RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 CNKSR1Q969H4 720 aa22.57■■□□□ 1.2
ATP2A3-212ENST00000572694 CCDC88AQ3V6T2 1871 aa22.56■■□□□ 1.2
ATP2A3-212ENST00000572694 NFKBIEO00221 500 aa22.56■■□□□ 1.2
ATP2A3-212ENST00000572694 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
ATP2A3-212ENST00000572694 CCDC24Q8N4L8 307 aa22.56■■□□□ 1.2
ATP2A3-212ENST00000572694 RRAGCQ9HB90 399 aa22.56■■□□□ 1.2
ATP2A3-212ENST00000572694 GLTPD2A6NH11 291 aa22.55■■□□□ 1.2
ATP2A3-212ENST00000572694 NPHP1O15259 732 aa22.55■■□□□ 1.2
ATP2A3-212ENST00000572694 FSTL1Q12841 308 aa22.55■■□□□ 1.2
ATP2A3-212ENST00000572694 TPTE2Q6XPS3 522 aa22.55■■□□□ 1.2
ATP2A3-212ENST00000572694 MASTLQ96GX5 879 aa22.55■■□□□ 1.2
ATP2A3-212ENST00000572694 KLRG2A4D1S0 409 aaPredicted RBP22.54■■□□□ 1.2
ATP2A3-212ENST00000572694 EIF4A1P60842 406 aaKnown RBP22.54■■□□□ 1.2
ATP2A3-212ENST00000572694 NBPF5PQ86XG9 351 aaPredicted RBP22.54■■□□□ 1.2
ATP2A3-212ENST00000572694 C21orf2O43822 256 aa22.53■■□□□ 1.2
ATP2A3-212ENST00000572694 MAPK8IP3Q9UPT6 1336 aa22.53■■□□□ 1.2
ATP2A3-212ENST00000572694 KDM3BQ7LBC6 1761 aa22.53■■□□□ 1.2
ATP2A3-212ENST00000572694 FER1L6Q2WGJ9 1857 aa22.52■■□□□ 1.2
ATP2A3-212ENST00000572694 SOGA3Q5TF21 947 aa22.52■■□□□ 1.2
ATP2A3-212ENST00000572694 NIP7Q9Y221 180 aaKnown RBP eCLIP22.52■■□□□ 1.2
ATP2A3-212ENST00000572694 LTBP3Q9NS15 1303 aa22.52■■□□□ 1.2
ATP2A3-212ENST00000572694 TNRC6CQ9HCJ0 1690 aaKnown RBP22.52■■□□□ 1.2
ATP2A3-212ENST00000572694 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
ATP2A3-212ENST00000572694 ERVV-1B6SEH8 477 aa22.51■■□□□ 1.19
ATP2A3-212ENST00000572694 SLX4Q8IY92 1834 aa22.5■■□□□ 1.19
ATP2A3-212ENST00000572694 VEGFAP15692 232 aaPredicted RBP22.5■■□□□ 1.19
ATP2A3-212ENST00000572694 HLFQ16534 295 aa22.5■■□□□ 1.19
ATP2A3-212ENST00000572694 DNAJC5GQ8N7S2 189 aa22.5■■□□□ 1.19
ATP2A3-212ENST00000572694 DICER1Q9UPY3 1922 aaKnown RBP22.5■■□□□ 1.19
ATP2A3-212ENST00000572694 LAMB4A4D0S4 1761 aa22.49■■□□□ 1.19
ATP2A3-212ENST00000572694 DPY19L2Q6NUT2 758 aa22.49■■□□□ 1.19
ATP2A3-212ENST00000572694 PRPF40BQ6NWY9 871 aaKnown RBP22.49■■□□□ 1.19
ATP2A3-212ENST00000572694 C7orf43Q8WVR3 580 aa22.49■■□□□ 1.19
ATP2A3-212ENST00000572694 BABAM1Q9NWV8 329 aa22.49■■□□□ 1.19
ATP2A3-212ENST00000572694 NPR1P16066 1061 aa22.48■■□□□ 1.19
ATP2A3-212ENST00000572694 THUMPD2Q9BTF0 503 aaKnown RBP22.48■■□□□ 1.19
ATP2A3-212ENST00000572694 RIPK4P57078 832 aa22.47■■□□□ 1.19
ATP2A3-212ENST00000572694 TAOK3Q9H2K8 898 aa22.47■■□□□ 1.19
ATP2A3-212ENST00000572694 ZNF219Q9P2Y4 722 aaPredicted RBP22.47■■□□□ 1.19
ATP2A3-212ENST00000572694 ERBB4Q15303 1308 aa22.47■■□□□ 1.19
ATP2A3-212ENST00000572694 ARFGEF2Q9Y6D5 1785 aa22.47■■□□□ 1.19
ATP2A3-212ENST00000572694 ERFEQ4G0M1 354 aa22.46■■□□□ 1.19
ATP2A3-212ENST00000572694 SMC1BQ8NDV3 1235 aa22.46■■□□□ 1.19
ATP2A3-212ENST00000572694 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
ATP2A3-212ENST00000572694 MAP3K15Q6ZN16 1313 aa22.46■■□□□ 1.19
ATP2A3-212ENST00000572694 DDX10Q13206 875 aaKnown RBP22.45■■□□□ 1.18
ATP2A3-212ENST00000572694 NYXQ9GZU5 481 aa22.45■■□□□ 1.18
ATP2A3-212ENST00000572694 NUP98P52948 1817 aa22.45■■□□□ 1.18
ATP2A3-212ENST00000572694 POTECB2RU33 542 aa22.44■■□□□ 1.18
ATP2A3-212ENST00000572694 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
ATP2A3-212ENST00000572694 MYBBP1AQ9BQG0 1328 aaKnown RBP22.44■■□□□ 1.18
ATP2A3-212ENST00000572694 TIAM2Q8IVF5 1701 aa22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 GTF2E1P29083 439 aaPredicted RBP22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 ALDH1B1P30837 517 aa22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 LMOD3Q0VAK6 560 aa22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 NGEFQ8N5V2 710 aa22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 TSPYL4Q9UJ04 414 aa22.43■■□□□ 1.18
ATP2A3-212ENST00000572694 KIF6Q6ZMV9 814 aa22.42■■□□□ 1.18
ATP2A3-212ENST00000572694 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
ATP2A3-212ENST00000572694 CACNA1SQ13698 1873 aa22.42■■□□□ 1.18
ATP2A3-212ENST00000572694 WDR90Q96KV7 1748 aa22.42■■□□□ 1.18
ATP2A3-212ENST00000572694 FAM177BA6PVY3 158 aa22.41■■□□□ 1.18
ATP2A3-212ENST00000572694 MYL6BP14649 208 aa22.41■■□□□ 1.18
ATP2A3-212ENST00000572694 CRY2Q49AN0 593 aa22.41■■□□□ 1.18
ATP2A3-212ENST00000572694 CCDC93Q567U6 631 aa22.41■■□□□ 1.18
ATP2A3-212ENST00000572694 GIGYF2Q6Y7W6 1299 aaKnown RBP22.4■■□□□ 1.18
ATP2A3-212ENST00000572694 ZNF34Q8IZ26 560 aa22.4■■□□□ 1.18
ATP2A3-212ENST00000572694 RTKN2Q8IZC4 609 aa22.4■■□□□ 1.18
ATP2A3-212ENST00000572694 PDIA6Q15084 440 aa22.39■■□□□ 1.17
ATP2A3-212ENST00000572694 LRP10Q7Z4F1 713 aa22.39■■□□□ 1.17
ATP2A3-212ENST00000572694 IBTKQ9P2D0 1353 aaPredicted RBP22.38■■□□□ 1.17
ATP2A3-212ENST00000572694 FKBP4Q02790 459 aaKnown RBP eCLIP22.38■■□□□ 1.17
ATP2A3-212ENST00000572694 ZBTB3Q9H5J0 574 aa22.37■■□□□ 1.17
ATP2A3-212ENST00000572694 RIC1Q4ADV7 1423 aa22.37■■□□□ 1.17
ATP2A3-212ENST00000572694 CHL1O00533 1208 aa22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 HOXA10P31260 410 aaPredicted RBP22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 SUSD4Q5VX71 490 aa22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 NUTM1Q86Y26 1132 aa22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 RUNDC1Q96C34 613 aa22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 KLRG1Q96E93 195 aa22.36■■□□□ 1.17
ATP2A3-212ENST00000572694 UBN2Q6ZU65 1347 aa22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 DDNO94850 711 aaPredicted RBP22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 EIF2S2P20042 333 aaKnown RBP22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 PARP10Q53GL7 1025 aa22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 CC2D2BQ6DHV5 1058 aa22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 PPP1R42Q7Z4L9 355 aa22.35■■□□□ 1.17
ATP2A3-212ENST00000572694 GPTP24298 496 aa22.34■■□□□ 1.17
ATP2A3-212ENST00000572694 GRIPAP1Q4V328 841 aa22.34■■□□□ 1.17
ATP2A3-212ENST00000572694 JMYQ8N9B5 988 aa22.34■■□□□ 1.17
ATP2A3-212ENST00000572694 HTRA3P83110 453 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 WDR43Q15061 677 aaKnown RBP eCLIP22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 SLC10A5Q5PT55 438 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 IFFO2Q5TF58 517 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 L3MBTL3Q96JM7 780 aaPredicted RBP22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 PSMD1Q99460 953 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 TRIM35Q9UPQ4 493 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 ABCC12Q96J65 1359 aa22.33■■□□□ 1.17
ATP2A3-212ENST00000572694 NTSR2O95665 410 aa22.32■■□□□ 1.16
ATP2A3-212ENST00000572694 CCDC146Q8IYE0 955 aa22.32■■□□□ 1.16
ATP2A3-212ENST00000572694 CRAMP1Q96RY5 1269 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms