RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
TSR1-204ENST00000576112 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
TSR1-204ENST00000576112 PPP2R1AP30153 589 aa19.66■□□□□ 0.74
TSR1-204ENST00000576112 DCTN1Q14203 1278 aa19.66■□□□□ 0.74
TSR1-204ENST00000576112 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
TSR1-204ENST00000576112 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
TSR1-204ENST00000576112 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
TSR1-204ENST00000576112 SRGNP10124 158 aa19.64■□□□□ 0.73
TSR1-204ENST00000576112 PDZRN3Q9UPQ7 1066 aa19.64■□□□□ 0.73
TSR1-204ENST00000576112 LTBP3Q9NS15 1303 aa19.64■□□□□ 0.73
TSR1-204ENST00000576112 NBPF26B4DH59 902 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 NPHP1O15259 732 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 ST5P78524 1137 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 ERFEQ4G0M1 354 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 STYK1Q6J9G0 422 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 NBPF10Q6P3W6 841 aaKnown RBP19.63■□□□□ 0.73
TSR1-204ENST00000576112 NBPF15Q8N660 670 aa19.63■□□□□ 0.73
TSR1-204ENST00000576112 NUP98P52948 1817 aa19.62■□□□□ 0.73
TSR1-204ENST00000576112 NPM2Q86SE8 214 aaKnown RBP19.62■□□□□ 0.73
TSR1-204ENST00000576112 TAOK3Q9H2K8 898 aa19.62■□□□□ 0.73
TSR1-204ENST00000576112 SNRPA1P09661 255 aaKnown RBP19.61■□□□□ 0.73
TSR1-204ENST00000576112 COL13A1Q5TAT6 717 aaPredicted RBP19.61■□□□□ 0.73
TSR1-204ENST00000576112 RTF1Q92541 710 aaKnown RBP19.61■□□□□ 0.73
TSR1-204ENST00000576112 NUDCQ9Y266 331 aa19.61■□□□□ 0.73
TSR1-204ENST00000576112 POTEIP0CG38 1075 aa19.6■□□□□ 0.73
TSR1-204ENST00000576112 POTEJP0CG39 1038 aa19.6■□□□□ 0.73
TSR1-204ENST00000576112 NBPF5PQ86XG9 351 aaPredicted RBP19.6■□□□□ 0.73
TSR1-204ENST00000576112 CNKSR1Q969H4 720 aa19.6■□□□□ 0.73
TSR1-204ENST00000576112 MASTLQ96GX5 879 aa19.6■□□□□ 0.73
TSR1-204ENST00000576112 DDNO94850 711 aaPredicted RBP19.59■□□□□ 0.73
TSR1-204ENST00000576112 SCN4AP35499 1836 aa19.59■□□□□ 0.73
TSR1-204ENST00000576112 DPY19L2Q6NUT2 758 aa19.58■□□□□ 0.72
TSR1-204ENST00000576112 OLFM4Q6UX06 510 aa19.58■□□□□ 0.72
TSR1-204ENST00000576112 CLEC4GQ6UXB4 293 aa19.58■□□□□ 0.72
TSR1-204ENST00000576112 C7orf43Q8WVR3 580 aa19.58■□□□□ 0.72
TSR1-204ENST00000576112 MIS18AQ9NYP9 233 aa19.58■□□□□ 0.72
TSR1-204ENST00000576112 FAM177BA6PVY3 158 aa19.57■□□□□ 0.72
TSR1-204ENST00000576112 HLFQ16534 295 aa19.57■□□□□ 0.72
TSR1-204ENST00000576112 NIP7Q9Y221 180 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSR1-204ENST00000576112 ZNF652Q9Y2D9 606 aa19.57■□□□□ 0.72
TSR1-204ENST00000576112 ADAMTSL1Q8N6G6 1762 aa19.57■□□□□ 0.72
TSR1-204ENST00000576112 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
TSR1-204ENST00000576112 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
TSR1-204ENST00000576112 SNED1Q8TER0 1413 aa19.55■□□□□ 0.72
TSR1-204ENST00000576112 ZNF541Q9H0D2 1346 aa19.54■□□□□ 0.72
TSR1-204ENST00000576112 KLRG2A4D1S0 409 aaPredicted RBP19.54■□□□□ 0.72
TSR1-204ENST00000576112 NPR1P16066 1061 aa19.54■□□□□ 0.72
TSR1-204ENST00000576112 CCDC93Q567U6 631 aa19.54■□□□□ 0.72
TSR1-204ENST00000576112 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
TSR1-204ENST00000576112 COL4A5P29400 1685 aa19.54■□□□□ 0.72
TSR1-204ENST00000576112 HSPA1AP0DMV8 641 aaKnown RBP19.53■□□□□ 0.72
TSR1-204ENST00000576112 HSPA1BP0DMV9 641 aaKnown RBP19.53■□□□□ 0.72
TSR1-204ENST00000576112 TAF7Q15545 349 aaPredicted RBP19.53■□□□□ 0.72
TSR1-204ENST00000576112 ZNF277Q9NRM2 450 aaPredicted RBP19.53■□□□□ 0.72
TSR1-204ENST00000576112 FKBP4Q02790 459 aaKnown RBP eCLIP19.52■□□□□ 0.72
TSR1-204ENST00000576112 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
TSR1-204ENST00000576112 SLC51AQ86UW1 340 aa19.52■□□□□ 0.72
TSR1-204ENST00000576112 THUMPD2Q9BTF0 503 aaKnown RBP19.52■□□□□ 0.72
TSR1-204ENST00000576112 RGL2O15211 777 aa19.51■□□□□ 0.71
TSR1-204ENST00000576112 TPTE2Q6XPS3 522 aa19.51■□□□□ 0.71
TSR1-204ENST00000576112 NGEFQ8N5V2 710 aa19.51■□□□□ 0.71
TSR1-204ENST00000576112 LTBP1Q14766 1721 aa19.51■□□□□ 0.71
TSR1-204ENST00000576112 NUTM1Q86Y26 1132 aa19.5■□□□□ 0.71
TSR1-204ENST00000576112 L3MBTL3Q96JM7 780 aaPredicted RBP19.5■□□□□ 0.71
TSR1-204ENST00000576112 PLEKHF1Q96S99 279 aa19.5■□□□□ 0.71
TSR1-204ENST00000576112 TTLL7Q6ZT98 887 aa19.49■□□□□ 0.71
TSR1-204ENST00000576112 TAF1DQ9H5J8 278 aaPredicted RBP19.49■□□□□ 0.71
TSR1-204ENST00000576112 MKRN1Q9UHC7 482 aaKnown RBP19.49■□□□□ 0.71
TSR1-204ENST00000576112 UBN2Q6ZU65 1347 aa19.49■□□□□ 0.71
TSR1-204ENST00000576112 LAMB2P55268 1798 aa19.48■□□□□ 0.71
TSR1-204ENST00000576112 ANKRD36CQ5JPF3 1778 aa19.48■□□□□ 0.71
TSR1-204ENST00000576112 CREBZFQ9NS37 354 aa19.48■□□□□ 0.71
TSR1-204ENST00000576112 MAP3K15Q6ZN16 1313 aa19.48■□□□□ 0.71
TSR1-204ENST00000576112 PASKQ96RG2 1323 aa19.48■□□□□ 0.71
TSR1-204ENST00000576112 CAPN15O75808 1086 aa19.47■□□□□ 0.71
TSR1-204ENST00000576112 EIF4A1P60842 406 aaKnown RBP19.47■□□□□ 0.71
TSR1-204ENST00000576112 CRY2Q49AN0 593 aa19.47■□□□□ 0.71
TSR1-204ENST00000576112 TNS4Q8IZW8 715 aa19.47■□□□□ 0.71
TSR1-204ENST00000576112 RIC1Q4ADV7 1423 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 MYL6BP14649 208 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 GPTP24298 496 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 IARSP41252 1262 aaKnown RBP19.46■□□□□ 0.71
TSR1-204ENST00000576112 NFE2L2Q16236 605 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 LDHDQ86WU2 507 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 ZBTB3Q9H5J0 574 aa19.46■□□□□ 0.71
TSR1-204ENST00000576112 RRP7AQ9Y3A4 280 aaKnown RBP19.46■□□□□ 0.71
TSR1-204ENST00000576112 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
TSR1-204ENST00000576112 RTKN2Q8IZC4 609 aa19.45■□□□□ 0.7
TSR1-204ENST00000576112 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
TSR1-204ENST00000576112 CNTNAP1P78357 1384 aa19.44■□□□□ 0.7
TSR1-204ENST00000576112 IBTKQ9P2D0 1353 aaPredicted RBP19.44■□□□□ 0.7
TSR1-204ENST00000576112 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
TSR1-204ENST00000576112 EAPPQ56P03 285 aaPredicted RBP19.44■□□□□ 0.7
TSR1-204ENST00000576112 SYNE4Q8N205 404 aa19.44■□□□□ 0.7
TSR1-204ENST00000576112 PNISRQ8TF01 805 aaKnown RBP19.44■□□□□ 0.7
TSR1-204ENST00000576112 FZD9O00144 591 aa19.43■□□□□ 0.7
TSR1-204ENST00000576112 KIF6Q6ZMV9 814 aa19.43■□□□□ 0.7
TSR1-204ENST00000576112 C3orf67Q6ZVT6 689 aa19.43■□□□□ 0.7
TSR1-204ENST00000576112 NYXQ9GZU5 481 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms