RNA–Protein interactions for RNA: ENST00000575135.5

TVP23A-209, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,298 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-209ENST00000575135 FER1L6Q2WGJ9 1857 aa22.35■■□□□ 1.17
TVP23A-209ENST00000575135 SNRPA1P09661 255 aaKnown RBP22.35■■□□□ 1.17
TVP23A-209ENST00000575135 ST5P78524 1137 aa22.35■■□□□ 1.17
TVP23A-209ENST00000575135 DCTN1Q14203 1278 aa22.35■■□□□ 1.17
TVP23A-209ENST00000575135 SLX4Q8IY92 1834 aa22.34■■□□□ 1.17
TVP23A-209ENST00000575135 POTECB2RU33 542 aa22.34■■□□□ 1.17
TVP23A-209ENST00000575135 SRGNP10124 158 aa22.34■■□□□ 1.17
TVP23A-209ENST00000575135 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
TVP23A-209ENST00000575135 CNKSR1Q969H4 720 aa22.34■■□□□ 1.17
TVP23A-209ENST00000575135 DICER1Q9UPY3 1922 aaKnown RBP22.33■■□□□ 1.17
TVP23A-209ENST00000575135 ERFEQ4G0M1 354 aa22.33■■□□□ 1.17
TVP23A-209ENST00000575135 STYK1Q6J9G0 422 aa22.33■■□□□ 1.17
TVP23A-209ENST00000575135 DPY19L2Q6NUT2 758 aa22.33■■□□□ 1.17
TVP23A-209ENST00000575135 PRPF40BQ6NWY9 871 aaKnown RBP22.32■■□□□ 1.16
TVP23A-209ENST00000575135 CLEC4GQ6UXB4 293 aa22.32■■□□□ 1.16
TVP23A-209ENST00000575135 TAOK3Q9H2K8 898 aa22.32■■□□□ 1.16
TVP23A-209ENST00000575135 CACNA1SQ13698 1873 aa22.32■■□□□ 1.16
TVP23A-209ENST00000575135 NBPF26B4DH59 902 aa22.31■■□□□ 1.16
TVP23A-209ENST00000575135 NBPF10Q6P3W6 841 aaKnown RBP22.31■■□□□ 1.16
TVP23A-209ENST00000575135 NBPF5PQ86XG9 351 aaPredicted RBP22.31■■□□□ 1.16
TVP23A-209ENST00000575135 NBPF15Q8N660 670 aa22.31■■□□□ 1.16
TVP23A-209ENST00000575135 MASTLQ96GX5 879 aa22.31■■□□□ 1.16
TVP23A-209ENST00000575135 LTBP3Q9NS15 1303 aa22.31■■□□□ 1.16
TVP23A-209ENST00000575135 HTATSF1O43719 755 aaKnown RBP22.3■■□□□ 1.16
TVP23A-209ENST00000575135 ZNF652Q9Y2D9 606 aa22.3■■□□□ 1.16
TVP23A-209ENST00000575135 TAF7Q15545 349 aaPredicted RBP22.29■■□□□ 1.16
TVP23A-209ENST00000575135 MIS18AQ9NYP9 233 aa22.29■■□□□ 1.16
TVP23A-209ENST00000575135 ARFGEF2Q9Y6D5 1785 aa22.27■■□□□ 1.16
TVP23A-209ENST00000575135 SOGA3Q5TF21 947 aa22.27■■□□□ 1.16
TVP23A-209ENST00000575135 NIP7Q9Y221 180 aaKnown RBP eCLIP22.27■■□□□ 1.16
TVP23A-209ENST00000575135 TPTE2Q6XPS3 522 aa22.26■■□□□ 1.15
TVP23A-209ENST00000575135 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
TVP23A-209ENST00000575135 FAM177BA6PVY3 158 aa22.25■■□□□ 1.15
TVP23A-209ENST00000575135 DDNO94850 711 aaPredicted RBP22.25■■□□□ 1.15
TVP23A-209ENST00000575135 NPR1P16066 1061 aa22.25■■□□□ 1.15
TVP23A-209ENST00000575135 HLFQ16534 295 aa22.25■■□□□ 1.15
TVP23A-209ENST00000575135 KLRG2A4D1S0 409 aaPredicted RBP22.24■■□□□ 1.15
TVP23A-209ENST00000575135 RGL2O15211 777 aa22.24■■□□□ 1.15
TVP23A-209ENST00000575135 COL13A1Q5TAT6 717 aaPredicted RBP22.24■■□□□ 1.15
TVP23A-209ENST00000575135 CCDC93Q567U6 631 aa22.22■■□□□ 1.15
TVP23A-209ENST00000575135 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 CHADLQ6NUI6 762 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 OLFM4Q6UX06 510 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 NGEFQ8N5V2 710 aa22.21■■□□□ 1.15
TVP23A-209ENST00000575135 NEFMP07197 916 aa22.2■■□□□ 1.14
TVP23A-209ENST00000575135 LAMB4A4D0S4 1761 aa22.2■■□□□ 1.14
TVP23A-209ENST00000575135 GTF2E1P29083 439 aaPredicted RBP22.19■■□□□ 1.14
TVP23A-209ENST00000575135 FKBP4Q02790 459 aaKnown RBP eCLIP22.18■■□□□ 1.14
TVP23A-209ENST00000575135 PNISRQ8TF01 805 aaKnown RBP22.18■■□□□ 1.14
TVP23A-209ENST00000575135 PLEKHF1Q96S99 279 aa22.18■■□□□ 1.14
TVP23A-209ENST00000575135 ZNF277Q9NRM2 450 aaPredicted RBP22.18■■□□□ 1.14
TVP23A-209ENST00000575135 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
TVP23A-209ENST00000575135 EIF4A1P60842 406 aaKnown RBP22.17■■□□□ 1.14
TVP23A-209ENST00000575135 NFE2L2Q16236 605 aa22.17■■□□□ 1.14
TVP23A-209ENST00000575135 THUMPD2Q9BTF0 503 aaKnown RBP22.17■■□□□ 1.14
TVP23A-209ENST00000575135 RRP7AQ9Y3A4 280 aaKnown RBP22.17■■□□□ 1.14
TVP23A-209ENST00000575135 ERVV-1B6SEH8 477 aa22.16■■□□□ 1.14
TVP23A-209ENST00000575135 ALDH1B1P30837 517 aa22.16■■□□□ 1.14
TVP23A-209ENST00000575135 RTKN2Q8IZC4 609 aa22.16■■□□□ 1.14
TVP23A-209ENST00000575135 L3MBTL3Q96JM7 780 aaPredicted RBP22.16■■□□□ 1.14
TVP23A-209ENST00000575135 NUP98P52948 1817 aa22.15■■□□□ 1.14
TVP23A-209ENST00000575135 IQCA1LA6NCM1 817 aa22.15■■□□□ 1.14
TVP23A-209ENST00000575135 TTLL7Q6ZT98 887 aa22.15■■□□□ 1.14
TVP23A-209ENST00000575135 NUTM1Q86Y26 1132 aa22.15■■□□□ 1.14
TVP23A-209ENST00000575135 TAF1DQ9H5J8 278 aaPredicted RBP22.15■■□□□ 1.14
TVP23A-209ENST00000575135 SCN4AP35499 1836 aa22.15■■□□□ 1.14
TVP23A-209ENST00000575135 MAP3K15Q6ZN16 1313 aa22.14■■□□□ 1.14
TVP23A-209ENST00000575135 ZNF541Q9H0D2 1346 aa22.14■■□□□ 1.14
TVP23A-209ENST00000575135 HSPA1AP0DMV8 641 aaKnown RBP22.14■■□□□ 1.13
TVP23A-209ENST00000575135 HSPA1BP0DMV9 641 aaKnown RBP22.14■■□□□ 1.13
TVP23A-209ENST00000575135 MYL6BP14649 208 aa22.14■■□□□ 1.13
TVP23A-209ENST00000575135 NYXQ9GZU5 481 aa22.14■■□□□ 1.13
TVP23A-209ENST00000575135 CREBZFQ9NS37 354 aa22.14■■□□□ 1.13
TVP23A-209ENST00000575135 ABCC12Q96J65 1359 aa22.13■■□□□ 1.13
TVP23A-209ENST00000575135 CRY2Q49AN0 593 aa22.13■■□□□ 1.13
TVP23A-209ENST00000575135 KIF6Q6ZMV9 814 aa22.13■■□□□ 1.13
TVP23A-209ENST00000575135 LDHDQ86WU2 507 aa22.13■■□□□ 1.13
TVP23A-209ENST00000575135 SYNE4Q8N205 404 aa22.13■■□□□ 1.13
TVP23A-209ENST00000575135 GPTP24298 496 aa22.12■■□□□ 1.13
TVP23A-209ENST00000575135 IARSP41252 1262 aaKnown RBP22.12■■□□□ 1.13
TVP23A-209ENST00000575135 ZBTB3Q9H5J0 574 aa22.11■■□□□ 1.13
TVP23A-209ENST00000575135 MKRN1Q9UHC7 482 aaKnown RBP22.11■■□□□ 1.13
TVP23A-209ENST00000575135 UBN2Q6ZU65 1347 aa22.1■■□□□ 1.13
TVP23A-209ENST00000575135 MAPK8IP3Q9UPT6 1336 aa22.1■■□□□ 1.13
TVP23A-209ENST00000575135 TNS4Q8IZW8 715 aa22.1■■□□□ 1.13
TVP23A-209ENST00000575135 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
TVP23A-209ENST00000575135 PASKQ96RG2 1323 aa22.09■■□□□ 1.13
TVP23A-209ENST00000575135 FZD9O00144 591 aa22.09■■□□□ 1.13
TVP23A-209ENST00000575135 EAPPQ56P03 285 aaPredicted RBP22.09■■□□□ 1.13
TVP23A-209ENST00000575135 SUSD4Q5VX71 490 aa22.09■■□□□ 1.13
TVP23A-209ENST00000575135 RPGRQ92834 1020 aaKnown RBP22.09■■□□□ 1.13
TVP23A-209ENST00000575135 HACL1Q9UJ83 578 aa22.09■■□□□ 1.13
TVP23A-209ENST00000575135 SNED1Q8TER0 1413 aa22.08■■□□□ 1.13
TVP23A-209ENST00000575135 HOXA10P31260 410 aaPredicted RBP22.08■■□□□ 1.13
TVP23A-209ENST00000575135 ZNF34Q8IZ26 560 aa22.08■■□□□ 1.13
TVP23A-209ENST00000575135 PSMD1Q99460 953 aa22.08■■□□□ 1.13
TVP23A-209ENST00000575135 CAPN15O75808 1086 aa22.07■■□□□ 1.12
TVP23A-209ENST00000575135 ITGBL1O95965 494 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms