RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 BCL2L12Q9HB09 334 aa20.14■□□□□ 0.81
CCNE1-204ENST00000574121 SCN7AQ01118 1682 aa20.13■□□□□ 0.81
CCNE1-204ENST00000574121 POLD1P28340 1107 aa20.13■□□□□ 0.81
CCNE1-204ENST00000574121 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
CCNE1-204ENST00000574121 DDX58O95786 925 aaKnown RBP20.12■□□□□ 0.81
CCNE1-204ENST00000574121 AIMP1Q12904 312 aaKnown RBP20.12■□□□□ 0.81
CCNE1-204ENST00000574121 FKBP8Q14318 412 aa20.12■□□□□ 0.81
CCNE1-204ENST00000574121 GIGYF2Q6Y7W6 1299 aaKnown RBP20.12■□□□□ 0.81
CCNE1-204ENST00000574121 PLBD2Q8NHP8 589 aa20.12■□□□□ 0.81
CCNE1-204ENST00000574121 SGIP1Q9BQI5 828 aa20.12■□□□□ 0.81
CCNE1-204ENST00000574121 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
CCNE1-204ENST00000574121 ATF5Q9Y2D1 282 aaPredicted RBP20.12■□□□□ 0.81
CCNE1-204ENST00000574121 COL24A1Q17RW2 1714 aa20.11■□□□□ 0.81
CCNE1-204ENST00000574121 TCERG1O14776 1098 aaKnown RBP20.11■□□□□ 0.81
CCNE1-204ENST00000574121 PTGER2P43116 358 aa20.11■□□□□ 0.81
CCNE1-204ENST00000574121 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
CCNE1-204ENST00000574121 ANKRD13DQ6ZTN6 518 aa20.11■□□□□ 0.81
CCNE1-204ENST00000574121 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
CCNE1-204ENST00000574121 TM4SF1P30408 202 aa20.1■□□□□ 0.81
CCNE1-204ENST00000574121 FLIIQ13045 1269 aa20.1■□□□□ 0.81
CCNE1-204ENST00000574121 SSH1Q8WYL5 1049 aa20.1■□□□□ 0.81
CCNE1-204ENST00000574121 ZBTB3Q9H5J0 574 aa20.1■□□□□ 0.81
CCNE1-204ENST00000574121 ATP10DQ9P241 1426 aa20.1■□□□□ 0.81
CCNE1-204ENST00000574121 MMP10P09238 476 aa20.09■□□□□ 0.81
CCNE1-204ENST00000574121 BRPF1P55201 1214 aaPredicted RBP20.09■□□□□ 0.81
CCNE1-204ENST00000574121 NFIXQ14938 502 aa20.09■□□□□ 0.81
CCNE1-204ENST00000574121 HLFQ16534 295 aa20.09■□□□□ 0.81
CCNE1-204ENST00000574121 HSP90AB3PQ58FF7 597 aa20.09■□□□□ 0.81
CCNE1-204ENST00000574121 CACNA1FO60840 1977 aa20.08■□□□□ 0.81
CCNE1-204ENST00000574121 RARSP54136 660 aaKnown RBP20.08■□□□□ 0.81
CCNE1-204ENST00000574121 TBC1D9BQ66K14 1250 aa20.08■□□□□ 0.81
CCNE1-204ENST00000574121 MRPL50Q8N5N7 158 aaKnown RBP20.08■□□□□ 0.81
CCNE1-204ENST00000574121 SMC4Q9NTJ3 1288 aa20.08■□□□□ 0.81
CCNE1-204ENST00000574121 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.8
CCNE1-204ENST00000574121 LRP5O75197 1615 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 KSR2Q6VAB6 950 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 G2E3Q7L622 706 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 SETDB2Q96T68 719 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 PARP3Q9Y6F1 533 aa20.07■□□□□ 0.8
CCNE1-204ENST00000574121 FKBP5Q13451 457 aaPredicted RBP20.06■□□□□ 0.8
CCNE1-204ENST00000574121 NIP7Q9Y221 180 aaKnown RBP eCLIP20.06■□□□□ 0.8
CCNE1-204ENST00000574121 PTPRCP08575 1304 aa20.05■□□□□ 0.8
CCNE1-204ENST00000574121 PI4KAP2A4QPH2 592 aa20.05■□□□□ 0.8
CCNE1-204ENST00000574121 POLRMTO00411 1230 aaKnown RBP20.05■□□□□ 0.8
CCNE1-204ENST00000574121 TCIRG1Q13488 830 aa20.05■□□□□ 0.8
CCNE1-204ENST00000574121 ZNF34Q8IZ26 560 aa20.05■□□□□ 0.8
CCNE1-204ENST00000574121 PI4KAP1Q8N8J0 262 aa20.05■□□□□ 0.8
CCNE1-204ENST00000574121 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
CCNE1-204ENST00000574121 DDR1Q08345 913 aa20.04■□□□□ 0.8
CCNE1-204ENST00000574121 PARP10Q53GL7 1025 aa20.04■□□□□ 0.8
CCNE1-204ENST00000574121 BCL2L13Q9BXK5 485 aa20.04■□□□□ 0.8
CCNE1-204ENST00000574121 TRIM28Q13263 835 aaKnown RBP20.03■□□□□ 0.8
CCNE1-204ENST00000574121 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
CCNE1-204ENST00000574121 METTL22Q9BUU2 404 aaPredicted RBP20.03■□□□□ 0.8
CCNE1-204ENST00000574121 MAP3K2Q9Y2U5 619 aa20.03■□□□□ 0.8
CCNE1-204ENST00000574121 ADCY9O60503 1353 aa20.03■□□□□ 0.8
CCNE1-204ENST00000574121 IBTKQ9P2D0 1353 aaPredicted RBP20.03■□□□□ 0.8
CCNE1-204ENST00000574121 SERPINB2P05120 415 aa20.02■□□□□ 0.8
CCNE1-204ENST00000574121 DNAAF4Q8WXU2 420 aa20.02■□□□□ 0.8
CCNE1-204ENST00000574121 NEXNQ0ZGT2 675 aa20.01■□□□□ 0.79
CCNE1-204ENST00000574121 ISCA1Q9BUE6 129 aa20.01■□□□□ 0.79
CCNE1-204ENST00000574121 NYXQ9GZU5 481 aa20.01■□□□□ 0.79
CCNE1-204ENST00000574121 PPP1R1BQ9UD71 204 aaPredicted RBP20.01■□□□□ 0.79
CCNE1-204ENST00000574121 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
CCNE1-204ENST00000574121 UBN2Q6ZU65 1347 aa20.01■□□□□ 0.79
CCNE1-204ENST00000574121 NUP98P52948 1817 aa20■□□□□ 0.79
CCNE1-204ENST00000574121 GPTP24298 496 aa20■□□□□ 0.79
CCNE1-204ENST00000574121 TPTE2Q6XPS3 522 aa20■□□□□ 0.79
CCNE1-204ENST00000574121 PPP1R42Q7Z4L9 355 aa20■□□□□ 0.79
CCNE1-204ENST00000574121 NBPF5PQ86XG9 351 aaPredicted RBP20■□□□□ 0.79
CCNE1-204ENST00000574121 ARHGAP45Q92619 1136 aa20■□□□□ 0.79
CCNE1-204ENST00000574121 ARFGEF2Q9Y6D5 1785 aa19.99■□□□□ 0.79
CCNE1-204ENST00000574121 IPO8O15397 1037 aaKnown RBP19.99■□□□□ 0.79
CCNE1-204ENST00000574121 NLRP10Q86W26 655 aa19.99■□□□□ 0.79
CCNE1-204ENST00000574121 CNBD1Q8NA66 436 aa19.99■□□□□ 0.79
CCNE1-204ENST00000574121 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
CCNE1-204ENST00000574121 CCDC191Q8NCU4 936 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 LINS1Q8NG48 757 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 MYD88Q99836 296 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 API5Q9BZZ5 524 aaKnown RBP19.98■□□□□ 0.79
CCNE1-204ENST00000574121 RCAN3Q9UKA8 241 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 NOB1Q9ULX3 412 aaKnown RBP19.98■□□□□ 0.79
CCNE1-204ENST00000574121 C10orf71Q711Q0 1435 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 NRXN2Q9P2S2 1712 aa19.98■□□□□ 0.79
CCNE1-204ENST00000574121 NPHP1O15259 732 aa19.97■□□□□ 0.79
CCNE1-204ENST00000574121 BCAR3O75815 825 aa19.97■□□□□ 0.79
CCNE1-204ENST00000574121 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
CCNE1-204ENST00000574121 UTP14AQ9BVJ6 771 aaKnown RBP19.97■□□□□ 0.79
CCNE1-204ENST00000574121 ANKRD36CQ5JPF3 1778 aa19.96■□□□□ 0.79
CCNE1-204ENST00000574121 ATP5J2-PTCD1G3V325 749 aa19.96■□□□□ 0.79
CCNE1-204ENST00000574121 NTSR2O95665 410 aa19.96■□□□□ 0.79
CCNE1-204ENST00000574121 ST5P78524 1137 aa19.96■□□□□ 0.79
CCNE1-204ENST00000574121 SUSD4Q5VX71 490 aa19.96■□□□□ 0.79
CCNE1-204ENST00000574121 PXDNLA1KZ92 1463 aa19.95■□□□□ 0.78
CCNE1-204ENST00000574121 F6X3S4 739 aa19.95■□□□□ 0.78
CCNE1-204ENST00000574121 IGKV5-2P06315 115 aa19.95■□□□□ 0.78
CCNE1-204ENST00000574121 CWC25Q9NXE8 425 aaPredicted RBP19.95■□□□□ 0.78
CCNE1-204ENST00000574121 RIC1Q4ADV7 1423 aa19.94■□□□□ 0.78
CCNE1-204ENST00000574121 NEURL1BA8MQ27 555 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms