RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 KIF6Q6ZMV9 814 aa17.24■□□□□ 0.35
LINC01996-201ENST00000573270 DZIP3Q86Y13 1208 aaKnown RBP17.24■□□□□ 0.35
LINC01996-201ENST00000573270 ZBTB3Q9H5J0 574 aa17.24■□□□□ 0.35
LINC01996-201ENST00000573270 TFCP2L1Q9NZI6 479 aa17.24■□□□□ 0.35
LINC01996-201ENST00000573270 PTPRCP08575 1304 aa17.23■□□□□ 0.35
LINC01996-201ENST00000573270 PLIN1O60240 522 aa17.23■□□□□ 0.35
LINC01996-201ENST00000573270 SLC15A2Q16348 729 aa17.23■□□□□ 0.35
LINC01996-201ENST00000573270 SRP68Q9UHB9 627 aaKnown RBP17.23■□□□□ 0.35
LINC01996-201ENST00000573270 MAP3K15Q6ZN16 1313 aa17.22■□□□□ 0.35
LINC01996-201ENST00000573270 HMGB2P26583 209 aaKnown RBP17.22■□□□□ 0.35
LINC01996-201ENST00000573270 NPM2Q86SE8 214 aaKnown RBP17.22■□□□□ 0.35
LINC01996-201ENST00000573270 ARXQ96QS3 562 aa17.22■□□□□ 0.35
LINC01996-201ENST00000573270 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
LINC01996-201ENST00000573270 USP42Q9H9J4 1324 aaKnown RBP17.21■□□□□ 0.35
LINC01996-201ENST00000573270 LAMB2P55268 1798 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 A0A087WZG4 1122 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 F6X3S4 739 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 CAMTA2O94983 1202 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 TRIM27P14373 513 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
LINC01996-201ENST00000573270 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
LINC01996-201ENST00000573270 ABCC4O15439 1325 aa17.21■□□□□ 0.34
LINC01996-201ENST00000573270 PI4KAP2A4QPH2 592 aa17.2■□□□□ 0.34
LINC01996-201ENST00000573270 DDX58O95786 925 aaKnown RBP17.2■□□□□ 0.34
LINC01996-201ENST00000573270 PI4KAP1Q8N8J0 262 aa17.2■□□□□ 0.34
LINC01996-201ENST00000573270 SUPT16HQ9Y5B9 1047 aaKnown RBP17.2■□□□□ 0.34
LINC01996-201ENST00000573270 ATP10DQ9P241 1426 aa17.2■□□□□ 0.34
LINC01996-201ENST00000573270 TRAPPC3LQ5T215 181 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 USPL1Q5W0Q7 1092 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 ATF7IPQ6VMQ6 1270 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
LINC01996-201ENST00000573270 PLBD2Q8NHP8 589 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 CLUAP1Q96AJ1 413 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 API5Q9BZZ5 524 aaKnown RBP17.19■□□□□ 0.34
LINC01996-201ENST00000573270 MAP3K2Q9Y2U5 619 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 RNF123Q5XPI4 1314 aa17.19■□□□□ 0.34
LINC01996-201ENST00000573270 RFC4P35249 363 aa17.18■□□□□ 0.34
LINC01996-201ENST00000573270 HLFQ16534 295 aa17.18■□□□□ 0.34
LINC01996-201ENST00000573270 KSR2Q6VAB6 950 aa17.18■□□□□ 0.34
LINC01996-201ENST00000573270 RIC3Q7Z5B4 369 aa17.18■□□□□ 0.34
LINC01996-201ENST00000573270 DNAAF4Q8WXU2 420 aa17.18■□□□□ 0.34
LINC01996-201ENST00000573270 IPO8O15397 1037 aaKnown RBP17.17■□□□□ 0.34
LINC01996-201ENST00000573270 C20orf194Q5TEA3 1177 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 SLC4A10Q6U841 1118 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 ANKRD13DQ6ZTN6 518 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 FTSJ3Q8IY81 847 aaKnown RBP17.17■□□□□ 0.34
LINC01996-201ENST00000573270 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.17■□□□□ 0.34
LINC01996-201ENST00000573270 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 BCL2L12Q9HB09 334 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 NARFQ9UHQ1 456 aa17.17■□□□□ 0.34
LINC01996-201ENST00000573270 ZPR1O75312 459 aa17.16■□□□□ 0.34
LINC01996-201ENST00000573270 RLBP1P12271 317 aa17.16■□□□□ 0.34
LINC01996-201ENST00000573270 R3HDM1Q15032 1099 aaKnown RBP17.16■□□□□ 0.34
LINC01996-201ENST00000573270 MYD88Q99836 296 aa17.16■□□□□ 0.34
LINC01996-201ENST00000573270 PDGFDQ9GZP0 370 aaPredicted RBP17.16■□□□□ 0.34
LINC01996-201ENST00000573270 DDX60Q8IY21 1712 aaKnown RBP17.16■□□□□ 0.34
LINC01996-201ENST00000573270 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
LINC01996-201ENST00000573270 ERVV-1B6SEH8 477 aa17.15■□□□□ 0.34
LINC01996-201ENST00000573270 GIGYF2Q6Y7W6 1299 aaKnown RBP17.15■□□□□ 0.34
LINC01996-201ENST00000573270 FLAD1Q8NFF5 587 aa17.15■□□□□ 0.34
LINC01996-201ENST00000573270 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
LINC01996-201ENST00000573270 METTL22Q9BUU2 404 aaPredicted RBP17.15■□□□□ 0.34
LINC01996-201ENST00000573270 TNRC6CQ9HCJ0 1690 aaKnown RBP17.15■□□□□ 0.34
LINC01996-201ENST00000573270 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
LINC01996-201ENST00000573270 GYS1P13807 737 aa17.14■□□□□ 0.33
LINC01996-201ENST00000573270 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
LINC01996-201ENST00000573270 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
LINC01996-201ENST00000573270 TMEM57Q8N5G2 664 aa17.14■□□□□ 0.33
LINC01996-201ENST00000573270 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
LINC01996-201ENST00000573270 UBN2Q6ZU65 1347 aa17.14■□□□□ 0.33
LINC01996-201ENST00000573270 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
LINC01996-201ENST00000573270 GPTP24298 496 aa17.13■□□□□ 0.33
LINC01996-201ENST00000573270 FKBP8Q14318 412 aa17.13■□□□□ 0.33
LINC01996-201ENST00000573270 CWF19L2Q2TBE0 894 aaKnown RBP17.13■□□□□ 0.33
LINC01996-201ENST00000573270 IGKV5-2P06315 115 aa17.12■□□□□ 0.33
LINC01996-201ENST00000573270 IRX6P78412 446 aaPredicted RBP17.12■□□□□ 0.33
LINC01996-201ENST00000573270 NEXNQ0ZGT2 675 aa17.12■□□□□ 0.33
LINC01996-201ENST00000573270 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
LINC01996-201ENST00000573270 TBC1D9BQ66K14 1250 aa17.12■□□□□ 0.33
LINC01996-201ENST00000573270 ITPRIPQ8IWB1 547 aa17.12■□□□□ 0.33
LINC01996-201ENST00000573270 HSP90AB3PQ58FF7 597 aa17.11■□□□□ 0.33
LINC01996-201ENST00000573270 BICDL1Q6ZP65 573 aa17.11■□□□□ 0.33
LINC01996-201ENST00000573270 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
LINC01996-201ENST00000573270 MYH3P11055 1940 aa17.11■□□□□ 0.33
LINC01996-201ENST00000573270 CARMIL3Q8ND23 1372 aa17.11■□□□□ 0.33
LINC01996-201ENST00000573270 ANKRD31Q8N7Z5 1873 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 NEURL1BA8MQ27 555 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 RGL2O15211 777 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 CCT4P50991 539 aaKnown RBP17.1■□□□□ 0.33
LINC01996-201ENST00000573270 TCIRG1Q13488 830 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 LINS1Q8NG48 757 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 ISCA1Q9BUE6 129 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 NIP7Q9Y221 180 aaKnown RBP eCLIP17.1■□□□□ 0.33
LINC01996-201ENST00000573270 COG6Q9Y2V7 657 aa17.1■□□□□ 0.33
LINC01996-201ENST00000573270 COL11A2P13942 1736 aaPredicted RBP17.1■□□□□ 0.33
LINC01996-201ENST00000573270 PDE3AQ14432 1141 aa17.09■□□□□ 0.33
LINC01996-201ENST00000573270 MVPQ14764 893 aaKnown RBP17.09■□□□□ 0.33
LINC01996-201ENST00000573270 CLEC4GQ6UXB4 293 aa17.09■□□□□ 0.33
LINC01996-201ENST00000573270 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
LINC01996-201ENST00000573270 IBTKQ9P2D0 1353 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms