RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 DOC2BQ14184 412 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 MCM6Q14566 821 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 C1orf53Q5VUE5 145 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 LRRC69Q6ZNQ3 347 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.85□□□□□ -1.31
TVP23B-205ENST00000572845 TNFRSF25Q93038 417 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 STRN4Q9NRL3 753 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 PARP3Q9Y6F1 533 aa6.85□□□□□ -1.31
TVP23B-205ENST00000572845 PIK3CDO00329 1044 aa6.84□□□□□ -1.31
TVP23B-205ENST00000572845 ATP1A2P50993 1020 aa6.84□□□□□ -1.31
TVP23B-205ENST00000572845 TRIM28Q13263 835 aaKnown RBP6.84□□□□□ -1.31
TVP23B-205ENST00000572845 NCOA4Q13772 614 aa6.84□□□□□ -1.31
TVP23B-205ENST00000572845 SLC9A9Q8IVB4 645 aa6.84□□□□□ -1.31
TVP23B-205ENST00000572845 MDFIQ99750 246 aa6.84□□□□□ -1.31
TVP23B-205ENST00000572845 EPHA4P54764 986 aa6.83□□□□□ -1.32
TVP23B-205ENST00000572845 TPRNQ4KMQ1 711 aa6.83□□□□□ -1.32
TVP23B-205ENST00000572845 ZDHHC1Q8WTX9 485 aa6.83□□□□□ -1.32
TVP23B-205ENST00000572845 COG6Q9Y2V7 657 aa6.83□□□□□ -1.32
TVP23B-205ENST00000572845 RAD21O60216 631 aa6.82□□□□□ -1.32
TVP23B-205ENST00000572845 PSMA6P60900 246 aaKnown RBP6.82□□□□□ -1.32
TVP23B-205ENST00000572845 RHPN1Q8TCX5 695 aa6.82□□□□□ -1.32
TVP23B-205ENST00000572845 C7orf43Q8WVR3 580 aa6.82□□□□□ -1.32
TVP23B-205ENST00000572845 EFCC1Q9HA90 598 aa6.82□□□□□ -1.32
TVP23B-205ENST00000572845 USP17L5A8MUK1 530 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 M0R082 166 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 M0R2N6 131 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 HIRAP54198 1017 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-205ENST00000572845 KCNQ4P56696 695 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 HIF1AQ16665 826 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 ZMYM1Q5SVZ6 1142 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 TNS4Q8IZW8 715 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 ZNF417Q8TAU3 575 aa6.81□□□□□ -1.32
TVP23B-205ENST00000572845 ZNF587Q96SQ5 575 aaPredicted RBP6.81□□□□□ -1.32
TVP23B-205ENST00000572845 SPEM2Q0P670 501 aa6.8□□□□□ -1.32
TVP23B-205ENST00000572845 SFSWAPQ12872 951 aaKnown RBP6.8□□□□□ -1.32
TVP23B-205ENST00000572845 PLEKHM2Q8IWE5 1019 aa6.8□□□□□ -1.32
TVP23B-205ENST00000572845 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
TVP23B-205ENST00000572845 CEP63Q96MT8 703 aa6.8□□□□□ -1.32
TVP23B-205ENST00000572845 RBM19Q9Y4C8 960 aaKnown RBP6.8□□□□□ -1.32
TVP23B-205ENST00000572845 C9orf172C9J069 976 aa6.79□□□□□ -1.32
TVP23B-205ENST00000572845 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
TVP23B-205ENST00000572845 CCDC102BQ68D86 513 aa6.79□□□□□ -1.32
TVP23B-205ENST00000572845 LARGE2Q8N3Y3 721 aa6.79□□□□□ -1.32
TVP23B-205ENST00000572845 BRD7Q9NPI1 651 aa6.79□□□□□ -1.32
TVP23B-205ENST00000572845 KCNH4Q9UQ05 1017 aa6.79□□□□□ -1.32
TVP23B-205ENST00000572845 PALM3A6NDB9 673 aaPredicted RBP6.78□□□□□ -1.32
TVP23B-205ENST00000572845 ZBTB7BO15156 539 aaPredicted RBP6.78□□□□□ -1.32
TVP23B-205ENST00000572845 ADH7P40394 386 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 NKAPLQ5M9Q1 402 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 POTEAQ6S8J7 498 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 TPCN2Q8NHX9 752 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 GAS2L2Q8NHY3 880 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
TVP23B-205ENST00000572845 SFI1A8K8P3 1242 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 LILRB5O75023 590 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 ITGB7P26010 798 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 COL9A3Q14050 684 aaPredicted RBP6.77□□□□□ -1.33
TVP23B-205ENST00000572845 TBCELQ5QJ74 424 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 DEPDC4Q8N2C3 294 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 TPSG1Q9NRR2 321 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 STARD13Q9Y3M8 1113 aa6.77□□□□□ -1.33
TVP23B-205ENST00000572845 ALBP02768 609 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 NID1P14543 1247 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 NRG1Q02297 640 aaPredicted RBP6.76□□□□□ -1.33
TVP23B-205ENST00000572845 TRAPPC3LQ5T215 181 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 C20orf204Q6ZNR8 217 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 STAG2Q8N3U4 1231 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 PHACTR1Q9C0D0 580 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 HCN4Q9Y3Q4 1203 aa6.76□□□□□ -1.33
TVP23B-205ENST00000572845 USP17L3A6NCW0 530 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 USP17L4A6NCW7 530 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 FLIIQ13045 1269 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 USP17L2Q6R6M4 530 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 USP17L1Q7RTZ2 530 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 SUSD3Q96L08 255 aa6.75□□□□□ -1.33
TVP23B-205ENST00000572845 TSPAN10Q9H1Z9 355 aaPredicted RBP6.75□□□□□ -1.33
TVP23B-205ENST00000572845 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 DYRK3O43781 588 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 PPP1R12BO60237 982 aaPredicted RBP6.74□□□□□ -1.33
TVP23B-205ENST00000572845 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 H2AFB2P0C5Z0 115 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 ELNP15502 786 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 RAC1P63000 192 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 TYRO3Q06418 890 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 PCSK7Q16549 785 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 OGFOD1Q8N543 542 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 PSMG3-AS1Q96PY0 264 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
TVP23B-205ENST00000572845 ATP9BO43861 1147 aa6.73□□□□□ -1.33
TVP23B-205ENST00000572845 CLDN10P78369 228 aa6.73□□□□□ -1.33
TVP23B-205ENST00000572845 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
TVP23B-205ENST00000572845 SIX5Q8N196 739 aa6.73□□□□□ -1.33
TVP23B-205ENST00000572845 BHMTQ93088 406 aa6.73□□□□□ -1.33
TVP23B-205ENST00000572845 MKRN1Q9UHC7 482 aaKnown RBP6.73□□□□□ -1.33
TVP23B-205ENST00000572845 ATAD2Q6PL18 1390 aa6.72□□□□□ -1.33
TVP23B-205ENST00000572845 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
TVP23B-205ENST00000572845 UBTFP17480 764 aaKnown RBP6.72□□□□□ -1.33
TVP23B-205ENST00000572845 GRIK4Q16099 956 aa6.72□□□□□ -1.33
TVP23B-205ENST00000572845 HDGFL1Q5TGJ6 251 aa6.72□□□□□ -1.33
TVP23B-205ENST00000572845 BTLAQ7Z6A9 289 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms