RNA–Protein interactions for RNA: ENST00000572603.1

RAB40B-207, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-207ENST00000572603 ZPR1O75312 459 aa28.34■■■□□ 2.13
RAB40B-207ENST00000572603 FKBP8Q14318 412 aa28.34■■■□□ 2.13
RAB40B-207ENST00000572603 G2E3Q7L622 706 aa28.34■■■□□ 2.13
RAB40B-207ENST00000572603 NPM2Q86SE8 214 aaKnown RBP28.34■■■□□ 2.13
RAB40B-207ENST00000572603 ZNF428Q96B54 188 aa28.34■■■□□ 2.13
RAB40B-207ENST00000572603 NRXN2Q9P2S2 1712 aa28.33■■■□□ 2.13
RAB40B-207ENST00000572603 SSH1Q8WYL5 1049 aa28.33■■■□□ 2.13
RAB40B-207ENST00000572603 SGIP1Q9BQI5 828 aa28.33■■■□□ 2.13
RAB40B-207ENST00000572603 AFDNP55196 1824 aaKnown RBP28.33■■■□□ 2.13
RAB40B-207ENST00000572603 RGL2O15211 777 aa28.32■■■□□ 2.12
RAB40B-207ENST00000572603 SLC4A2P04920 1241 aa28.32■■■□□ 2.12
RAB40B-207ENST00000572603 AIMP1Q12904 312 aaKnown RBP28.32■■■□□ 2.12
RAB40B-207ENST00000572603 KIF6Q6ZMV9 814 aa28.32■■■□□ 2.12
RAB40B-207ENST00000572603 ERVV-1B6SEH8 477 aa28.31■■■□□ 2.12
RAB40B-207ENST00000572603 HLFQ16534 295 aa28.31■■■□□ 2.12
RAB40B-207ENST00000572603 ZBTB3Q9H5J0 574 aa28.31■■■□□ 2.12
RAB40B-207ENST00000572603 ATF5Q9Y2D1 282 aaPredicted RBP28.31■■■□□ 2.12
RAB40B-207ENST00000572603 ATP10DQ9P241 1426 aa28.3■■■□□ 2.12
RAB40B-207ENST00000572603 PTGER2P43116 358 aa28.3■■■□□ 2.12
RAB40B-207ENST00000572603 ALDH1L2Q3SY69 923 aa28.3■■■□□ 2.12
RAB40B-207ENST00000572603 MRPL50Q8N5N7 158 aaKnown RBP28.3■■■□□ 2.12
RAB40B-207ENST00000572603 ARXQ96QS3 562 aa28.3■■■□□ 2.12
RAB40B-207ENST00000572603 NLGN1Q8N2Q7 840 aa28.29■■■□□ 2.12
RAB40B-207ENST00000572603 ADCY9O60503 1353 aa28.28■■■□□ 2.12
RAB40B-207ENST00000572603 RARSP54136 660 aaKnown RBP28.28■■■□□ 2.12
RAB40B-207ENST00000572603 FLIIQ13045 1269 aa28.28■■■□□ 2.12
RAB40B-207ENST00000572603 BCL2L13Q9BXK5 485 aa28.28■■■□□ 2.12
RAB40B-207ENST00000572603 TBC1D9BQ66K14 1250 aa28.27■■■□□ 2.12
RAB40B-207ENST00000572603 CLEC4GQ6UXB4 293 aa28.27■■■□□ 2.12
RAB40B-207ENST00000572603 GIGYF2Q6Y7W6 1299 aaKnown RBP28.27■■■□□ 2.12
RAB40B-207ENST00000572603 PLBD2Q8NHP8 589 aa28.27■■■□□ 2.12
RAB40B-207ENST00000572603 TM4SF1P30408 202 aa28.26■■■□□ 2.11
RAB40B-207ENST00000572603 DDR1Q08345 913 aa28.26■■■□□ 2.11
RAB40B-207ENST00000572603 NFIXQ14938 502 aa28.26■■■□□ 2.11
RAB40B-207ENST00000572603 SPON1Q9HCB6 807 aa28.26■■■□□ 2.11
RAB40B-207ENST00000572603 N4BP2Q86UW6 1770 aaPredicted RBP28.26■■■□□ 2.11
RAB40B-207ENST00000572603 SMC4Q9NTJ3 1288 aa28.25■■■□□ 2.11
RAB40B-207ENST00000572603 ZNF652Q9Y2D9 606 aa28.25■■■□□ 2.11
RAB40B-207ENST00000572603 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
RAB40B-207ENST00000572603 MMP10P09238 476 aa28.24■■■□□ 2.11
RAB40B-207ENST00000572603 ANKRD13DQ6ZTN6 518 aa28.24■■■□□ 2.11
RAB40B-207ENST00000572603 BRPF1P55201 1214 aaPredicted RBP28.23■■■□□ 2.11
RAB40B-207ENST00000572603 POLRMTO00411 1230 aaKnown RBP28.22■■■□□ 2.11
RAB40B-207ENST00000572603 UBN2Q6ZU65 1347 aa28.21■■■□□ 2.11
RAB40B-207ENST00000572603 KSR2Q6VAB6 950 aa28.21■■■□□ 2.11
RAB40B-207ENST00000572603 CARMIL3Q8ND23 1372 aa28.21■■■□□ 2.11
RAB40B-207ENST00000572603 PI4KAP2A4QPH2 592 aa28.2■■■□□ 2.1
RAB40B-207ENST00000572603 DDX58O95786 925 aaKnown RBP28.2■■■□□ 2.1
RAB40B-207ENST00000572603 FKBP5Q13451 457 aaPredicted RBP28.2■■■□□ 2.1
RAB40B-207ENST00000572603 BICDL1Q6ZP65 573 aa28.2■■■□□ 2.1
RAB40B-207ENST00000572603 ZNF34Q8IZ26 560 aa28.2■■■□□ 2.1
RAB40B-207ENST00000572603 PI4KAP1Q8N8J0 262 aa28.2■■■□□ 2.1
RAB40B-207ENST00000572603 ANKRD31Q8N7Z5 1873 aa28.2■■■□□ 2.1
RAB40B-207ENST00000572603 KIAA1551Q9HCM1 1747 aa28.19■■■□□ 2.1
RAB40B-207ENST00000572603 POLD1P28340 1107 aa28.19■■■□□ 2.1
RAB40B-207ENST00000572603 RIC3Q7Z5B4 369 aa28.19■■■□□ 2.1
RAB40B-207ENST00000572603 MAP3K2Q9Y2U5 619 aa28.19■■■□□ 2.1
RAB40B-207ENST00000572603 BCAR3O75815 825 aa28.18■■■□□ 2.1
RAB40B-207ENST00000572603 TCIRG1Q13488 830 aa28.18■■■□□ 2.1
RAB40B-207ENST00000572603 NIP7Q9Y221 180 aaKnown RBP eCLIP28.18■■■□□ 2.1
RAB40B-207ENST00000572603 C10orf71Q711Q0 1435 aa28.18■■■□□ 2.1
RAB40B-207ENST00000572603 GPTP24298 496 aa28.17■■■□□ 2.1
RAB40B-207ENST00000572603 HSP90AB3PQ58FF7 597 aa28.17■■■□□ 2.1
RAB40B-207ENST00000572603 ISCA1Q9BUE6 129 aa28.17■■■□□ 2.1
RAB40B-207ENST00000572603 PTPRCP08575 1304 aa28.17■■■□□ 2.1
RAB40B-207ENST00000572603 IBTKQ9P2D0 1353 aaPredicted RBP28.16■■■□□ 2.1
RAB40B-207ENST00000572603 METTL22Q9BUU2 404 aaPredicted RBP28.16■■■□□ 2.1
RAB40B-207ENST00000572603 PXDNLA1KZ92 1463 aa28.15■■■□□ 2.1
RAB40B-207ENST00000572603 SETDB2Q96T68 719 aa28.15■■■□□ 2.1
RAB40B-207ENST00000572603 PARP3Q9Y6F1 533 aa28.15■■■□□ 2.1
RAB40B-207ENST00000572603 KIF16BQ96L93 1317 aa28.15■■■□□ 2.1
RAB40B-207ENST00000572603 SRCAPQ6ZRS2 3230 aa28.14■■■□□ 2.1
RAB40B-207ENST00000572603 LAMB2P55268 1798 aa28.14■■■□□ 2.1
RAB40B-207ENST00000572603 TNRC6CQ9HCJ0 1690 aaKnown RBP28.14■■■□□ 2.1
RAB40B-207ENST00000572603 F6X3S4 739 aa28.14■■■□□ 2.1
RAB40B-207ENST00000572603 DNAAF4Q8WXU2 420 aa28.14■■■□□ 2.1
RAB40B-207ENST00000572603 SERPINB2P05120 415 aa28.13■■■□□ 2.09
RAB40B-207ENST00000572603 NLRP10Q86W26 655 aa28.13■■■□□ 2.09
RAB40B-207ENST00000572603 MYD88Q99836 296 aa28.13■■■□□ 2.09
RAB40B-207ENST00000572603 NOB1Q9ULX3 412 aaKnown RBP28.13■■■□□ 2.09
RAB40B-207ENST00000572603 ATP5J2-PTCD1G3V325 749 aa28.12■■■□□ 2.09
RAB40B-207ENST00000572603 DDX60Q8IY21 1712 aaKnown RBP28.12■■■□□ 2.09
RAB40B-207ENST00000572603 IGKV5-2P06315 115 aa28.11■■■□□ 2.09
RAB40B-207ENST00000572603 TRIM28Q13263 835 aaKnown RBP28.11■■■□□ 2.09
RAB40B-207ENST00000572603 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
RAB40B-207ENST00000572603 SUSD4Q5VX71 490 aa28.11■■■□□ 2.09
RAB40B-207ENST00000572603 RCAN3Q9UKA8 241 aa28.11■■■□□ 2.09
RAB40B-207ENST00000572603 COL11A2P13942 1736 aaPredicted RBP28.11■■■□□ 2.09
RAB40B-207ENST00000572603 NTSR2O95665 410 aa28.1■■■□□ 2.09
RAB40B-207ENST00000572603 PRR5LQ6MZQ0 368 aa28.1■■■□□ 2.09
RAB40B-207ENST00000572603 ABCC12Q96J65 1359 aa28.1■■■□□ 2.09
RAB40B-207ENST00000572603 DLEC1Q9Y238 1755 aa28.09■■■□□ 2.09
RAB40B-207ENST00000572603 NBPF5PQ86XG9 351 aaPredicted RBP28.08■■■□□ 2.09
RAB40B-207ENST00000572603 FAM177BA6PVY3 158 aa28.07■■■□□ 2.08
RAB40B-207ENST00000572603 CWF19L2Q2TBE0 894 aaKnown RBP28.07■■■□□ 2.08
RAB40B-207ENST00000572603 BEND3Q5T5X7 828 aa28.07■■■□□ 2.08
RAB40B-207ENST00000572603 CNBD1Q8NA66 436 aa28.07■■■□□ 2.08
RAB40B-207ENST00000572603 ARHGAP45Q92619 1136 aa28.07■■■□□ 2.08
RAB40B-207ENST00000572603 RIC1Q4ADV7 1423 aa28.07■■■□□ 2.08
RAB40B-207ENST00000572603 NEURL1BA8MQ27 555 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms