RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 SRGNP10124 158 aa20.18■□□□□ 0.82
CTNS-209ENST00000574776 NBPF5PQ86XG9 351 aaPredicted RBP20.18■□□□□ 0.82
CTNS-209ENST00000574776 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
CTNS-209ENST00000574776 PLEKHF1Q96S99 279 aa20.18■□□□□ 0.82
CTNS-209ENST00000574776 ZNF652Q9Y2D9 606 aa20.18■□□□□ 0.82
CTNS-209ENST00000574776 STYK1Q6J9G0 422 aa20.17■□□□□ 0.82
CTNS-209ENST00000574776 MASTLQ96GX5 879 aa20.17■□□□□ 0.82
CTNS-209ENST00000574776 VEGFAP15692 232 aaPredicted RBP20.16■□□□□ 0.82
CTNS-209ENST00000574776 HTRA3P83110 453 aa20.16■□□□□ 0.82
CTNS-209ENST00000574776 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
CTNS-209ENST00000574776 NIP7Q9Y221 180 aaKnown RBP eCLIP20.16■□□□□ 0.82
CTNS-209ENST00000574776 COL11A2P13942 1736 aaPredicted RBP20.16■□□□□ 0.82
CTNS-209ENST00000574776 BCORQ6W2J9 1755 aa20.16■□□□□ 0.82
CTNS-209ENST00000574776 FAM177BA6PVY3 158 aa20.15■□□□□ 0.82
CTNS-209ENST00000574776 NFE2L2Q16236 605 aa20.15■□□□□ 0.82
CTNS-209ENST00000574776 HLFQ16534 295 aa20.15■□□□□ 0.82
CTNS-209ENST00000574776 PRPF40BQ6NWY9 871 aaKnown RBP20.15■□□□□ 0.82
CTNS-209ENST00000574776 TPTE2Q6XPS3 522 aa20.15■□□□□ 0.82
CTNS-209ENST00000574776 NGEFQ8N5V2 710 aa20.15■□□□□ 0.82
CTNS-209ENST00000574776 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CTNS-209ENST00000574776 DLG5Q8TDM6 1919 aa20.14■□□□□ 0.81
CTNS-209ENST00000574776 SLX4Q8IY92 1834 aa20.14■□□□□ 0.81
CTNS-209ENST00000574776 TNRC6CQ9HCJ0 1690 aaKnown RBP20.14■□□□□ 0.81
CTNS-209ENST00000574776 ERFEQ4G0M1 354 aa20.14■□□□□ 0.81
CTNS-209ENST00000574776 DPY19L2Q6NUT2 758 aa20.14■□□□□ 0.81
CTNS-209ENST00000574776 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
CTNS-209ENST00000574776 PNNQ9H307 717 aaKnown RBP20.13■□□□□ 0.81
CTNS-209ENST00000574776 FER1L6Q2WGJ9 1857 aa20.12■□□□□ 0.81
CTNS-209ENST00000574776 POTECB2RU33 542 aa20.12■□□□□ 0.81
CTNS-209ENST00000574776 EIF4A1P60842 406 aaKnown RBP20.12■□□□□ 0.81
CTNS-209ENST00000574776 IFFO2Q5TF58 517 aa20.12■□□□□ 0.81
CTNS-209ENST00000574776 TAOK3Q9H2K8 898 aa20.12■□□□□ 0.81
CTNS-209ENST00000574776 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
CTNS-209ENST00000574776 MAPK8IP3Q9UPT6 1336 aa20.11■□□□□ 0.81
CTNS-209ENST00000574776 RGL2O15211 777 aa20.11■□□□□ 0.81
CTNS-209ENST00000574776 NPR1P16066 1061 aa20.11■□□□□ 0.81
CTNS-209ENST00000574776 LTBP3Q9NS15 1303 aa20.1■□□□□ 0.81
CTNS-209ENST00000574776 CACNA1SQ13698 1873 aa20.1■□□□□ 0.81
CTNS-209ENST00000574776 KLRG2A4D1S0 409 aaPredicted RBP20.1■□□□□ 0.81
CTNS-209ENST00000574776 GTF2E1P29083 439 aaPredicted RBP20.1■□□□□ 0.81
CTNS-209ENST00000574776 SOGA3Q5TF21 947 aa20.1■□□□□ 0.81
CTNS-209ENST00000574776 C7orf43Q8WVR3 580 aa20.1■□□□□ 0.81
CTNS-209ENST00000574776 TIAM2Q8IVF5 1701 aa20.1■□□□□ 0.81
CTNS-209ENST00000574776 MYL6BP14649 208 aa20.09■□□□□ 0.81
CTNS-209ENST00000574776 WDR90Q96KV7 1748 aa20.09■□□□□ 0.81
CTNS-209ENST00000574776 DICER1Q9UPY3 1922 aaKnown RBP20.08■□□□□ 0.81
CTNS-209ENST00000574776 ERVV-1B6SEH8 477 aa20.08■□□□□ 0.81
CTNS-209ENST00000574776 TTLL7Q6ZT98 887 aa20.08■□□□□ 0.81
CTNS-209ENST00000574776 KLRG1Q96E93 195 aa20.08■□□□□ 0.81
CTNS-209ENST00000574776 KDM3BQ7LBC6 1761 aa20.07■□□□□ 0.8
CTNS-209ENST00000574776 MAP3K15Q6ZN16 1313 aa20.06■□□□□ 0.8
CTNS-209ENST00000574776 DDNO94850 711 aaPredicted RBP20.06■□□□□ 0.8
CTNS-209ENST00000574776 RIPK4P57078 832 aa20.06■□□□□ 0.8
CTNS-209ENST00000574776 RALBP1Q15311 655 aa20.06■□□□□ 0.8
CTNS-209ENST00000574776 CCDC93Q567U6 631 aa20.06■□□□□ 0.8
CTNS-209ENST00000574776 OLFM4Q6UX06 510 aa20.06■□□□□ 0.8
CTNS-209ENST00000574776 ALDH1B1P30837 517 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 KIF6Q6ZMV9 814 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 NUTM1Q86Y26 1132 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 ZBTB3Q9H5J0 574 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 TSPYL4Q9UJ04 414 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 LAMB4A4D0S4 1761 aa20.05■□□□□ 0.8
CTNS-209ENST00000574776 ARFGEF2Q9Y6D5 1785 aa20.04■□□□□ 0.8
CTNS-209ENST00000574776 GPTP24298 496 aa20.04■□□□□ 0.8
CTNS-209ENST00000574776 DDX10Q13206 875 aaKnown RBP20.04■□□□□ 0.8
CTNS-209ENST00000574776 NYXQ9GZU5 481 aa20.04■□□□□ 0.8
CTNS-209ENST00000574776 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
CTNS-209ENST00000574776 ZNF277Q9NRM2 450 aaPredicted RBP20.03■□□□□ 0.8
CTNS-209ENST00000574776 NUP98P52948 1817 aa20.02■□□□□ 0.8
CTNS-209ENST00000574776 EIF2S2P20042 333 aaKnown RBP20.02■□□□□ 0.8
CTNS-209ENST00000574776 RTKN2Q8IZC4 609 aa20.02■□□□□ 0.8
CTNS-209ENST00000574776 JMYQ8N9B5 988 aa20.02■□□□□ 0.8
CTNS-209ENST00000574776 TMPOP42166 694 aaKnown RBP20.01■□□□□ 0.79
CTNS-209ENST00000574776 SUSD4Q5VX71 490 aa20.01■□□□□ 0.79
CTNS-209ENST00000574776 ABCC12Q96J65 1359 aa20■□□□□ 0.79
CTNS-209ENST00000574776 CRY2Q49AN0 593 aa20■□□□□ 0.79
CTNS-209ENST00000574776 ZNF34Q8IZ26 560 aa20■□□□□ 0.79
CTNS-209ENST00000574776 SYNE4Q8N205 404 aa20■□□□□ 0.79
CTNS-209ENST00000574776 UBN2Q6ZU65 1347 aa20■□□□□ 0.79
CTNS-209ENST00000574776 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
CTNS-209ENST00000574776 POTEJP0CG39 1038 aa19.99■□□□□ 0.79
CTNS-209ENST00000574776 PDIA6Q15084 440 aa19.99■□□□□ 0.79
CTNS-209ENST00000574776 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
CTNS-209ENST00000574776 GIGYF2Q6Y7W6 1299 aaKnown RBP19.99■□□□□ 0.79
CTNS-209ENST00000574776 ERBB4Q15303 1308 aa19.99■□□□□ 0.79
CTNS-209ENST00000574776 CHADLQ6NUI6 762 aa19.98■□□□□ 0.79
CTNS-209ENST00000574776 CCDC146Q8IYE0 955 aa19.98■□□□□ 0.79
CTNS-209ENST00000574776 RPGRQ92834 1020 aaKnown RBP19.98■□□□□ 0.79
CTNS-209ENST00000574776 BABAM1Q9NWV8 329 aa19.98■□□□□ 0.79
CTNS-209ENST00000574776 ANXA1P04083 346 aa19.97■□□□□ 0.79
CTNS-209ENST00000574776 HOXA10P31260 410 aaPredicted RBP19.97■□□□□ 0.79
CTNS-209ENST00000574776 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
CTNS-209ENST00000574776 PROSER3Q2NL68 480 aa19.97■□□□□ 0.79
CTNS-209ENST00000574776 LRP10Q7Z4F1 713 aa19.97■□□□□ 0.79
CTNS-209ENST00000574776 NECTIN2Q92692 538 aa19.97■□□□□ 0.79
CTNS-209ENST00000574776 IQCA1LA6NCM1 817 aa19.96■□□□□ 0.79
CTNS-209ENST00000574776 LMOD3Q0VAK6 560 aa19.96■□□□□ 0.79
CTNS-209ENST00000574776 L3MBTL3Q96JM7 780 aaPredicted RBP19.96■□□□□ 0.79
CTNS-209ENST00000574776 MYBBP1AQ9BQG0 1328 aaKnown RBP19.96■□□□□ 0.79
CTNS-209ENST00000574776 ZNF541Q9H0D2 1346 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms