RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 BCL2L12Q9HB09 334 aa16.42■□□□□ 0.22
TRAPPC1-206ENST00000573989 MAP3K15Q6ZN16 1313 aa16.42■□□□□ 0.22
TRAPPC1-206ENST00000573989 ANXA1P04083 346 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 TM4SF1P30408 202 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 AIMP1Q12904 312 aaKnown RBP16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 PROSER3Q2NL68 480 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 SETDB2Q96T68 719 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 SRCAPQ6ZRS2 3230 aa16.41■□□□□ 0.22
TRAPPC1-206ENST00000573989 NFIXQ14938 502 aa16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 BICDL1Q6ZP65 573 aa16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 TTLL7Q6ZT98 887 aa16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 XAGE3Q8WTP9 111 aa16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 FHDC1Q9C0D6 1143 aaPredicted RBP16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 CD2APQ9Y5K6 639 aa16.4■□□□□ 0.22
TRAPPC1-206ENST00000573989 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 NPHP1O15259 732 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 VAMP4O75379 141 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 HSP90AB3PQ58FF7 597 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 LRP10Q7Z4F1 713 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 ZBTB3Q9H5J0 574 aa16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.21
TRAPPC1-206ENST00000573989 POLRMTO00411 1230 aaKnown RBP16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 SERPINB2P05120 415 aa16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 GIGYF2Q6Y7W6 1299 aaKnown RBP16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 NIP7Q9Y221 180 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRAPPC1-206ENST00000573989 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 DDR1Q08345 913 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 HLFQ16534 295 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 ANKRD13DQ6ZTN6 518 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 PLBD2Q8NHP8 589 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 KIF13BQ9NQT8 1826 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 ZBED9Q6R2W3 1325 aa16.37■□□□□ 0.21
TRAPPC1-206ENST00000573989 NRXN2Q9P2S2 1712 aa16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 SLC4A2P04920 1241 aa16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 CT47B1P0C2W7 299 aaPredicted RBP16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 ZNF428Q96B54 188 aa16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 ATP10DQ9P241 1426 aa16.36■□□□□ 0.21
TRAPPC1-206ENST00000573989 ST5P78524 1137 aa16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 PARP10Q53GL7 1025 aa16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 TPTE2Q6XPS3 522 aa16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 RIC3Q7Z5B4 369 aa16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 TRMT2AQ8IZ69 625 aaKnown RBP16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 NYXQ9GZU5 481 aa16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 PHAXQ9H814 394 aaKnown RBP16.35■□□□□ 0.21
TRAPPC1-206ENST00000573989 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
TRAPPC1-206ENST00000573989 TGFB2P61812 414 aa16.34■□□□□ 0.21
TRAPPC1-206ENST00000573989 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
TRAPPC1-206ENST00000573989 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
TRAPPC1-206ENST00000573989 ARFGEF2Q9Y6D5 1785 aa16.33■□□□□ 0.21
TRAPPC1-206ENST00000573989 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
TRAPPC1-206ENST00000573989 PPP1R42Q7Z4L9 355 aa16.33■□□□□ 0.2
TRAPPC1-206ENST00000573989 GPTP24298 496 aa16.32■□□□□ 0.2
TRAPPC1-206ENST00000573989 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
TRAPPC1-206ENST00000573989 ZNF34Q8IZ26 560 aa16.32■□□□□ 0.2
TRAPPC1-206ENST00000573989 PDZRN3Q9UPQ7 1066 aa16.32■□□□□ 0.2
TRAPPC1-206ENST00000573989 IBTKQ9P2D0 1353 aaPredicted RBP16.31■□□□□ 0.2
TRAPPC1-206ENST00000573989 FLIIQ13045 1269 aa16.31■□□□□ 0.2
TRAPPC1-206ENST00000573989 PRR5LQ6MZQ0 368 aa16.31■□□□□ 0.2
TRAPPC1-206ENST00000573989 KSR2Q6VAB6 950 aa16.31■□□□□ 0.2
TRAPPC1-206ENST00000573989 FAM177BA6PVY3 158 aa16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 PDE6BP35913 854 aa16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 NEXNQ0ZGT2 675 aa16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 FKBP5Q13451 457 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 ALDH1L2Q3SY69 923 aa16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 N4BP2Q86UW6 1770 aaPredicted RBP16.3■□□□□ 0.2
TRAPPC1-206ENST00000573989 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
TRAPPC1-206ENST00000573989 NLGN2Q8NFZ4 835 aa16.29■□□□□ 0.2
TRAPPC1-206ENST00000573989 BRIP1Q9BX63 1249 aa16.29■□□□□ 0.2
TRAPPC1-206ENST00000573989 MAP3K2Q9Y2U5 619 aa16.29■□□□□ 0.2
TRAPPC1-206ENST00000573989 UBN2Q6ZU65 1347 aa16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 PI4KAP2A4QPH2 592 aa16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 NLRP10Q86W26 655 aa16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 PI4KAP1Q8N8J0 262 aa16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 METTL22Q9BUU2 404 aaPredicted RBP16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
TRAPPC1-206ENST00000573989 H0YIN7 160 aa16.27■□□□□ 0.2
TRAPPC1-206ENST00000573989 TRIM28Q13263 835 aaKnown RBP16.27■□□□□ 0.2
TRAPPC1-206ENST00000573989 SUSD4Q5VX71 490 aa16.27■□□□□ 0.2
TRAPPC1-206ENST00000573989 G2E3Q7L622 706 aa16.27■□□□□ 0.2
TRAPPC1-206ENST00000573989 MYD88Q99836 296 aa16.27■□□□□ 0.2
TRAPPC1-206ENST00000573989 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
TRAPPC1-206ENST00000573989 ANKRD31Q8N7Z5 1873 aa16.27■□□□□ 0.19
TRAPPC1-206ENST00000573989 A0A0G2JLW4 131 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 HSP90B1P14625 803 aaKnown RBP16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 DPEP1P16444 411 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 GPR162Q16538 588 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 PELP1Q8IZL8 1130 aaKnown RBP16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 ISCA1Q9BUE6 129 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 TRMT112Q9UI30 125 aaKnown RBP16.26■□□□□ 0.19
TRAPPC1-206ENST00000573989 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms