RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 DCAF8L1A6NGE4 600 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 ERVV-1B6SEH8 477 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 RGL2O15211 777 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 AIMP1Q12904 312 aaKnown RBP19.6■□□□□ 0.73
LITAF-217ENST00000575426 PROSER3Q2NL68 480 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 TBC1D9BQ66K14 1250 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 TSPYL6Q8N831 410 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 HYPKQ9NX55 129 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 CD2APQ9Y5K6 639 aa19.6■□□□□ 0.73
LITAF-217ENST00000575426 SRCAPQ6ZRS2 3230 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 MAP3K15Q6ZN16 1313 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 E9PSI1 815 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 EXOSC9Q06265 439 aaKnown RBP19.59■□□□□ 0.73
LITAF-217ENST00000575426 TTLL7Q6ZT98 887 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 COPS6Q7L5N1 327 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 STK31Q9BXU1 1019 aa19.59■□□□□ 0.73
LITAF-217ENST00000575426 SPINK5Q9NQ38 1064 aaPredicted RBP19.59■□□□□ 0.73
LITAF-217ENST00000575426 POLRMTO00411 1230 aaKnown RBP19.58■□□□□ 0.72
LITAF-217ENST00000575426 NPHP1O15259 732 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 SERPINB2P05120 415 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 DDR1Q08345 913 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 XAGE3Q8WTP9 111 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 ZBTB3Q9H5J0 574 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 KIF13BQ9NQT8 1826 aa19.58■□□□□ 0.72
LITAF-217ENST00000575426 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
LITAF-217ENST00000575426 HLFQ16534 295 aa19.56■□□□□ 0.72
LITAF-217ENST00000575426 LRP10Q7Z4F1 713 aa19.56■□□□□ 0.72
LITAF-217ENST00000575426 NIP7Q9Y221 180 aaKnown RBP eCLIP19.56■□□□□ 0.72
LITAF-217ENST00000575426 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
LITAF-217ENST00000575426 SLFN5Q08AF3 891 aa19.55■□□□□ 0.72
LITAF-217ENST00000575426 GIGYF2Q6Y7W6 1299 aaKnown RBP19.55■□□□□ 0.72
LITAF-217ENST00000575426 NRXN2Q9P2S2 1712 aa19.55■□□□□ 0.72
LITAF-217ENST00000575426 VAMP4O75379 141 aa19.54■□□□□ 0.72
LITAF-217ENST00000575426 ANKRD36CQ5JPF3 1778 aa19.54■□□□□ 0.72
LITAF-217ENST00000575426 N4BP2Q86UW6 1770 aaPredicted RBP19.54■□□□□ 0.72
LITAF-217ENST00000575426 HSP90AB3PQ58FF7 597 aa19.53■□□□□ 0.72
LITAF-217ENST00000575426 ANKRD13DQ6ZTN6 518 aa19.53■□□□□ 0.72
LITAF-217ENST00000575426 NLGN2Q8NFZ4 835 aa19.53■□□□□ 0.72
LITAF-217ENST00000575426 TCERG1O14776 1098 aaKnown RBP19.52■□□□□ 0.72
LITAF-217ENST00000575426 DDX58O95786 925 aaKnown RBP19.52■□□□□ 0.72
LITAF-217ENST00000575426 TGFB2P61812 414 aa19.52■□□□□ 0.72
LITAF-217ENST00000575426 NBPF5PQ86XG9 351 aaPredicted RBP19.52■□□□□ 0.72
LITAF-217ENST00000575426 PLBD2Q8NHP8 589 aa19.52■□□□□ 0.72
LITAF-217ENST00000575426 CDCA7LQ96GN5 454 aa19.52■□□□□ 0.72
LITAF-217ENST00000575426 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 FAM177BA6PVY3 158 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 SLC4A2P04920 1241 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
LITAF-217ENST00000575426 ST5P78524 1137 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 TPTE2Q6XPS3 522 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 RIC3Q7Z5B4 369 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 CNBD1Q8NA66 436 aa19.51■□□□□ 0.71
LITAF-217ENST00000575426 PHAXQ9H814 394 aaKnown RBP19.51■□□□□ 0.71
LITAF-217ENST00000575426 ARFGEF2Q9Y6D5 1785 aa19.5■□□□□ 0.71
LITAF-217ENST00000575426 GPTP24298 496 aa19.5■□□□□ 0.71
LITAF-217ENST00000575426 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
LITAF-217ENST00000575426 NYXQ9GZU5 481 aa19.5■□□□□ 0.71
LITAF-217ENST00000575426 ATP10DQ9P241 1426 aa19.5■□□□□ 0.71
LITAF-217ENST00000575426 PPP1R42Q7Z4L9 355 aa19.49■□□□□ 0.71
LITAF-217ENST00000575426 ZNF34Q8IZ26 560 aa19.49■□□□□ 0.71
LITAF-217ENST00000575426 TCIRG1Q13488 830 aa19.48■□□□□ 0.71
LITAF-217ENST00000575426 GPR162Q16538 588 aa19.48■□□□□ 0.71
LITAF-217ENST00000575426 PARP10Q53GL7 1025 aa19.48■□□□□ 0.71
LITAF-217ENST00000575426 PRR5LQ6MZQ0 368 aa19.48■□□□□ 0.71
LITAF-217ENST00000575426 A0A0G2JLW4 131 aa19.47■□□□□ 0.71
LITAF-217ENST00000575426 BRIP1Q9BX63 1249 aa19.47■□□□□ 0.71
LITAF-217ENST00000575426 PDZRN3Q9UPQ7 1066 aa19.47■□□□□ 0.71
LITAF-217ENST00000575426 ANKRD31Q8N7Z5 1873 aa19.47■□□□□ 0.71
LITAF-217ENST00000575426 KIAA1551Q9HCM1 1747 aa19.46■□□□□ 0.71
LITAF-217ENST00000575426 DPEP1P16444 411 aa19.46■□□□□ 0.71
LITAF-217ENST00000575426 PDE6BP35913 854 aa19.46■□□□□ 0.71
LITAF-217ENST00000575426 TRMT2AQ8IZ69 625 aaKnown RBP19.46■□□□□ 0.71
LITAF-217ENST00000575426 CCDC24Q8N4L8 307 aa19.46■□□□□ 0.71
LITAF-217ENST00000575426 H0YIN7 160 aa19.45■□□□□ 0.7
LITAF-217ENST00000575426 SUSD4Q5VX71 490 aa19.45■□□□□ 0.7
LITAF-217ENST00000575426 PXDNLA1KZ92 1463 aa19.45■□□□□ 0.7
LITAF-217ENST00000575426 BRCA1P38398 1863 aaKnown RBP19.44■□□□□ 0.7
LITAF-217ENST00000575426 KSR2Q6VAB6 950 aa19.44■□□□□ 0.7
LITAF-217ENST00000575426 ZNF428Q96B54 188 aa19.44■□□□□ 0.7
LITAF-217ENST00000575426 UTP14AQ9BVJ6 771 aaKnown RBP19.44■□□□□ 0.7
LITAF-217ENST00000575426 UBN2Q6ZU65 1347 aa19.44■□□□□ 0.7
LITAF-217ENST00000575426 CT47B1P0C2W7 299 aaPredicted RBP19.43■□□□□ 0.7
LITAF-217ENST00000575426 CHRNA5P30532 468 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 FLIIQ13045 1269 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 FKBP5Q13451 457 aaPredicted RBP19.43■□□□□ 0.7
LITAF-217ENST00000575426 G2E3Q7L622 706 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 C2CD5Q86YS7 1000 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 PIM2Q9P1W9 311 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
LITAF-217ENST00000575426 IBTKQ9P2D0 1353 aaPredicted RBP19.43■□□□□ 0.7
LITAF-217ENST00000575426 DLEC1Q9Y238 1755 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 ATP5J2-PTCD1G3V325 749 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 NEXNQ0ZGT2 675 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 NLRP10Q86W26 655 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 NUTM1Q86Y26 1132 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 MYD88Q99836 296 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 WWC3Q9ULE0 1092 aa19.42■□□□□ 0.7
LITAF-217ENST00000575426 MAP3K2Q9Y2U5 619 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms