001 575 aa25.08■■□□□ 1.61
SCO1-202ENST00000577335 SUSD4Q5VX71 490 aa25.08■■□□□ 1.61
SCO1-202ENST00000577335 TCERG1O14776 1098 aaKnown RBP25.07■■□□□ 1.6
SCO1-202ENST00000577335 KSR2Q6VAB6 950 aa25.07■■□□□ 1.6
SCO1-202ENST00000577335 NLRP10Q86W26 655 aa25.07■■□□□ 1.6
SCO1-202ENST00000577335 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
SCO1-202ENST00000577335 ISCA1Q9BUE6 129 aa25.07■■□□□ 1.6
SCO1-202ENST00000577335 UTP14AQ9BVJ6 771 aaKnown RBP25.07■■□□□ 1.6
SCO1-202ENST00000577335 KLRG2A4D1S0 409 aaPredicted RBP25.06■■□□□ 1.6
SCO1-202ENST00000577335 FAM177BA6PVY3 158 aa25.06■■□□□ 1.6
SCO1-202ENST00000577335 NTSR2O95665 410 aa25.06■■□□□ 1.6
SCO1-202ENST00000577335 C2CD5Q86YS7 1000 aa25.06■■□□□ 1.6
SCO1-202ENST00000577335 KIAA1551Q9HCM1 1747 aa25.06■■□□□ 1.6
SCO1-202ENST00000577335 RIC1Q4ADV7 1423 aa25.05■■□□□ 1.6
SCO1-202ENST00000577335 CHRNA5P30532 468 aa25.05■■□□□ 1.6
SCO1-202ENST00000577335 FLIIQ13045 1269 aa25.05■■□□□ 1.6
SCO1-202ENST00000577335 YBX3P16989 372 aaKnown RBP eCLIP25.04■■□□□ 1.6
SCO1-202ENST00000577335 CCDC24Q8N4L8 307 aa25.04■■□□□ 1.6
SCO1-202ENST00000577335 METTL22Q9BUU2 404 aaPredicted RBP25.04■■□□□ 1.6
SCO1-202ENST00000577335 PI4KAP2A4QPH2 592 aa25.03■■□□□ 1.6
SCO1-202ENST00000577335 DALRD3Q5D0E6 543 aaKnown RBP25.03■■□□□ 1.6
SCO1-202ENST00000577335 G2E3Q7L622 706 aa25.03■■□□□ 1.6
SCO1-202ENST00000577335 PI4KAP1Q8N8J0 262 aa25.03■■□□□ 1.6
SCO1-202ENST00000577335 MAP3K2Q9Y2U5 619 aa25.03■■□□□ 1.6
SCO1-202ENST00000577335 ZBED9Q6R2W3 1325 aa25.03■■□□□ 1.6
SCO1-202ENST00000577335 ERFEQ4G0M1 354 aa25.02■■□□□ 1.6
SCO1-202ENST00000577335 SLC10A5Q5PT55 438 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms